{"id":"https://openalex.org/W2970227566","doi":"https://doi.org/10.1587/transinf.2018edp7268","title":"Multi-Level Attention Based BLSTM Neural Network for Biomedical Event Extraction","display_name":"Multi-Level Attention Based BLSTM Neural Network for Biomedical Event Extraction","publication_year":2019,"publication_date":"2019-08-31","ids":{"openalex":"https://openalex.org/W2970227566","doi":"https://doi.org/10.1587/transinf.2018edp7268","mag":"2970227566"},"language":"en","primary_location":{"id":"doi:10.1587/transinf.2018edp7268","is_oa":true,"landing_page_url":"https://doi.org/10.1587/transinf.2018edp7268","pdf_url":"https://www.jstage.jst.go.jp/article/transinf/E102.D/9/E102.D_2018EDP7268/_pdf","source":{"id":"https://openalex.org/S2486202937","display_name":"IEICE Transactions on Information and Systems","issn_l":"0916-8532","issn":["0916-8532","1745-1361"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4320800604","host_organization_name":"Institute of Electronics, Information and Communication Engineers","host_organization_lineage":["https://openalex.org/P4320800604"],"host_organization_lineage_names":["Institute of Electronics, Information and Communication Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEICE Transactions on Information and Systems","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://www.jstage.jst.go.jp/article/transinf/E102.D/9/E102.D_2018EDP7268/_pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5027800550","display_name":"Xinyu He","orcid":"https://orcid.org/0000-0002-0482-7430"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xinyu HE","raw_affiliation_strings":["Dalian University of Technology"],"affiliations":[{"raw_affiliation_string":"Dalian University of Technology","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082868235","display_name":"Lishuang Li","orcid":null},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lishuang LI","raw_affiliation_strings":["Dalian University of Technology"],"affiliations":[{"raw_affiliation_string":"Dalian University of Technology","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074833963","display_name":"Xingchen Song","orcid":"https://orcid.org/0009-0009-9516-5361"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xingchen SONG","raw_affiliation_strings":["Dalian University of Technology"],"affiliations":[{"raw_affiliation_string":"Dalian University of Technology","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046871248","display_name":"Degen Huang","orcid":"https://orcid.org/0000-0002-8860-7805"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Degen HUANG","raw_affiliation_strings":["Dalian University of Technology"],"affiliations":[{"raw_affiliation_string":"Dalian University of Technology","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5071943346","display_name":"Fuji Ren","orcid":"https://orcid.org/0000-0003-4860-9184"},"institutions":[{"id":"https://openalex.org/I922474255","display_name":"Tokushima University","ror":"https://ror.org/044vy1d05","country_code":"JP","type":"education","lineage":["https://openalex.org/I922474255"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Fuji REN","raw_affiliation_strings":["University of Tokushima"],"affiliations":[{"raw_affiliation_string":"University of Tokushima","institution_ids":["https://openalex.org/I922474255"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5027800550"],"corresponding_institution_ids":["https://openalex.org/I27357992"],"apc_list":null,"apc_paid":null,"fwci":1.1561,"has_fulltext":true,"cited_by_count":13,"citation_normalized_percentile":{"value":0.84460707,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"E102.D","issue":"9","first_page":"1842","last_page":"1850"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13083","display_name":"Advanced Text Analysis Techniques","score":0.9950000047683716,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8865683078765869},{"id":"https://openalex.org/keywords/sentence","display_name":"Sentence","score":0.6909390091896057},{"id":"https://openalex.org/keywords/event","display_name":"Event (particle physics)","score":0.6818496584892273},{"id":"https://openalex.org/keywords/dependency","display_name":"Dependency (UML)","score":0.6149774193763733},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6003819704055786},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.5700971484184265},{"id":"https://openalex.org/keywords/word","display_name":"Word (group theory)","score":0.5631271600723267},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.5435736775398254},{"id":"https://openalex.org/keywords/relationship-extraction","display_name":"Relationship extraction","score":0.5422282218933105},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.5053477883338928},{"id":"https://openalex.org/keywords/biomedical-text-mining","display_name":"Biomedical text mining","score":0.48952755331993103},{"id":"https://openalex.org/keywords/information-extraction","display_name":"Information extraction","score":0.4393787384033203},{"id":"https://openalex.org/keywords/key","display_name":"Key (lock)","score":0.4304206371307373},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.42117980122566223},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.36382877826690674},{"id":"https://openalex.org/keywords/text-mining","display_name":"Text mining","score":0.12837696075439453},{"id":"https://openalex.org/keywords/linguistics","display_name":"Linguistics","score":0.06578722596168518}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8865683078765869},{"id":"https://openalex.org/C2777530160","wikidata":"https://www.wikidata.org/wiki/Q41796","display_name":"Sentence","level":2,"score":0.6909390091896057},{"id":"https://openalex.org/C2779662365","wikidata":"https://www.wikidata.org/wiki/Q5416694","display_name":"Event (particle physics)","level":2,"score":0.6818496584892273},{"id":"https://openalex.org/C19768560","wikidata":"https://www.wikidata.org/wiki/Q320727","display_name":"Dependency (UML)","level":2,"score":0.6149774193763733},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6003819704055786},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.5700971484184265},{"id":"https://openalex.org/C90805587","wikidata":"https://www.wikidata.org/wiki/Q10944557","display_name":"Word (group theory)","level":2,"score":0.5631271600723267},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.5435736775398254},{"id":"https://openalex.org/C153604712","wikidata":"https://www.wikidata.org/wiki/Q7310755","display_name":"Relationship extraction","level":3,"score":0.5422282218933105},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.5053477883338928},{"id":"https://openalex.org/C165141518","wikidata":"https://www.wikidata.org/wiki/Q4915126","display_name":"Biomedical text mining","level":3,"score":0.48952755331993103},{"id":"https://openalex.org/C195807954","wikidata":"https://www.wikidata.org/wiki/Q1662562","display_name":"Information extraction","level":2,"score":0.4393787384033203},{"id":"https://openalex.org/C26517878","wikidata":"https://www.wikidata.org/wiki/Q228039","display_name":"Key (lock)","level":2,"score":0.4304206371307373},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.42117980122566223},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.36382877826690674},{"id":"https://openalex.org/C71472368","wikidata":"https://www.wikidata.org/wiki/Q676880","display_name":"Text mining","level":2,"score":0.12837696075439453},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.06578722596168518},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1587/transinf.2018edp7268","is_oa":true,"landing_page_url":"https://doi.org/10.1587/transinf.2018edp7268","pdf_url":"https://www.jstage.jst.go.jp/article/transinf/E102.D/9/E102.D_2018EDP7268/_pdf","source":{"id":"https://openalex.org/S2486202937","display_name":"IEICE Transactions on Information and Systems","issn_l":"0916-8532","issn":["0916-8532","1745-1361"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4320800604","host_organization_name":"Institute of Electronics, Information and Communication Engineers","host_organization_lineage":["https://openalex.org/P4320800604"],"host_organization_lineage_names":["Institute of Electronics, Information and Communication Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEICE Transactions on Information and Systems","raw_type":"journal-article"}],"best_oa_location":{"id":"doi:10.1587/transinf.2018edp7268","is_oa":true,"landing_page_url":"https://doi.org/10.1587/transinf.2018edp7268","pdf_url":"https://www.jstage.jst.go.jp/article/transinf/E102.D/9/E102.D_2018EDP7268/_pdf","source":{"id":"https://openalex.org/S2486202937","display_name":"IEICE Transactions on Information and Systems","issn_l":"0916-8532","issn":["0916-8532","1745-1361"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4320800604","host_organization_name":"Institute of Electronics, Information and Communication Engineers","host_organization_lineage":["https://openalex.org/P4320800604"],"host_organization_lineage_names":["Institute of Electronics, Information and Communication Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEICE Transactions on Information and Systems","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.7099999785423279,"display_name":"Quality Education","id":"https://metadata.un.org/sdg/4"}],"awards":[{"id":"https://openalex.org/G1231421488","display_name":null,"funder_award_id":"under","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2087396116","display_name":null,"funder_award_id":"China","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3046329477","display_name":null,"funder_award_id":"61672126","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3317480652","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5994120800","display_name":null,"funder_award_id":"Natural","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7918627069","display_name":null,"funder_award_id":"6167212","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2970227566.pdf","grobid_xml":"https://content.openalex.org/works/W2970227566.grobid-xml"},"referenced_works_count":19,"referenced_works":["https://openalex.org/W150863218","https://openalex.org/W1988622308","https://openalex.org/W2020487656","https://openalex.org/W2052947212","https://openalex.org/W2064675550","https://openalex.org/W2072167633","https://openalex.org/W2075655036","https://openalex.org/W2095705004","https://openalex.org/W2098722636","https://openalex.org/W2133564696","https://openalex.org/W2146864948","https://openalex.org/W2147527908","https://openalex.org/W2170953709","https://openalex.org/W2209992309","https://openalex.org/W2251771443","https://openalex.org/W2293023260","https://openalex.org/W2528700057","https://openalex.org/W2778973872","https://openalex.org/W2962965405"],"related_works":["https://openalex.org/W2805262146","https://openalex.org/W2064314529","https://openalex.org/W4379517534","https://openalex.org/W842810586","https://openalex.org/W4319940250","https://openalex.org/W2352298027","https://openalex.org/W2092919065","https://openalex.org/W3138801416","https://openalex.org/W4236762297","https://openalex.org/W4379379356"],"abstract_inverted_index":{"Biomedical":[0],"event":[1,27,87,162],"extraction":[2],"is":[3,49],"an":[4,150],"important":[5],"and":[6,20,43,71,116,134],"challenging":[7],"task":[8],"in":[9,113],"Information":[10],"Extraction,":[11],"which":[12,37,89,107,121,164],"plays":[13],"a":[14,77,99,114],"key":[15],"role":[16],"for":[17,86],"medicine":[18],"research":[19],"disease":[21],"prevention.":[22],"Most":[23],"of":[24,111,125,152,160],"the":[25,57,109,117,123,155],"existing":[26],"detection":[28],"methods":[29,36],"are":[30],"based":[31],"on":[32,40,154],"shallow":[33],"machine":[34],"learning":[35],"mainly":[38],"rely":[39],"domain":[41],"knowledge":[42],"elaborately":[44],"designed":[45],"features.":[46],"Another":[47],"challenge":[48],"that":[50,146],"some":[51],"crucial":[52],"information":[53],"as":[54,56],"well":[55],"interactions":[58],"among":[59],"words":[60,70,112],"or":[61],"arguments":[62],"may":[63],"be":[64],"ignored":[65],"since":[66],"most":[67],"works":[68],"treat":[69],"sentences":[72],"equally.":[73],"Therefore,":[74],"we":[75,97,129],"employ":[76],"Bidirectional":[78],"Long":[79],"Short":[80],"Term":[81],"Memory":[82],"(BLSTM)":[83],"neural":[84],"network":[85],"extraction,":[88,163],"can":[90],"skip":[91],"handcrafted":[92],"complex":[93],"feature":[94],"extraction.":[95],"Furthermore,":[96],"propose":[98],"multi-level":[100],"attention":[101,106,120],"mechanism,":[102],"including":[103],"word":[104,132],"level":[105,119],"determines":[108,122],"importance":[110,124],"sentence,":[115],"sentence":[118,136],"relevant":[126],"arguments.":[127],"Finally,":[128],"train":[130],"dependency":[131],"embeddings":[133],"add":[135],"vectors":[137],"to":[138],"enrich":[139],"semantic":[140],"information.":[141],"The":[142],"experimental":[143],"results":[144],"show":[145],"our":[147],"model":[148],"achieves":[149],"F-score":[151],"59.61%":[153],"commonly":[156],"used":[157],"dataset":[158],"(MLEE)":[159],"biomedical":[161],"outperforms":[165],"other":[166],"state-of-the-art":[167],"methods.":[168]},"counts_by_year":[{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":3}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
