{"id":"https://openalex.org/W7166862481","doi":"https://doi.org/10.18653/v1/2026.acl-long.1655","title":"GenomeQA: Benchmarking General Large Language Models for Genome Sequence Understanding","display_name":"GenomeQA: Benchmarking General Large Language Models for Genome Sequence Understanding","publication_year":2026,"publication_date":"2026-01-01","ids":{"openalex":"https://openalex.org/W7166862481","doi":"https://doi.org/10.18653/v1/2026.acl-long.1655"},"language":null,"primary_location":{"id":"doi:10.18653/v1/2026.acl-long.1655","is_oa":true,"landing_page_url":"https://doi.org/10.18653/v1/2026.acl-long.1655","pdf_url":"https://aclanthology.org/2026.acl-long.1655.pdf","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 64th Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://aclanthology.org/2026.acl-long.1655.pdf","any_repository_has_fulltext":null},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5034040709","display_name":"Weicai Long","orcid":"https://orcid.org/0009-0009-3205-9537"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Weicai Long","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5139788369","display_name":"Yusen Hou","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Yusen Hou","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5139850776","display_name":"Junning Feng","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Junning Feng","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5139756385","display_name":"Houcheng su","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Houcheng su","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5139757557","display_name":"Shuo Yang","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Shuo Yang","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5139720040","display_name":"Donglin Xie","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Donglin Xie","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5139757308","display_name":"Yanlin Zhang","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Yanlin Zhang","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.90938643,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"35771","last_page":"35792"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.4083000123500824,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.4083000123500824,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.07769999653100967,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.057500001043081284,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.5270000100135803},{"id":"https://openalex.org/keywords/benchmarking","display_name":"Benchmarking","score":0.5120000243186951},{"id":"https://openalex.org/keywords/computational-linguistics","display_name":"Computational linguistics","score":0.49869999289512634},{"id":"https://openalex.org/keywords/association","display_name":"Association (psychology)","score":0.36800000071525574},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.3582000136375427},{"id":"https://openalex.org/keywords/computational-model","display_name":"Computational model","score":0.336899995803833}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6122999787330627},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.5270000100135803},{"id":"https://openalex.org/C86251818","wikidata":"https://www.wikidata.org/wiki/Q816754","display_name":"Benchmarking","level":2,"score":0.5120000243186951},{"id":"https://openalex.org/C155092808","wikidata":"https://www.wikidata.org/wiki/Q182557","display_name":"Computational linguistics","level":2,"score":0.49869999289512634},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.49799999594688416},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.45910000801086426},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4041000008583069},{"id":"https://openalex.org/C142853389","wikidata":"https://www.wikidata.org/wiki/Q744778","display_name":"Association (psychology)","level":2,"score":0.36800000071525574},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.3582000136375427},{"id":"https://openalex.org/C66024118","wikidata":"https://www.wikidata.org/wiki/Q1122506","display_name":"Computational model","level":2,"score":0.336899995803833},{"id":"https://openalex.org/C137293760","wikidata":"https://www.wikidata.org/wiki/Q3621696","display_name":"Language model","level":2,"score":0.3230000138282776},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.3203999996185303},{"id":"https://openalex.org/C197077220","wikidata":"https://www.wikidata.org/wiki/Q720988","display_name":"Human genome","level":4,"score":0.32019999623298645},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.30649998784065247},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.26919999718666077},{"id":"https://openalex.org/C195324797","wikidata":"https://www.wikidata.org/wiki/Q33742","display_name":"Natural language","level":2,"score":0.26489999890327454},{"id":"https://openalex.org/C24432333","wikidata":"https://www.wikidata.org/wiki/Q2068526","display_name":"Whole genome sequencing","level":4,"score":0.26100000739097595}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.18653/v1/2026.acl-long.1655","is_oa":true,"landing_page_url":"https://doi.org/10.18653/v1/2026.acl-long.1655","pdf_url":"https://aclanthology.org/2026.acl-long.1655.pdf","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 64th Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers)","raw_type":"proceedings-article"}],"best_oa_location":{"id":"doi:10.18653/v1/2026.acl-long.1655","is_oa":true,"landing_page_url":"https://doi.org/10.18653/v1/2026.acl-long.1655","pdf_url":"https://aclanthology.org/2026.acl-long.1655.pdf","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 64th Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers)","raw_type":"proceedings-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education","score":0.7584561109542847}],"awards":[],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320323539","display_name":"Ministry of Human Resources and Social Security","ror":"https://ror.org/01kjwqy11"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W7166862481.pdf","grobid_xml":"https://content.openalex.org/works/W7166862481.grobid-xml"},"referenced_works_count":0,"referenced_works":[],"related_works":[],"abstract_inverted_index":{"Weicai":[0],"Long,":[1],"Yusen":[2],"Hou,":[3],"Junning":[4],"Feng,":[5],"Houcheng":[6],"su,":[7],"Shuo":[8],"Yang,":[9],"Donglin":[10],"Xie,":[11],"Yanlin":[12],"Zhang.":[13],"Proceedings":[14],"of":[15,20],"the":[16,21],"64th":[17],"Annual":[18],"Meeting":[19],"Association":[22],"for":[23],"Computational":[24],"Linguistics":[25],"(Volume":[26],"1:":[27],"Long":[28],"Papers).":[29],"2026.":[30]},"counts_by_year":[],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2026-07-02T00:00:00"}
