{"id":"https://openalex.org/W4406159289","doi":"https://doi.org/10.1587/transfun.2024eal2053","title":"Automatic Classification of Human Chromosome Shapes using Convolutional Neural Network Models","display_name":"Automatic Classification of Human Chromosome Shapes using Convolutional Neural Network Models","publication_year":2025,"publication_date":"2025-01-08","ids":{"openalex":"https://openalex.org/W4406159289","doi":"https://doi.org/10.1587/transfun.2024eal2053"},"language":"en","primary_location":{"id":"doi:10.1587/transfun.2024eal2053","is_oa":true,"landing_page_url":"https://doi.org/10.1587/transfun.2024eal2053","pdf_url":"https://www.jstage.jst.go.jp/article/transfun/advpub/0/advpub_2024EAL2053/_pdf","source":{"id":"https://openalex.org/S166990724","display_name":"IEICE Transactions on Fundamentals of Electronics Communications and Computer Sciences","issn_l":"0916-8508","issn":["0916-8508","1745-1337"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4320800604","host_organization_name":"Institute of Electronics, Information and Communication Engineers","host_organization_lineage":["https://openalex.org/P4320800604"],"host_organization_lineage_names":["Institute of Electronics, Information and Communication Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEICE Transactions on Fundamentals of Electronics, Communications and Computer Sciences","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://www.jstage.jst.go.jp/article/transfun/advpub/0/advpub_2024EAL2053/_pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5010982285","display_name":"Shinya Matsumoto","orcid":"https://orcid.org/0000-0001-5719-9709"},"institutions":[{"id":"https://openalex.org/I69740276","display_name":"Tokyo Metropolitan University","ror":"https://ror.org/00ws30h19","country_code":"JP","type":"education","lineage":["https://openalex.org/I69740276"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Shinya MATSUMOTO","raw_affiliation_strings":["Department of Electrical Engineering and Computer Science, Faculty of Systems Design, Tokyo Metropolitan University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical Engineering and Computer Science, Faculty of Systems Design, Tokyo Metropolitan University","institution_ids":["https://openalex.org/I69740276"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050111500","display_name":"Daiki Ikemoto","orcid":null},"institutions":[{"id":"https://openalex.org/I69740276","display_name":"Tokyo Metropolitan University","ror":"https://ror.org/00ws30h19","country_code":"JP","type":"education","lineage":["https://openalex.org/I69740276"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Daiki IKEMOTO","raw_affiliation_strings":["Department of Electrical Engineering and Computer Science, Faculty of Systems Design, Tokyo Metropolitan University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical Engineering and Computer Science, Faculty of Systems Design, Tokyo Metropolitan University","institution_ids":["https://openalex.org/I69740276"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074203320","display_name":"Takuya Abe","orcid":"https://orcid.org/0000-0001-5298-082X"},"institutions":[{"id":"https://openalex.org/I85324120","display_name":"Tohoku Medical and Pharmaceutical University","ror":"https://ror.org/0264zxa45","country_code":"JP","type":"education","lineage":["https://openalex.org/I85324120"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Takuya ABE","raw_affiliation_strings":["Division of Biochemistry, Faculty of Pharmaceutical Sciences, Tohoku Medical and Pharmaceutical University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Biochemistry, Faculty of Pharmaceutical Sciences, Tohoku Medical and Pharmaceutical University","institution_ids":["https://openalex.org/I85324120"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039273761","display_name":"Kan Okubo","orcid":"https://orcid.org/0000-0002-2924-7811"},"institutions":[{"id":"https://openalex.org/I69740276","display_name":"Tokyo Metropolitan University","ror":"https://ror.org/00ws30h19","country_code":"JP","type":"education","lineage":["https://openalex.org/I69740276"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Kan OKUBO","raw_affiliation_strings":["Department of Electrical Engineering and Computer Science, Faculty of Systems Design, Tokyo Metropolitan University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical Engineering and Computer Science, Faculty of Systems Design, Tokyo Metropolitan University","institution_ids":["https://openalex.org/I69740276"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5103076466","display_name":"Kiyoshi Nishikawa","orcid":"https://orcid.org/0009-0006-3851-8472"},"institutions":[{"id":"https://openalex.org/I69740276","display_name":"Tokyo Metropolitan University","ror":"https://ror.org/00ws30h19","country_code":"JP","type":"education","lineage":["https://openalex.org/I69740276"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Kiyoshi NISHIKAWA","raw_affiliation_strings":["Department of Electrical Engineering and Computer Science, Faculty of Systems Design, Tokyo Metropolitan University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical Engineering and Computer Science, Faculty of Systems Design, Tokyo Metropolitan University","institution_ids":["https://openalex.org/I69740276"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.9736,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.71408597,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":97},"biblio":{"volume":"E108.A","issue":"7","first_page":"991","last_page":"995"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9883000254631042,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/sister-chromatids","display_name":"Sister chromatids","score":0.8610568046569824},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6973577737808228},{"id":"https://openalex.org/keywords/convolutional-neural-network","display_name":"Convolutional neural network","score":0.6767144203186035},{"id":"https://openalex.org/keywords/chromosome","display_name":"Chromosome","score":0.5987170934677124},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5638435482978821},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.512908935546875},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.42020896077156067},{"id":"https://openalex.org/keywords/concordance","display_name":"Concordance","score":0.4109118580818176},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.14422419667243958},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.11963123083114624}],"concepts":[{"id":"https://openalex.org/C8502773","wikidata":"https://www.wikidata.org/wiki/Q2066168","display_name":"Sister chromatids","level":4,"score":0.8610568046569824},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6973577737808228},{"id":"https://openalex.org/C81363708","wikidata":"https://www.wikidata.org/wiki/Q17084460","display_name":"Convolutional neural network","level":2,"score":0.6767144203186035},{"id":"https://openalex.org/C30481170","wikidata":"https://www.wikidata.org/wiki/Q37748","display_name":"Chromosome","level":3,"score":0.5987170934677124},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5638435482978821},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.512908935546875},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.42020896077156067},{"id":"https://openalex.org/C160798450","wikidata":"https://www.wikidata.org/wiki/Q4230870","display_name":"Concordance","level":2,"score":0.4109118580818176},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.14422419667243958},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.11963123083114624},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1587/transfun.2024eal2053","is_oa":true,"landing_page_url":"https://doi.org/10.1587/transfun.2024eal2053","pdf_url":"https://www.jstage.jst.go.jp/article/transfun/advpub/0/advpub_2024EAL2053/_pdf","source":{"id":"https://openalex.org/S166990724","display_name":"IEICE Transactions on Fundamentals of Electronics Communications and Computer Sciences","issn_l":"0916-8508","issn":["0916-8508","1745-1337"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4320800604","host_organization_name":"Institute of Electronics, Information and Communication Engineers","host_organization_lineage":["https://openalex.org/P4320800604"],"host_organization_lineage_names":["Institute of Electronics, Information and Communication Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEICE Transactions on Fundamentals of Electronics, Communications and Computer Sciences","raw_type":"journal-article"}],"best_oa_location":{"id":"doi:10.1587/transfun.2024eal2053","is_oa":true,"landing_page_url":"https://doi.org/10.1587/transfun.2024eal2053","pdf_url":"https://www.jstage.jst.go.jp/article/transfun/advpub/0/advpub_2024EAL2053/_pdf","source":{"id":"https://openalex.org/S166990724","display_name":"IEICE Transactions on Fundamentals of Electronics Communications and Computer Sciences","issn_l":"0916-8508","issn":["0916-8508","1745-1337"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4320800604","host_organization_name":"Institute of Electronics, Information and Communication Engineers","host_organization_lineage":["https://openalex.org/P4320800604"],"host_organization_lineage_names":["Institute of Electronics, Information and Communication Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEICE Transactions on Fundamentals of Electronics, Communications and Computer Sciences","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3707142320","display_name":"CNN \u3092\u7528\u3044\u305f\u9ad8\u7cbe\u7d30\u753b\u50cf\u306b\u5bfe\u3059\u308b\u7269\u4f53\u8a8d\u8b58\u306e\u7cbe\u5ea6\u5411\u4e0a\u306b\u95a2\u3059\u308b\u7814\u7a76","funder_award_id":"22K12170","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"}],"funders":[{"id":"https://openalex.org/F4320334764","display_name":"Japan Society for the Promotion of Science","ror":"https://ror.org/00hhkn466"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4406159289.pdf","grobid_xml":"https://content.openalex.org/works/W4406159289.grobid-xml"},"referenced_works_count":29,"referenced_works":["https://openalex.org/W1686810756","https://openalex.org/W2070624526","https://openalex.org/W2097117768","https://openalex.org/W2101926813","https://openalex.org/W2119799188","https://openalex.org/W2128885131","https://openalex.org/W2134327202","https://openalex.org/W2173269264","https://openalex.org/W2183341477","https://openalex.org/W2194775991","https://openalex.org/W2519730393","https://openalex.org/W2549139847","https://openalex.org/W2618530766","https://openalex.org/W2883780447","https://openalex.org/W2946948417","https://openalex.org/W2955425717","https://openalex.org/W2963163009","https://openalex.org/W2963446712","https://openalex.org/W2963918968","https://openalex.org/W2964137095","https://openalex.org/W3014716126","https://openalex.org/W3097933861","https://openalex.org/W3159196909","https://openalex.org/W4210506859","https://openalex.org/W4319311765","https://openalex.org/W4379381024","https://openalex.org/W4383820844","https://openalex.org/W4387710924","https://openalex.org/W4394670654"],"related_works":["https://openalex.org/W1601684588","https://openalex.org/W2108427450","https://openalex.org/W2104328188","https://openalex.org/W648938440","https://openalex.org/W2915108716","https://openalex.org/W4220795960","https://openalex.org/W2789177613","https://openalex.org/W2396330467","https://openalex.org/W1517024399","https://openalex.org/W2486760758"],"abstract_inverted_index":{"Metaphase":[0],"chromosome":[1,96],"classifications":[2],"based":[3],"on":[4],"the":[5,15,18,46,67],"positional":[6],"relationship":[7],"between":[8],"sister":[9,23],"chromatids":[10,24],"are":[11],"used":[12],"to":[13,44],"evaluate":[14],"function":[16],"of":[17,66,76],"cohesin":[19],"complex,":[20],"which":[21,35],"tethers":[22],"until":[25],"cell":[26],"division.":[27],"Currently,":[28],"classification":[29],"is":[30,36],"manually":[31],"performed":[32],"by":[33],"researchers,":[34],"time":[37],"consuming":[38],"and":[39,83],"biased.":[40],"This":[41],"study":[42],"aims":[43],"automate":[45],"analysis":[47],"using":[48],"multiple":[49],"convolutional":[50],"neural":[51],"network":[52],"(CNN)-trained":[53],"models.":[54],"By":[55],"improving":[56],"our":[57],"prototype":[58],"model":[59],"with":[60],"a":[61,72,80],"73.1%":[62],"concordance":[63,74],"rate,":[64],"one":[65],"proposed":[68],"new":[69],"models":[70,92],"achieved":[71],"maximum":[73],"rate":[75],"93.33%":[77],"after":[78],"applying":[79],"fine-tuning":[81],"method":[82],"ensemble":[84],"learning":[85],"method.":[86],"The":[87],"results":[88],"suggest":[89],"that":[90],"CNN-based":[91],"can":[93],"automatically":[94],"classify":[95],"shapes.":[97]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1}],"updated_date":"2026-07-13T07:31:44.756512","created_date":"2025-10-10T00:00:00"}
