{"id":"https://openalex.org/W4360591931","doi":"https://doi.org/10.15302/j-qb-023-0327","title":"Empowering beginners in bioinformatics with ChatGPT","display_name":"Empowering beginners in bioinformatics with ChatGPT","publication_year":2023,"publication_date":"2023-03-22","ids":{"openalex":"https://openalex.org/W4360591931","doi":"https://doi.org/10.15302/j-qb-023-0327","pmid":"https://pubmed.ncbi.nlm.nih.gov/37378043"},"language":"en","primary_location":{"id":"doi:10.15302/j-qb-023-0327","is_oa":true,"landing_page_url":"https://doi.org/10.15302/j-qb-023-0327","pdf_url":"https://journal.hep.com.cn/qb/EN/PDF/10.15302/J-QB-023-0327","source":{"id":"https://openalex.org/S4210172333","display_name":"Quantitative Biology","issn_l":"2095-4689","issn":["2095-4689","2095-4697"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Quantitative Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journal.hep.com.cn/qb/EN/PDF/10.15302/J-QB-023-0327","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5032886193","display_name":"Evelyn Shue","orcid":null},"institutions":[{"id":"https://openalex.org/I12097938","display_name":"West Virginia University","ror":"https://ror.org/011vxgd24","country_code":"US","type":"education","lineage":["https://openalex.org/I12097938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Evelyn Shue","raw_affiliation_strings":["<!--1--> Department of Microbiology Immunology &amp; Cell Biology West Virginia University Morgantown WV 26506 USA","1. Department of Microbiology, Immunology & Cell Biology, West Virginia University, Morgantown, WV 26506, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"<!--1--> Department of Microbiology Immunology &amp; Cell Biology West Virginia University Morgantown WV 26506 USA","institution_ids":["https://openalex.org/I12097938"]},{"raw_affiliation_string":"1. Department of Microbiology, Immunology & Cell Biology, West Virginia University, Morgantown, WV 26506, USA","institution_ids":["https://openalex.org/I12097938"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100418924","display_name":"Li Liu","orcid":"https://orcid.org/0000-0003-4002-7497"},"institutions":[{"id":"https://openalex.org/I55732556","display_name":"Arizona State University","ror":"https://ror.org/03efmqc40","country_code":"US","type":"education","lineage":["https://openalex.org/I55732556"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Li Liu","raw_affiliation_strings":["<!--2--> College of Health Solutions Arizona State University Phoenix AZ 85004 USA","<!--3--> Biodesign Institute Arizona State University Tempe AZ 85281 USA","2. College of Health Solutions, Arizona State University, Phoenix, AZ 85004, USA","3. Biodesign Institute, Arizona State University, Tempe, AZ 85281, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"<!--2--> College of Health Solutions Arizona State University Phoenix AZ 85004 USA","institution_ids":["https://openalex.org/I55732556"]},{"raw_affiliation_string":"<!--3--> Biodesign Institute Arizona State University Tempe AZ 85281 USA","institution_ids":["https://openalex.org/I55732556"]},{"raw_affiliation_string":"2. College of Health Solutions, Arizona State University, Phoenix, AZ 85004, USA","institution_ids":["https://openalex.org/I55732556"]},{"raw_affiliation_string":"3. Biodesign Institute, Arizona State University, Tempe, AZ 85281, USA","institution_ids":["https://openalex.org/I55732556"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101499755","display_name":"Bingxin Li","orcid":"https://orcid.org/0000-0003-2833-4291"},"institutions":[{"id":"https://openalex.org/I12097938","display_name":"West Virginia University","ror":"https://ror.org/011vxgd24","country_code":"US","type":"education","lineage":["https://openalex.org/I12097938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Bingxin Li","raw_affiliation_strings":["<!--4--> Finance Department John Chambers College of Business and Economics West Virginia University Morgantown WV 26506 USA","4. Finance Department, John Chambers College of Business and Economics, West Virginia University, Morgantown, WV 26506, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"<!--4--> Finance Department John Chambers College of Business and Economics West Virginia University Morgantown WV 26506 USA","institution_ids":["https://openalex.org/I12097938"]},{"raw_affiliation_string":"4. Finance Department, John Chambers College of Business and Economics, West Virginia University, Morgantown, WV 26506, USA","institution_ids":["https://openalex.org/I12097938"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084102031","display_name":"Zifeng Feng","orcid":"https://orcid.org/0000-0001-7849-7625"},"institutions":[{"id":"https://openalex.org/I164936912","display_name":"The University of Texas at El Paso","ror":"https://ror.org/04d5vba33","country_code":"US","type":"education","lineage":["https://openalex.org/I164936912"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Zifeng Feng","raw_affiliation_strings":["<!--5--> Department of Economics and Finance The University of Texas at El Paso El Paso TX 79902 USA","5. Department of Economics and Finance, The University of Texas at El Paso, El Paso, TX 79902, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"<!--5--> Department of Economics and Finance The University of Texas at El Paso El Paso TX 79902 USA","institution_ids":["https://openalex.org/I164936912"]},{"raw_affiliation_string":"5. Department of Economics and Finance, The University of Texas at El Paso, El Paso, TX 79902, USA","institution_ids":["https://openalex.org/I164936912"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100354039","display_name":"Xin Li","orcid":"https://orcid.org/0000-0003-2067-2763"},"institutions":[{"id":"https://openalex.org/I12097938","display_name":"West Virginia University","ror":"https://ror.org/011vxgd24","country_code":"US","type":"education","lineage":["https://openalex.org/I12097938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xin Li","raw_affiliation_strings":["<!--6--> Lane Department of Computer Science and Electrical Engineering West Virginia University Morgantown WV 26506 USA","6. Lane Department of Computer Science and Electrical Engineering, West Virginia University, Morgantown, WV 26506, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"<!--6--> Lane Department of Computer Science and Electrical Engineering West Virginia University Morgantown WV 26506 USA","institution_ids":["https://openalex.org/I12097938"]},{"raw_affiliation_string":"6. Lane Department of Computer Science and Electrical Engineering, West Virginia University, Morgantown, WV 26506, USA","institution_ids":["https://openalex.org/I12097938"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5073225177","display_name":"Gangqing Hu","orcid":"https://orcid.org/0000-0001-5453-6888"},"institutions":[{"id":"https://openalex.org/I12097938","display_name":"West Virginia University","ror":"https://ror.org/011vxgd24","country_code":"US","type":"education","lineage":["https://openalex.org/I12097938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Gangqing Hu","raw_affiliation_strings":["<!--1--> Department of Microbiology Immunology &amp; Cell Biology West Virginia University Morgantown WV 26506 USA","1. Department of Microbiology, Immunology & Cell Biology, West Virginia University, Morgantown, WV 26506, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"<!--1--> Department of Microbiology Immunology &amp; Cell Biology West Virginia University Morgantown WV 26506 USA","institution_ids":["https://openalex.org/I12097938"]},{"raw_affiliation_string":"1. Department of Microbiology, Immunology & Cell Biology, West Virginia University, Morgantown, WV 26506, USA","institution_ids":["https://openalex.org/I12097938"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":1990,"currency":"USD","value_usd":1990},"apc_paid":{"value":1990,"currency":"USD","value_usd":1990},"fwci":5.7897,"has_fulltext":true,"cited_by_count":62,"citation_normalized_percentile":{"value":0.97433501,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"11","issue":"2","first_page":"105","last_page":"108"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9843999743461609,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9843999743461609,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.9438999891281128,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/chatbot","display_name":"Chatbot","score":0.7990682125091553},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6827359199523926},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.4169311225414276},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.40283894538879395},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3342222273349762},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.3287853002548218},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.06808480620384216}],"concepts":[{"id":"https://openalex.org/C2779041454","wikidata":"https://www.wikidata.org/wiki/Q870780","display_name":"Chatbot","level":2,"score":0.7990682125091553},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6827359199523926},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.4169311225414276},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.40283894538879395},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3342222273349762},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.3287853002548218},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.06808480620384216}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.15302/j-qb-023-0327","is_oa":true,"landing_page_url":"https://doi.org/10.15302/j-qb-023-0327","pdf_url":"https://journal.hep.com.cn/qb/EN/PDF/10.15302/J-QB-023-0327","source":{"id":"https://openalex.org/S4210172333","display_name":"Quantitative Biology","issn_l":"2095-4689","issn":["2095-4689","2095-4697"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Quantitative Biology","raw_type":"journal-article"},{"id":"pmid:37378043","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37378043","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Quantitative biology (Beijing, China)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10299548","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10299548","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10299548/pdf/nihms-1890079.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Quant Biol","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:8eb54cbbf5494f37bae1e3e11d8d39be","is_oa":true,"landing_page_url":"https://doaj.org/article/8eb54cbbf5494f37bae1e3e11d8d39be","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Quantitative Biology, Vol 11, Iss 2, Pp 105-108 (2023)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.15302/j-qb-023-0327","is_oa":true,"landing_page_url":"https://doi.org/10.15302/j-qb-023-0327","pdf_url":"https://journal.hep.com.cn/qb/EN/PDF/10.15302/J-QB-023-0327","source":{"id":"https://openalex.org/S4210172333","display_name":"Quantitative Biology","issn_l":"2095-4689","issn":["2095-4689","2095-4697"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Quantitative Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Quality Education","score":0.8500000238418579,"id":"https://metadata.un.org/sdg/4"}],"awards":[{"id":"https://openalex.org/G2045682171","display_name":null,"funder_award_id":"1P20 GM121322","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G223725784","display_name":null,"funder_award_id":"P20 GM103434","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G2271109026","display_name":null,"funder_award_id":"R01 LM013438","funder_id":"https://openalex.org/F4320337372","funder_display_name":"U.S. National Library of Medicine"},{"id":"https://openalex.org/G2956415725","display_name":null,"funder_award_id":"R01LM013438","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G4077189288","display_name":null,"funder_award_id":"U54 GM-104942","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G4080326608","display_name":null,"funder_award_id":"P20 GM121322","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G445001558","display_name":null,"funder_award_id":"P20 GM103434","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G5369719535","display_name":null,"funder_award_id":"GM103434","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G7101185317","display_name":null,"funder_award_id":"U54 GM-104942","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G7329403675","display_name":null,"funder_award_id":"U54 GM104942","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G8377306051","display_name":null,"funder_award_id":"GM103434","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"}],"funders":[{"id":"https://openalex.org/F4320309568","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06"},{"id":"https://openalex.org/F4320311274","display_name":"West Virginia University","ror":"https://ror.org/011vxgd24"},{"id":"https://openalex.org/F4320324787","display_name":"Peking University","ror":"https://ror.org/02v51f717"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"},{"id":"https://openalex.org/F4320337372","display_name":"U.S. National Library of Medicine","ror":"https://ror.org/0060t0j89"}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4360591931.pdf"},"referenced_works_count":5,"referenced_works":["https://openalex.org/W1552002488","https://openalex.org/W2117131162","https://openalex.org/W2259938310","https://openalex.org/W4313678819","https://openalex.org/W4315874291"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W4383501580","https://openalex.org/W4214931137","https://openalex.org/W4313813117","https://openalex.org/W4382052417","https://openalex.org/W3192088754","https://openalex.org/W4387007686","https://openalex.org/W3084631705","https://openalex.org/W3176146353","https://openalex.org/W4293646425"],"abstract_inverted_index":{"The":[0],"impressive":[1],"conversational":[2],"and":[3,65],"programming":[4],"abilities":[5],"of":[6,17,50,70],"ChatGPT":[7],"make":[8],"it":[9,55],"an":[10,28],"attractive":[11],"tool":[12],"for":[13,21,34,41],"facilitating":[14],"the":[15,48,51,68,71],"education":[16],"bioinformatics":[18,42,58,75],"data":[19,43],"analysis":[20,44],"beginners.":[22],"In":[23],"this":[24],"study,":[25],"we":[26,61],"proposed":[27],"iterative":[29],"model":[30,52,72],"to":[31,56],"fine-tune":[32],"instructions":[33],"guiding":[35],"a":[36],"chatbot":[37],"in":[38,73],"generating":[39],"code":[40],"tasks.":[45],"We":[46],"demonstrated":[47],"feasibility":[49],"by":[53],"applying":[54],"various":[57],"topics.":[59],"Additionally,":[60],"discussed":[62],"practical":[63],"considerations":[64],"limitations":[66],"regarding":[67],"use":[69],"chatbot-aided":[74],"education.":[76]},"counts_by_year":[{"year":2026,"cited_by_count":5},{"year":2025,"cited_by_count":12},{"year":2024,"cited_by_count":25},{"year":2023,"cited_by_count":20}],"updated_date":"2026-07-26T07:53:14.480251","created_date":"2025-10-10T00:00:00"}
