{"id":"https://openalex.org/W2786191679","doi":"https://doi.org/10.1587/transinf.2017edp7232","title":"An Active Transfer Learning Framework for Protein-Protein Interaction Extraction","display_name":"An Active Transfer Learning Framework for Protein-Protein Interaction Extraction","publication_year":2018,"publication_date":"2018-01-01","ids":{"openalex":"https://openalex.org/W2786191679","doi":"https://doi.org/10.1587/transinf.2017edp7232","mag":"2786191679"},"language":"en","primary_location":{"id":"doi:10.1587/transinf.2017edp7232","is_oa":true,"landing_page_url":"https://doi.org/10.1587/transinf.2017edp7232","pdf_url":"https://www.jstage.jst.go.jp/article/transinf/E101.D/2/E101.D_2017EDP7232/_pdf","source":{"id":"https://openalex.org/S2486202937","display_name":"IEICE Transactions on Information and Systems","issn_l":"0916-8532","issn":["0916-8532","1745-1361"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4320800604","host_organization_name":"Institute of Electronics, Information and Communication Engineers","host_organization_lineage":["https://openalex.org/P4320800604"],"host_organization_lineage_names":["Institute of Electronics, Information and Communication Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEICE Transactions on Information and Systems","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://www.jstage.jst.go.jp/article/transinf/E101.D/2/E101.D_2017EDP7232/_pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5082868235","display_name":"Lishuang Li","orcid":null},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Lishuang LI","raw_affiliation_strings":["Dalian University of Technology"],"affiliations":[{"raw_affiliation_string":"Dalian University of Technology","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027800550","display_name":"Xinyu He","orcid":"https://orcid.org/0000-0002-0482-7430"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xinyu HE","raw_affiliation_strings":["Dalian University of Technology"],"affiliations":[{"raw_affiliation_string":"Dalian University of Technology","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102300838","display_name":"Jieqiong Zheng","orcid":null},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jieqiong ZHENG","raw_affiliation_strings":["Dalian University of Technology"],"affiliations":[{"raw_affiliation_string":"Dalian University of Technology","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046871248","display_name":"Degen Huang","orcid":"https://orcid.org/0000-0002-8860-7805"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Degen HUANG","raw_affiliation_strings":["Dalian University of Technology"],"affiliations":[{"raw_affiliation_string":"Dalian University of Technology","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5071943346","display_name":"Fuji Ren","orcid":"https://orcid.org/0000-0003-4860-9184"},"institutions":[{"id":"https://openalex.org/I922474255","display_name":"Tokushima University","ror":"https://ror.org/044vy1d05","country_code":"JP","type":"education","lineage":["https://openalex.org/I922474255"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Fuji REN","raw_affiliation_strings":["University of Tokushima"],"affiliations":[{"raw_affiliation_string":"University of Tokushima","institution_ids":["https://openalex.org/I922474255"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5082868235"],"corresponding_institution_ids":["https://openalex.org/I27357992"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.00638193,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"E101.D","issue":"2","first_page":"504","last_page":"511"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9761000275611877,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.975600004196167,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8942910432815552},{"id":"https://openalex.org/keywords/transfer-of-learning","display_name":"Transfer of learning","score":0.7641015648841858},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6014026403427124},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.5888299942016602},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.5532532930374146},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.5205879807472229},{"id":"https://openalex.org/keywords/labeled-data","display_name":"Labeled data","score":0.499997615814209},{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.4988858699798584},{"id":"https://openalex.org/keywords/transfer","display_name":"Transfer (computing)","score":0.44567960500717163},{"id":"https://openalex.org/keywords/active-learning","display_name":"Active learning (machine learning)","score":0.42320379614830017},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3518561124801636}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8942910432815552},{"id":"https://openalex.org/C150899416","wikidata":"https://www.wikidata.org/wiki/Q1820378","display_name":"Transfer of learning","level":2,"score":0.7641015648841858},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6014026403427124},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.5888299942016602},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.5532532930374146},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.5205879807472229},{"id":"https://openalex.org/C2776145971","wikidata":"https://www.wikidata.org/wiki/Q30673951","display_name":"Labeled data","level":2,"score":0.499997615814209},{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.4988858699798584},{"id":"https://openalex.org/C2776175482","wikidata":"https://www.wikidata.org/wiki/Q1195816","display_name":"Transfer (computing)","level":2,"score":0.44567960500717163},{"id":"https://openalex.org/C77967617","wikidata":"https://www.wikidata.org/wiki/Q4677561","display_name":"Active learning (machine learning)","level":2,"score":0.42320379614830017},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3518561124801636},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1587/transinf.2017edp7232","is_oa":true,"landing_page_url":"https://doi.org/10.1587/transinf.2017edp7232","pdf_url":"https://www.jstage.jst.go.jp/article/transinf/E101.D/2/E101.D_2017EDP7232/_pdf","source":{"id":"https://openalex.org/S2486202937","display_name":"IEICE Transactions on Information and Systems","issn_l":"0916-8532","issn":["0916-8532","1745-1361"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4320800604","host_organization_name":"Institute of Electronics, Information and Communication Engineers","host_organization_lineage":["https://openalex.org/P4320800604"],"host_organization_lineage_names":["Institute of Electronics, Information and Communication Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEICE Transactions on Information and Systems","raw_type":"journal-article"}],"best_oa_location":{"id":"doi:10.1587/transinf.2017edp7232","is_oa":true,"landing_page_url":"https://doi.org/10.1587/transinf.2017edp7232","pdf_url":"https://www.jstage.jst.go.jp/article/transinf/E101.D/2/E101.D_2017EDP7232/_pdf","source":{"id":"https://openalex.org/S2486202937","display_name":"IEICE Transactions on Information and Systems","issn_l":"0916-8532","issn":["0916-8532","1745-1361"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4320800604","host_organization_name":"Institute of Electronics, Information and Communication Engineers","host_organization_lineage":["https://openalex.org/P4320800604"],"host_organization_lineage_names":["Institute of Electronics, Information and Communication Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEICE Transactions on Information and Systems","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1231421488","display_name":null,"funder_award_id":"under","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2087396116","display_name":null,"funder_award_id":"China","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3046329477","display_name":null,"funder_award_id":"61672126","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3317480652","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5994120800","display_name":null,"funder_award_id":"Natural","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6482782238","display_name":null,"funder_award_id":"61672127","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7918627069","display_name":null,"funder_award_id":"6167212","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G873187850","display_name":null,"funder_award_id":"61173101","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2786191679.pdf","grobid_xml":"https://content.openalex.org/works/W2786191679.grobid-xml"},"referenced_works_count":17,"referenced_works":["https://openalex.org/W1528361845","https://openalex.org/W1599935123","https://openalex.org/W1969114498","https://openalex.org/W1972969301","https://openalex.org/W1987818105","https://openalex.org/W1996787131","https://openalex.org/W2032536435","https://openalex.org/W2036043322","https://openalex.org/W2049118507","https://openalex.org/W2097960255","https://openalex.org/W2122838776","https://openalex.org/W2162576431","https://openalex.org/W2166474856","https://openalex.org/W2169974160","https://openalex.org/W2213679718","https://openalex.org/W2333024294","https://openalex.org/W3035219538"],"related_works":["https://openalex.org/W2090763504","https://openalex.org/W148178222","https://openalex.org/W2104657898","https://openalex.org/W1948992892","https://openalex.org/W1886884218","https://openalex.org/W3193920202","https://openalex.org/W2949671220","https://openalex.org/W4318813552","https://openalex.org/W2576964996","https://openalex.org/W4390832402"],"abstract_inverted_index":{"Protein-Protein":[0],"Interaction":[1],"Extraction":[2],"(PPIE)":[3],"from":[4,55],"biomedical":[5,12],"literatures":[6],"is":[7,41,69,75,111,133],"an":[8,65,102],"important":[9],"task":[10],"in":[11,24,154],"text":[13],"mining":[14],"and":[15,58,127,152],"has":[16],"achieved":[17],"great":[18],"success":[19],"on":[20,96,116,135],"public":[21],"datasets.":[22],"However,":[23],"real-world":[25],"applications,":[26],"the":[27,45,79,85,97,108,130,143,158],"existing":[28],"PPI":[29,119],"extraction":[30],"methods":[31,53],"are":[32],"limited":[33],"to":[34,43,77,83],"label":[35],"effort.":[36],"Therefore,":[37],"transfer":[38,51,57,87,100],"learning":[39,52,106],"method":[40,124],"applied":[42],"reduce":[44],"cost":[46],"of":[47,81,99,160],"manual":[48],"labeling.":[49],"Current":[50],"suffer":[54],"negative":[56,86],"lower":[59],"performance.":[60],"To":[61,92],"tackle":[62],"this":[63],"problem,":[64],"improved":[66,109],"TrAdaBoost":[67,82,110,126,151],"algorithm":[68],"proposed,":[70],"that":[71,122,142],"is,":[72],"relative":[73],"distribution":[74],"introduced":[76],"initialize":[78],"weights":[80],"overcome":[84],"caused":[88],"by":[89],"domain":[90],"differences.":[91],"make":[93],"further":[94],"improvement":[95],"performance":[98,149],"learning,":[101],"approach":[103],"combining":[104],"active":[105],"with":[107],"presented.":[112],"The":[113],"experimental":[114],"results":[115],"publicly":[117],"available":[118],"corpora":[120],"show":[121],"our":[123,161],"outperforms":[125],"SVM":[128],"when":[129],"labeled":[131],"data":[132],"insufficient,and":[134],"document":[136],"classification":[137],"corpora,":[138],"it":[139],"also":[140],"illustrates":[141],"proposed":[144],"approaches":[145],"can":[146],"achieve":[147],"better":[148],"than":[150],"TPTSVM":[153],"final,":[155],"which":[156],"verifies":[157],"effectiveness":[159],"methods.":[162]},"counts_by_year":[],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
