{"id":"https://openalex.org/W2985294119","doi":"https://doi.org/10.18653/v1/d19-5701","title":"PharmaCoNER: Pharmacological Substances, Compounds and proteins Named Entity Recognition track","display_name":"PharmaCoNER: Pharmacological Substances, Compounds and proteins Named Entity Recognition track","publication_year":2019,"publication_date":"2019-01-01","ids":{"openalex":"https://openalex.org/W2985294119","doi":"https://doi.org/10.18653/v1/d19-5701","mag":"2985294119"},"language":"en","primary_location":{"id":"doi:10.18653/v1/d19-5701","is_oa":true,"landing_page_url":"https://doi.org/10.18653/v1/d19-5701","pdf_url":"https://www.aclweb.org/anthology/D19-5701.pdf","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of The 5th Workshop on BioNLP Open Shared Tasks","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.aclweb.org/anthology/D19-5701.pdf","any_repository_has_fulltext":null},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5102342307","display_name":"Aitor Gonzalez Agirre","orcid":null},"institutions":[{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]},{"id":"https://openalex.org/I4210089594","display_name":"Spanish National Cancer Research Centre","ror":"https://ror.org/00bvhmc43","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210089594"]},{"id":"https://openalex.org/I88155538","display_name":"Universidad de Navarra","ror":"https://ror.org/02rxc7m23","country_code":"ES","type":"education","lineage":["https://openalex.org/I88155538"]},{"id":"https://openalex.org/I884693733","display_name":"Chartered Institute of Management Accountants","ror":"https://ror.org/01kpf2x84","country_code":"GB","type":"other","lineage":["https://openalex.org/I884693733"]}],"countries":["ES","GB"],"is_corresponding":true,"raw_author_name":"Aitor Gonzalez Agirre","raw_affiliation_strings":["Centro Nacional de Investigaciones Oncol\u00f3gicas (CNIO) Barcelona Supercomputing Center (BSC)","University of Navarra","Center for Applied Medical Research (CIMA)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centro Nacional de Investigaciones Oncol\u00f3gicas (CNIO) Barcelona Supercomputing Center (BSC)","institution_ids":["https://openalex.org/I9617848","https://openalex.org/I4210089594","https://openalex.org/I2799803557"]},{"raw_affiliation_string":"University of Navarra","institution_ids":["https://openalex.org/I88155538"]},{"raw_affiliation_string":"Center for Applied Medical Research (CIMA)","institution_ids":["https://openalex.org/I884693733"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045479225","display_name":"Montserrat Marimon","orcid":"https://orcid.org/0000-0002-0211-8681"},"institutions":[{"id":"https://openalex.org/I884693733","display_name":"Chartered Institute of Management Accountants","ror":"https://ror.org/01kpf2x84","country_code":"GB","type":"other","lineage":["https://openalex.org/I884693733"]},{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]},{"id":"https://openalex.org/I88155538","display_name":"Universidad de Navarra","ror":"https://ror.org/02rxc7m23","country_code":"ES","type":"education","lineage":["https://openalex.org/I88155538"]},{"id":"https://openalex.org/I4210089594","display_name":"Spanish National Cancer Research Centre","ror":"https://ror.org/00bvhmc43","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210089594"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]}],"countries":["ES","GB"],"is_corresponding":false,"raw_author_name":"Montserrat Marimon","raw_affiliation_strings":["Centro Nacional de Investigaciones Oncol\u00f3gicas (CNIO) Barcelona Supercomputing Center (BSC)","University of Navarra","Center for Applied Medical Research (CIMA)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centro Nacional de Investigaciones Oncol\u00f3gicas (CNIO) Barcelona Supercomputing Center (BSC)","institution_ids":["https://openalex.org/I9617848","https://openalex.org/I4210089594","https://openalex.org/I2799803557"]},{"raw_affiliation_string":"University of Navarra","institution_ids":["https://openalex.org/I88155538"]},{"raw_affiliation_string":"Center for Applied Medical Research (CIMA)","institution_ids":["https://openalex.org/I884693733"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084488359","display_name":"Ander Intxaurrondo","orcid":"https://orcid.org/0000-0002-7465-6032"},"institutions":[{"id":"https://openalex.org/I884693733","display_name":"Chartered Institute of Management Accountants","ror":"https://ror.org/01kpf2x84","country_code":"GB","type":"other","lineage":["https://openalex.org/I884693733"]},{"id":"https://openalex.org/I4210089594","display_name":"Spanish National Cancer Research Centre","ror":"https://ror.org/00bvhmc43","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210089594"]},{"id":"https://openalex.org/I88155538","display_name":"Universidad de Navarra","ror":"https://ror.org/02rxc7m23","country_code":"ES","type":"education","lineage":["https://openalex.org/I88155538"]},{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]}],"countries":["ES","GB"],"is_corresponding":false,"raw_author_name":"Ander Intxaurrondo","raw_affiliation_strings":["Centro Nacional de Investigaciones Oncol\u00f3gicas (CNIO) Barcelona Supercomputing Center (BSC)","University of Navarra","Center for Applied Medical Research (CIMA)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centro Nacional de Investigaciones Oncol\u00f3gicas (CNIO) Barcelona Supercomputing Center (BSC)","institution_ids":["https://openalex.org/I9617848","https://openalex.org/I4210089594","https://openalex.org/I2799803557"]},{"raw_affiliation_string":"University of Navarra","institution_ids":["https://openalex.org/I88155538"]},{"raw_affiliation_string":"Center for Applied Medical Research (CIMA)","institution_ids":["https://openalex.org/I884693733"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027971106","display_name":"Obdulia Rabal","orcid":"https://orcid.org/0000-0002-3224-0987"},"institutions":[{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]},{"id":"https://openalex.org/I884693733","display_name":"Chartered Institute of Management Accountants","ror":"https://ror.org/01kpf2x84","country_code":"GB","type":"other","lineage":["https://openalex.org/I884693733"]},{"id":"https://openalex.org/I4210089594","display_name":"Spanish National Cancer Research Centre","ror":"https://ror.org/00bvhmc43","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210089594"]},{"id":"https://openalex.org/I88155538","display_name":"Universidad de Navarra","ror":"https://ror.org/02rxc7m23","country_code":"ES","type":"education","lineage":["https://openalex.org/I88155538"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]}],"countries":["ES","GB"],"is_corresponding":false,"raw_author_name":"Obdulia Rabal","raw_affiliation_strings":["Centro Nacional de Investigaciones Oncol\u00f3gicas (CNIO) Barcelona Supercomputing Center (BSC)","Center for Applied Medical Research (CIMA)","University of Navarra"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centro Nacional de Investigaciones Oncol\u00f3gicas (CNIO) Barcelona Supercomputing Center (BSC)","institution_ids":["https://openalex.org/I9617848","https://openalex.org/I4210089594","https://openalex.org/I2799803557"]},{"raw_affiliation_string":"Center for Applied Medical Research (CIMA)","institution_ids":["https://openalex.org/I884693733"]},{"raw_affiliation_string":"University of Navarra","institution_ids":["https://openalex.org/I88155538"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046596536","display_name":"Marta Villegas","orcid":"https://orcid.org/0000-0003-0711-0029"},"institutions":[{"id":"https://openalex.org/I88155538","display_name":"Universidad de Navarra","ror":"https://ror.org/02rxc7m23","country_code":"ES","type":"education","lineage":["https://openalex.org/I88155538"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]},{"id":"https://openalex.org/I884693733","display_name":"Chartered Institute of Management Accountants","ror":"https://ror.org/01kpf2x84","country_code":"GB","type":"other","lineage":["https://openalex.org/I884693733"]},{"id":"https://openalex.org/I4210089594","display_name":"Spanish National Cancer Research Centre","ror":"https://ror.org/00bvhmc43","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210089594"]},{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]}],"countries":["ES","GB"],"is_corresponding":false,"raw_author_name":"Marta Villegas","raw_affiliation_strings":["Centro Nacional de Investigaciones Oncol\u00f3gicas (CNIO) Barcelona Supercomputing Center (BSC)","University of Navarra","Center for Applied Medical Research (CIMA)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centro Nacional de Investigaciones Oncol\u00f3gicas (CNIO) Barcelona Supercomputing Center (BSC)","institution_ids":["https://openalex.org/I9617848","https://openalex.org/I4210089594","https://openalex.org/I2799803557"]},{"raw_affiliation_string":"University of Navarra","institution_ids":["https://openalex.org/I88155538"]},{"raw_affiliation_string":"Center for Applied Medical Research (CIMA)","institution_ids":["https://openalex.org/I884693733"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5007203127","display_name":"Martin Krallinger","orcid":"https://orcid.org/0000-0002-2646-8782"},"institutions":[{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]},{"id":"https://openalex.org/I88155538","display_name":"Universidad de Navarra","ror":"https://ror.org/02rxc7m23","country_code":"ES","type":"education","lineage":["https://openalex.org/I88155538"]},{"id":"https://openalex.org/I4210089594","display_name":"Spanish National Cancer Research Centre","ror":"https://ror.org/00bvhmc43","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210089594"]},{"id":"https://openalex.org/I884693733","display_name":"Chartered Institute of Management Accountants","ror":"https://ror.org/01kpf2x84","country_code":"GB","type":"other","lineage":["https://openalex.org/I884693733"]}],"countries":["ES","GB"],"is_corresponding":false,"raw_author_name":"Martin Krallinger","raw_affiliation_strings":["Centro Nacional de Investigaciones Oncol\u00f3gicas (CNIO) Barcelona Supercomputing Center (BSC)","Center for Applied Medical Research (CIMA)","University of Navarra"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centro Nacional de Investigaciones Oncol\u00f3gicas (CNIO) Barcelona Supercomputing Center (BSC)","institution_ids":["https://openalex.org/I9617848","https://openalex.org/I4210089594","https://openalex.org/I2799803557"]},{"raw_affiliation_string":"Center for Applied Medical Research (CIMA)","institution_ids":["https://openalex.org/I884693733"]},{"raw_affiliation_string":"University of Navarra","institution_ids":["https://openalex.org/I88155538"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5102342307"],"corresponding_institution_ids":["https://openalex.org/I2799803557","https://openalex.org/I4210089594","https://openalex.org/I88155538","https://openalex.org/I884693733","https://openalex.org/I9617848"],"apc_list":null,"apc_paid":null,"fwci":5.2987,"has_fulltext":true,"cited_by_count":85,"citation_normalized_percentile":{"value":0.96676989,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":100},"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"10"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9882000088691711,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13083","display_name":"Advanced Text Analysis Techniques","score":0.9595000147819519,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7399490475654602},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.7247639298439026},{"id":"https://openalex.org/keywords/snomed-ct","display_name":"SNOMED CT","score":0.6852173805236816},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.6722146272659302},{"id":"https://openalex.org/keywords/named-entity-recognition","display_name":"Named-entity recognition","score":0.6575497984886169},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.6149343252182007},{"id":"https://openalex.org/keywords/relevance","display_name":"Relevance (law)","score":0.5981950759887695},{"id":"https://openalex.org/keywords/search-engine-indexing","display_name":"Search engine indexing","score":0.5463070273399353},{"id":"https://openalex.org/keywords/identifier","display_name":"Identifier","score":0.5259702205657959},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.5187633037567139},{"id":"https://openalex.org/keywords/biomedical-text-mining","display_name":"Biomedical text mining","score":0.4606374204158783},{"id":"https://openalex.org/keywords/unique-identifier","display_name":"Unique identifier","score":0.43776601552963257},{"id":"https://openalex.org/keywords/standardization","display_name":"Standardization","score":0.43355119228363037},{"id":"https://openalex.org/keywords/information-extraction","display_name":"Information extraction","score":0.4242344796657562},{"id":"https://openalex.org/keywords/drug-reaction","display_name":"Drug reaction","score":0.4149303436279297},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.38762515783309937},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3407615125179291},{"id":"https://openalex.org/keywords/text-mining","display_name":"Text mining","score":0.2931656837463379},{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.1890372633934021},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.15722137689590454},{"id":"https://openalex.org/keywords/terminology","display_name":"Terminology","score":0.11009395122528076},{"id":"https://openalex.org/keywords/linguistics","display_name":"Linguistics","score":0.10019716620445251}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7399490475654602},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.7247639298439026},{"id":"https://openalex.org/C206497026","wikidata":"https://www.wikidata.org/wiki/Q1753883","display_name":"SNOMED CT","level":3,"score":0.6852173805236816},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.6722146272659302},{"id":"https://openalex.org/C2779135771","wikidata":"https://www.wikidata.org/wiki/Q403574","display_name":"Named-entity recognition","level":3,"score":0.6575497984886169},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.6149343252182007},{"id":"https://openalex.org/C158154518","wikidata":"https://www.wikidata.org/wiki/Q7310970","display_name":"Relevance (law)","level":2,"score":0.5981950759887695},{"id":"https://openalex.org/C75165309","wikidata":"https://www.wikidata.org/wiki/Q2258979","display_name":"Search engine indexing","level":2,"score":0.5463070273399353},{"id":"https://openalex.org/C154504017","wikidata":"https://www.wikidata.org/wiki/Q853614","display_name":"Identifier","level":2,"score":0.5259702205657959},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.5187633037567139},{"id":"https://openalex.org/C165141518","wikidata":"https://www.wikidata.org/wiki/Q4915126","display_name":"Biomedical text mining","level":3,"score":0.4606374204158783},{"id":"https://openalex.org/C119839945","wikidata":"https://www.wikidata.org/wiki/Q6545185","display_name":"Unique identifier","level":3,"score":0.43776601552963257},{"id":"https://openalex.org/C188087704","wikidata":"https://www.wikidata.org/wiki/Q369577","display_name":"Standardization","level":2,"score":0.43355119228363037},{"id":"https://openalex.org/C195807954","wikidata":"https://www.wikidata.org/wiki/Q1662562","display_name":"Information extraction","level":2,"score":0.4242344796657562},{"id":"https://openalex.org/C2993432071","wikidata":"https://www.wikidata.org/wiki/Q45959","display_name":"Drug reaction","level":3,"score":0.4149303436279297},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.38762515783309937},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3407615125179291},{"id":"https://openalex.org/C71472368","wikidata":"https://www.wikidata.org/wiki/Q676880","display_name":"Text mining","level":2,"score":0.2931656837463379},{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.1890372633934021},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.15722137689590454},{"id":"https://openalex.org/C547195049","wikidata":"https://www.wikidata.org/wiki/Q1725664","display_name":"Terminology","level":2,"score":0.11009395122528076},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.10019716620445251},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C118552586","wikidata":"https://www.wikidata.org/wiki/Q7867","display_name":"Psychiatry","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.18653/v1/d19-5701","is_oa":true,"landing_page_url":"https://doi.org/10.18653/v1/d19-5701","pdf_url":"https://www.aclweb.org/anthology/D19-5701.pdf","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of The 5th Workshop on BioNLP Open Shared Tasks","raw_type":"proceedings-article"}],"best_oa_location":{"id":"doi:10.18653/v1/d19-5701","is_oa":true,"landing_page_url":"https://doi.org/10.18653/v1/d19-5701","pdf_url":"https://www.aclweb.org/anthology/D19-5701.pdf","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of The 5th Workshop on BioNLP Open Shared Tasks","raw_type":"proceedings-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education","score":0.5199999809265137}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2985294119.pdf","grobid_xml":"https://content.openalex.org/works/W2985294119.grobid-xml"},"referenced_works_count":15,"referenced_works":["https://openalex.org/W8550301","https://openalex.org/W2099369363","https://openalex.org/W2114039834","https://openalex.org/W2122504306","https://openalex.org/W2128279348","https://openalex.org/W2135505477","https://openalex.org/W2145270227","https://openalex.org/W2149369282","https://openalex.org/W2170189740","https://openalex.org/W2250539671","https://openalex.org/W2252278859","https://openalex.org/W2610394652","https://openalex.org/W2775645290","https://openalex.org/W2949445525","https://openalex.org/W2963997788"],"related_works":["https://openalex.org/W2134429551","https://openalex.org/W2548624545","https://openalex.org/W2017675085","https://openalex.org/W4288094423","https://openalex.org/W2980250610","https://openalex.org/W2094591616","https://openalex.org/W4378419072","https://openalex.org/W4387606006","https://openalex.org/W2987255980","https://openalex.org/W2942364792"],"abstract_inverted_index":{"One":[0],"of":[1,6,52,80,125,140,149,218,228],"the":[2,77,92,154,164,206,216],"biomedical":[3,197,224],"entity":[4],"types":[5],"relevance":[7],"for":[8,24,122,221],"medicine":[9],"or":[10,40],"biosciences":[11],"are":[12],"chemical":[13,100],"compounds":[14],"and":[15,83,99,160,211,223],"drugs.":[16],"The":[17],"correct":[18],"detection":[19],"these":[20],"entities":[21,101],"is":[22,191],"critical":[23],"other":[25,72],"text":[26,198,225],"mining":[27,199,226],"applications":[28],"building":[29],"on":[30,96],"them,":[31],"such":[32],"as":[33],"adverse":[34],"drug-reaction":[35],"detection,":[36],"medicationrelated":[37],"fake":[38],"news":[39],"drug-target":[41],"extraction.":[42],"Although":[43],"a":[44,109,123,138,192],"significant":[45],"effort":[46],"was":[47],"made":[48,64],"to":[49,65,115,120],"detect":[50],"mentions":[51],"drugs/chemicals":[53,121],"in":[54,68,71,87,102,153,163,195],"English":[55],"texts,":[56],"so":[57],"far":[58],"only":[59],"very":[60,179],"limited":[61],"attempts":[62],"were":[63],"recognize":[66],"them":[67],"medical":[69,81,104,230],"documents":[70],"languages.":[73],"Taking":[74],"into":[75],"account":[76],"growing":[78],"amount":[79],"publications":[82],"clinical":[84,110,144,222],"records":[85],"written":[86],"Spanish,":[88],"we":[89,107,132],"have":[90],"organized":[91],"first":[93],"shared":[94],"task":[95],"detecting":[97],"drug":[98],"Spanish":[103,229],"documents.":[105,126],"Additionally,":[106],"included":[108],"concept-indexing":[111],"sub-track":[112,155,165],"asking":[113],"teams":[114,151,162,172],"return":[116],"SNOMED-CT":[117],"identifiers":[118],"related":[119],"collection":[124],"For":[127],"this":[128],"task,":[129],"named":[130],"PharmaCoNER,":[131],"generated":[133],"annotation":[134,208],"guidelines":[135],"together":[136],"with":[137,182],"corpus":[139,210],"1,000":[141],"manually":[142],"annotated":[143],"case":[145],"studies.":[146],"A":[147],"total":[148],"22":[150],"participated":[152],"1,":[156],"(77":[157],"system":[158,168],"runs),":[159],"7":[161],"2":[166],"(19":[167],"runs).":[169],"Top":[170],"scoring":[171],"used":[173],"sophisticated":[174],"deep":[175],"learning":[176],"approaches":[177],"yielding":[178],"competitive":[180],"re-sults":[181],"F-measures":[183],"above":[184],"0.91.":[185],"These":[186],"results":[187],"indicate":[188],"that":[189,205],"there":[190],"real":[193],"interest":[194],"promoting":[196],"efforts":[200],"beyond":[201],"English.":[202],"We":[203],"foresee":[204],"PharmaCoNER":[207],"guidelines,":[209],"participant":[212],"systems":[213,227],"will":[214],"foster":[215],"development":[217],"new":[219],"resources":[220],"data.":[231]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":7},{"year":2024,"cited_by_count":9},{"year":2023,"cited_by_count":9},{"year":2022,"cited_by_count":16},{"year":2021,"cited_by_count":17},{"year":2020,"cited_by_count":12},{"year":2019,"cited_by_count":13}],"updated_date":"2026-05-31T08:46:17.908082","created_date":"2025-10-10T00:00:00"}
