{"id":"https://openalex.org/W4360597837","doi":"https://doi.org/10.15302/j-qb-022-0295","title":"Comparative analysis of NovaSeq 6000 and MGISEQ 2000 single\u2010cell RNA sequencing data","display_name":"Comparative analysis of NovaSeq 6000 and MGISEQ 2000 single\u2010cell RNA sequencing data","publication_year":2022,"publication_date":"2022-12-01","ids":{"openalex":"https://openalex.org/W4360597837","doi":"https://doi.org/10.15302/j-qb-022-0295"},"language":"en","primary_location":{"id":"doi:10.15302/j-qb-022-0295","is_oa":true,"landing_page_url":"https://doi.org/10.15302/j-qb-022-0295","pdf_url":"https://journal.hep.com.cn/qb/EN/PDF/10.15302/J-QB-022-0295","source":{"id":"https://openalex.org/S4210172333","display_name":"Quantitative Biology","issn_l":"2095-4689","issn":["2095-4689","2095-4697"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Quantitative Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://journal.hep.com.cn/qb/EN/PDF/10.15302/J-QB-022-0295","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5025588425","display_name":"Weiran Chen","orcid":"https://orcid.org/0000-0002-3084-1500"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210096013","display_name":"Shanghai Institute of Nutrition and Health","ror":"https://ror.org/00rytkh49","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210096013"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Weiran Chen","raw_affiliation_strings":["<!--1--> Bio\u2010Med Big Data Center Key Laboratory of Computational Biology Shanghai Institute of Nutrition and Health Chinese Academy of Sciences Shanghai 200031 China","1. Bio-Med Big Data Center, Key Laboratory of Computational Biology, Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences, Shanghai 200031, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"<!--1--> Bio\u2010Med Big Data Center Key Laboratory of Computational Biology Shanghai Institute of Nutrition and Health Chinese Academy of Sciences Shanghai 200031 China","institution_ids":["https://openalex.org/I4210096013"]},{"raw_affiliation_string":"1. Bio-Med Big Data Center, Key Laboratory of Computational Biology, Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences, Shanghai 200031, China","institution_ids":["https://openalex.org/I4210096013","https://openalex.org/I19820366"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101493985","display_name":"Md Wahiduzzaman","orcid":"https://orcid.org/0000-0001-8288-2884"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210096013","display_name":"Shanghai Institute of Nutrition and Health","ror":"https://ror.org/00rytkh49","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210096013"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Md Wahiduzzaman","raw_affiliation_strings":["<!--1--> Bio\u2010Med Big Data Center Key Laboratory of Computational Biology Shanghai Institute of Nutrition and Health Chinese Academy of Sciences Shanghai 200031 China","1. Bio-Med Big Data Center, Key Laboratory of Computational Biology, Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences, Shanghai 200031, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"<!--1--> Bio\u2010Med Big Data Center Key Laboratory of Computational Biology Shanghai Institute of Nutrition and Health Chinese Academy of Sciences Shanghai 200031 China","institution_ids":["https://openalex.org/I4210096013"]},{"raw_affiliation_string":"1. Bio-Med Big Data Center, Key Laboratory of Computational Biology, Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences, Shanghai 200031, China","institution_ids":["https://openalex.org/I4210096013","https://openalex.org/I19820366"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100447154","display_name":"Quan Li","orcid":"https://orcid.org/0000-0002-9042-360X"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210096013","display_name":"Shanghai Institute of Nutrition and Health","ror":"https://ror.org/00rytkh49","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210096013"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Quan Li","raw_affiliation_strings":["<!--1--> Bio\u2010Med Big Data Center Key Laboratory of Computational Biology Shanghai Institute of Nutrition and Health Chinese Academy of Sciences Shanghai 200031 China","1. Bio-Med Big Data Center, Key Laboratory of Computational Biology, Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences, Shanghai 200031, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"<!--1--> Bio\u2010Med Big Data Center Key Laboratory of Computational Biology Shanghai Institute of Nutrition and Health Chinese Academy of Sciences Shanghai 200031 China","institution_ids":["https://openalex.org/I4210096013"]},{"raw_affiliation_string":"1. Bio-Med Big Data Center, Key Laboratory of Computational Biology, Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences, Shanghai 200031, China","institution_ids":["https://openalex.org/I4210096013","https://openalex.org/I19820366"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008280608","display_name":"Yixue Li","orcid":"https://orcid.org/0000-0002-1198-7176"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210096013","display_name":"Shanghai Institute of Nutrition and Health","ror":"https://ror.org/00rytkh49","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210096013"]},{"id":"https://openalex.org/I4210137766","display_name":"Institute for Advanced Study","ror":"https://ror.org/03xg85719","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210137766"]},{"id":"https://openalex.org/I4210165038","display_name":"University of Chinese Academy of Sciences","ror":"https://ror.org/05qbk4x57","country_code":"CN","type":"education","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210165038"]}],"countries":["CN","DE"],"is_corresponding":false,"raw_author_name":"Yixue Li","raw_affiliation_strings":["<!--1--> Bio\u2010Med Big Data Center Key Laboratory of Computational Biology Shanghai Institute of Nutrition and Health Chinese Academy of Sciences Shanghai 200031 China","<!--2--> School of Life Science Hangzhou Institute for Advanced Study University of Chinese Academy of Sciences Hangzhou China","1. Bio-Med Big Data Center, Key Laboratory of Computational Biology, Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences, Shanghai 200031, China","2. School of Life Science, Hangzhou Institute for Advanced Study, University of Chinese Academy of Sciences, Hangzhou, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"<!--1--> Bio\u2010Med Big Data Center Key Laboratory of Computational Biology Shanghai Institute of Nutrition and Health Chinese Academy of Sciences Shanghai 200031 China","institution_ids":["https://openalex.org/I4210096013"]},{"raw_affiliation_string":"<!--2--> School of Life Science Hangzhou Institute for Advanced Study University of Chinese Academy of Sciences Hangzhou China","institution_ids":["https://openalex.org/I4210137766"]},{"raw_affiliation_string":"1. Bio-Med Big Data Center, Key Laboratory of Computational Biology, Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences, Shanghai 200031, China","institution_ids":["https://openalex.org/I4210096013","https://openalex.org/I19820366"]},{"raw_affiliation_string":"2. School of Life Science, Hangzhou Institute for Advanced Study, University of Chinese Academy of Sciences, Hangzhou, China","institution_ids":["https://openalex.org/I4210165038"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5106364311","display_name":"Guangyong Zheng","orcid":null},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210096013","display_name":"Shanghai Institute of Nutrition and Health","ror":"https://ror.org/00rytkh49","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210096013"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Guangyong Zheng","raw_affiliation_strings":["<!--1--> Bio\u2010Med Big Data Center Key Laboratory of Computational Biology Shanghai Institute of Nutrition and Health Chinese Academy of Sciences Shanghai 200031 China","1. Bio-Med Big Data Center, Key Laboratory of Computational Biology, Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences, Shanghai 200031, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"<!--1--> Bio\u2010Med Big Data Center Key Laboratory of Computational Biology Shanghai Institute of Nutrition and Health Chinese Academy of Sciences Shanghai 200031 China","institution_ids":["https://openalex.org/I4210096013"]},{"raw_affiliation_string":"1. Bio-Med Big Data Center, Key Laboratory of Computational Biology, Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences, Shanghai 200031, China","institution_ids":["https://openalex.org/I4210096013","https://openalex.org/I19820366"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5025077602","display_name":"Tao Huang","orcid":"https://orcid.org/0000-0003-1975-9693"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210096013","display_name":"Shanghai Institute of Nutrition and Health","ror":"https://ror.org/00rytkh49","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210096013"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tao Huang","raw_affiliation_strings":["<!--1--> Bio\u2010Med Big Data Center Key Laboratory of Computational Biology Shanghai Institute of Nutrition and Health Chinese Academy of Sciences Shanghai 200031 China","1. Bio-Med Big Data Center, Key Laboratory of Computational Biology, Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences, Shanghai 200031, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"<!--1--> Bio\u2010Med Big Data Center Key Laboratory of Computational Biology Shanghai Institute of Nutrition and Health Chinese Academy of Sciences Shanghai 200031 China","institution_ids":["https://openalex.org/I4210096013"]},{"raw_affiliation_string":"1. Bio-Med Big Data Center, Key Laboratory of Computational Biology, Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences, Shanghai 200031, China","institution_ids":["https://openalex.org/I4210096013","https://openalex.org/I19820366"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5025588425"],"corresponding_institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210096013"],"apc_list":null,"apc_paid":null,"fwci":0.1732,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.49814074,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"10","issue":"4","first_page":"333","last_page":"340"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9839000105857849,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10773","display_name":"Extracellular vesicles in disease","score":0.9825000166893005,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.8430429100990295},{"id":"https://openalex.org/keywords/pipeline-transport","display_name":"Pipeline transport","score":0.693518340587616},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6226415038108826},{"id":"https://openalex.org/keywords/benchmarking","display_name":"Benchmarking","score":0.5623027682304382},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.44369152188301086},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.36910051107406616},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.18788006901741028},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.1652790904045105},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.06123623251914978}],"concepts":[{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.8430429100990295},{"id":"https://openalex.org/C175309249","wikidata":"https://www.wikidata.org/wiki/Q725864","display_name":"Pipeline transport","level":2,"score":0.693518340587616},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6226415038108826},{"id":"https://openalex.org/C86251818","wikidata":"https://www.wikidata.org/wiki/Q816754","display_name":"Benchmarking","level":2,"score":0.5623027682304382},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.44369152188301086},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.36910051107406616},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.18788006901741028},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.1652790904045105},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.06123623251914978},{"id":"https://openalex.org/C87717796","wikidata":"https://www.wikidata.org/wiki/Q146326","display_name":"Environmental engineering","level":1,"score":0.0},{"id":"https://openalex.org/C144133560","wikidata":"https://www.wikidata.org/wiki/Q4830453","display_name":"Business","level":0,"score":0.0},{"id":"https://openalex.org/C162853370","wikidata":"https://www.wikidata.org/wiki/Q39809","display_name":"Marketing","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.15302/j-qb-022-0295","is_oa":true,"landing_page_url":"https://doi.org/10.15302/j-qb-022-0295","pdf_url":"https://journal.hep.com.cn/qb/EN/PDF/10.15302/J-QB-022-0295","source":{"id":"https://openalex.org/S4210172333","display_name":"Quantitative Biology","issn_l":"2095-4689","issn":["2095-4689","2095-4697"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Quantitative Biology","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:397c7a2cb39e4556b9caaa356a6f813b","is_oa":true,"landing_page_url":"https://doaj.org/article/397c7a2cb39e4556b9caaa356a6f813b","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Quantitative Biology, Vol 10, Iss 4, Pp 333-340 (2022)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.15302/j-qb-022-0295","is_oa":true,"landing_page_url":"https://doi.org/10.15302/j-qb-022-0295","pdf_url":"https://journal.hep.com.cn/qb/EN/PDF/10.15302/J-QB-022-0295","source":{"id":"https://openalex.org/S4210172333","display_name":"Quantitative Biology","issn_l":"2095-4689","issn":["2095-4689","2095-4697"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Quantitative Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2349219937","display_name":null,"funder_award_id":"XDB38050200","funder_id":"https://openalex.org/F4320321133","funder_display_name":"Chinese Academy of Sciences"},{"id":"https://openalex.org/G3012199462","display_name":null,"funder_award_id":"XDA26040304","funder_id":"https://openalex.org/F4320321133","funder_display_name":"Chinese Academy of Sciences"}],"funders":[{"id":"https://openalex.org/F4320321133","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4360597837.pdf"},"referenced_works_count":19,"referenced_works":["https://openalex.org/W1973950074","https://openalex.org/W2102212449","https://openalex.org/W2178888844","https://openalex.org/W2396849069","https://openalex.org/W2809616137","https://openalex.org/W2885307522","https://openalex.org/W2886347923","https://openalex.org/W2926010705","https://openalex.org/W2936052783","https://openalex.org/W2949177718","https://openalex.org/W2951506174","https://openalex.org/W2951890476","https://openalex.org/W2952109315","https://openalex.org/W2953170162","https://openalex.org/W2979265372","https://openalex.org/W3004512212","https://openalex.org/W3024314143","https://openalex.org/W3041512494","https://openalex.org/W3159611277"],"related_works":["https://openalex.org/W4380433113","https://openalex.org/W4386072068","https://openalex.org/W252339960","https://openalex.org/W2390529043","https://openalex.org/W2378320433","https://openalex.org/W2358343511","https://openalex.org/W2051877971","https://openalex.org/W1970117064","https://openalex.org/W1787170397","https://openalex.org/W4292347844"],"abstract_inverted_index":{"Background":[0],"Single\u2010cell":[1],"RNA":[2],"sequencing":[3,32,46,50,72,90,191],"(scRNA\u2010seq)":[4],"technology":[5],"is":[6,78],"now":[7],"becoming":[8],"a":[9,58,80,196],"widely":[10],"applied":[11],"method":[12],"of":[13,82,84,94,140,170,184],"transcriptome":[14],"exploration":[15],"that":[16,106,148],"helps":[17],"to":[18,39,61,198],"reveal":[19],"cell\u2010type":[20],"composition":[21],"as":[22,24,57,193,195],"well":[23,194],"cell\u2010state":[25],"heterogeneity":[26],"for":[27,43,189],"specific":[28,89],"biological":[29],"processes.":[30],"Distinct":[31],"platforms":[33,51,73,91,192],"and":[34,52,97,115,126,172],"processing":[35,53,187],"pipelines":[36,54,86,151],"may":[37],"contribute":[38],"various":[40],"results":[41],"even":[42],"the":[44,123,137,141,155,160,182],"same":[45],"samples.":[47],"Therefore,":[48],"benchmarking":[49],"was":[55,107,120],"considered":[56],"necessary":[59],"step":[60],"interpret":[62],"scRNA\u2010seq":[63,104,185],"data.":[64],"However,":[65],"recent":[66],"comparing":[67],"efforts":[68],"were":[69],"constrained":[70],"in":[71,92,163,168],"or":[74],"analyzing":[75,85],"pipelines.":[76],"There":[77],"still":[79],"lack":[81],"knowledge":[83],"matched":[87],"with":[88],"aspects":[93],"sensitivity,":[95],"precision,":[96],"so":[98],"on.":[99],"Methods":[100],"We":[101,131,146],"downloaded":[102],"public":[103],"data":[105,119,186],"generated":[108],"by":[109],"two":[110,190],"distinct":[111],"sequencers,":[112],"NovaSeq":[113],"6000":[114],"MGISEQ":[116],"2000.":[117],"Then":[118],"processed":[121],"through":[122],"Drop\u2010seq\u2010tools,":[124],"UMI\u2010tools":[125,166],"Cell":[127,156],"Ranger":[128,157],"pipeline":[129,158],"respectively.":[130],"calculated":[132],"multiple":[133],"measurements":[134],"based":[135],"on":[136],"expression":[138],"profiles":[139],"six":[142],"platform\u2010pipeline":[143,200],"combinations.":[144,201],"Results":[145],"found":[147],"all":[149],"three":[150],"had":[152],"comparable":[153],"performance,":[154],"achieved":[159],"best":[161],"performance":[162],"precision":[164],"while":[165],"prevailed":[167],"terms":[169],"sensitivity":[171],"marker":[173],"calling.":[174],"Conclusions":[175],"Our":[176],"work":[177],"provided":[178],"an":[179],"insight":[180],"into":[181],"selection":[183],"tools":[188],"framework":[197],"evaluate":[199]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
