{"id":"https://openalex.org/W4399041853","doi":"https://doi.org/10.1515/jib-2024-0003","title":"SBMLToolkit.jl: a Julia package for importing SBML into the SciML ecosystem","display_name":"SBMLToolkit.jl: a Julia package for importing SBML into the SciML ecosystem","publication_year":2024,"publication_date":"2024-03-01","ids":{"openalex":"https://openalex.org/W4399041853","doi":"https://doi.org/10.1515/jib-2024-0003","pmid":"https://pubmed.ncbi.nlm.nih.gov/38801698"},"language":"en","primary_location":{"id":"doi:10.1515/jib-2024-0003","is_oa":true,"landing_page_url":"http://dx.doi.org/10.1515/jib-2024-0003","pdf_url":"https://www.degruyter.com/document/doi/10.1515/jib-2024-0003/pdf","source":{"id":"https://openalex.org/S4393917359","display_name":"Berichte aus der medizinischen Informatik und Bioinformatik/Journal of integrative bioinformatics","issn_l":"1432-4385","issn":["1432-4385","1613-4516"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Integrative Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://www.degruyter.com/document/doi/10.1515/jib-2024-0003/pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5055186794","display_name":"Paul Lang","orcid":"https://orcid.org/0000-0002-6388-2405"},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Paul F. Lang","raw_affiliation_strings":["Deep Origin , South San Francisco , USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Deep Origin , South San Francisco , USA","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071693995","display_name":"Anand Jain","orcid":"https://orcid.org/0000-0002-2935-5441"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Anand Jain","raw_affiliation_strings":["JuliaHub , Boston , USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"JuliaHub , Boston , USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5043195923","display_name":"Christopher Rackauckas","orcid":"https://orcid.org/0000-0001-5850-0663"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]},{"id":"https://openalex.org/I63966007","display_name":"Massachusetts Institute of Technology","ror":"https://ror.org/042nb2s44","country_code":"US","type":"education","lineage":["https://openalex.org/I63966007"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Christopher Rackauckas","raw_affiliation_strings":["Computer Science and Artificial Intelligence Laboratory (CSAIL) , Massachusetts Institute of Technology , Boston , USA","JuliaHub , Boston , USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Science and Artificial Intelligence Laboratory (CSAIL) , Massachusetts Institute of Technology , Boston , USA","institution_ids":["https://openalex.org/I63966007"]},{"raw_affiliation_string":"JuliaHub , Boston , USA","institution_ids":["https://openalex.org/I111088046"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5055186794"],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.2185,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.54413138,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"21","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11764","display_name":"Evolution and Genetic Dynamics","score":0.984000027179718,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11975","display_name":"Evolutionary Algorithms and Applications","score":0.9751999974250793,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/sbml","display_name":"SBML","score":0.9436875581741333},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8076819181442261},{"id":"https://openalex.org/keywords/code","display_name":"Code (set theory)","score":0.4772734045982361},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.4673885107040405},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.4507739543914795},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.4310173988342285},{"id":"https://openalex.org/keywords/preprocessor","display_name":"Preprocessor","score":0.42164555191993713},{"id":"https://openalex.org/keywords/symbolic-computation","display_name":"Symbolic computation","score":0.41154617071151733},{"id":"https://openalex.org/keywords/computational-science","display_name":"Computational science","score":0.39409711956977844},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3568011522293091},{"id":"https://openalex.org/keywords/markup-language","display_name":"Markup language","score":0.12591442465782166},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.09505060315132141}],"concepts":[{"id":"https://openalex.org/C87186988","wikidata":"https://www.wikidata.org/wiki/Q452197","display_name":"SBML","level":4,"score":0.9436875581741333},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8076819181442261},{"id":"https://openalex.org/C2776760102","wikidata":"https://www.wikidata.org/wiki/Q5139990","display_name":"Code (set theory)","level":3,"score":0.4772734045982361},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.4673885107040405},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.4507739543914795},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.4310173988342285},{"id":"https://openalex.org/C34736171","wikidata":"https://www.wikidata.org/wiki/Q918333","display_name":"Preprocessor","level":2,"score":0.42164555191993713},{"id":"https://openalex.org/C110812573","wikidata":"https://www.wikidata.org/wiki/Q175515","display_name":"Symbolic computation","level":2,"score":0.41154617071151733},{"id":"https://openalex.org/C459310","wikidata":"https://www.wikidata.org/wiki/Q117801","display_name":"Computational science","level":1,"score":0.39409711956977844},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3568011522293091},{"id":"https://openalex.org/C45874996","wikidata":"https://www.wikidata.org/wiki/Q37045","display_name":"Markup language","level":3,"score":0.12591442465782166},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.09505060315132141},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.0},{"id":"https://openalex.org/C8797682","wikidata":"https://www.wikidata.org/wiki/Q2115","display_name":"XML","level":2,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1515/jib-2024-0003","is_oa":true,"landing_page_url":"http://dx.doi.org/10.1515/jib-2024-0003","pdf_url":"https://www.degruyter.com/document/doi/10.1515/jib-2024-0003/pdf","source":{"id":"https://openalex.org/S4393917359","display_name":"Berichte aus der medizinischen Informatik und Bioinformatik/Journal of integrative bioinformatics","issn_l":"1432-4385","issn":["1432-4385","1613-4516"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Integrative Bioinformatics","raw_type":"journal-article"},{"id":"pmid:38801698","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38801698","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of integrative bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11294517","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11294517","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11294517/pdf/jib-21-1-jib-2024-0003.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Integr Bioinform","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:6ae0cf3ace624c3f97687bbf28d30f80","is_oa":true,"landing_page_url":"https://doaj.org/article/6ae0cf3ace624c3f97687bbf28d30f80","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Integrative Bioinformatics, Vol 21, Iss 1, Pp 524-31 (2024)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1515/jib-2024-0003","is_oa":true,"landing_page_url":"http://dx.doi.org/10.1515/jib-2024-0003","pdf_url":"https://www.degruyter.com/document/doi/10.1515/jib-2024-0003/pdf","source":{"id":"https://openalex.org/S4393917359","display_name":"Berichte aus der medizinischen Informatik und Bioinformatik/Journal of integrative bioinformatics","issn_l":"1432-4385","issn":["1432-4385","1613-4516"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Integrative Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Life in Land","id":"https://metadata.un.org/sdg/15","score":0.5600000023841858}],"awards":[{"id":"https://openalex.org/G5882818619","display_name":null,"funder_award_id":"EP/L016494/1","funder_id":"https://openalex.org/F4320320290","funder_display_name":"University of Oxford"},{"id":"https://openalex.org/G7100525546","display_name":null,"funder_award_id":"EP/L016494/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G910189030","display_name":"EPSRC and BBSRC Centre for Doctoral Training in Synthetic Biology","funder_award_id":"EP/L016494/1","funder_id":"https://openalex.org/F4320334627","funder_display_name":"Engineering and Physical Sciences Research Council"}],"funders":[{"id":"https://openalex.org/F4320320290","display_name":"University of Oxford","ror":"https://ror.org/052gg0110"},{"id":"https://openalex.org/F4320334627","display_name":"Engineering and Physical Sciences Research Council","ror":"https://ror.org/0439y7842"},{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4399041853.pdf"},"referenced_works_count":22,"referenced_works":["https://openalex.org/W2102653059","https://openalex.org/W2115343689","https://openalex.org/W2120575449","https://openalex.org/W2125615370","https://openalex.org/W2134221731","https://openalex.org/W2137128504","https://openalex.org/W2150908245","https://openalex.org/W2170122529","https://openalex.org/W2239232218","https://openalex.org/W2619381903","https://openalex.org/W2765869690","https://openalex.org/W2807821194","https://openalex.org/W2884300959","https://openalex.org/W2916475656","https://openalex.org/W2963232822","https://openalex.org/W2988361147","https://openalex.org/W2999026783","https://openalex.org/W3211341174","https://openalex.org/W4362673400","https://openalex.org/W4386909827","https://openalex.org/W4387736994","https://openalex.org/W4388741168"],"related_works":["https://openalex.org/W1568154633","https://openalex.org/W1833372769","https://openalex.org/W1994518768","https://openalex.org/W2082621456","https://openalex.org/W104010570","https://openalex.org/W2150908245","https://openalex.org/W2069162648","https://openalex.org/W2565701637","https://openalex.org/W1987628135","https://openalex.org/W4226134703"],"abstract_inverted_index":{"Julia":[0,28,125,135,145],"is":[1,149,159],"a":[2],"general":[3],"purpose":[4],"programming":[5],"language":[6],"that":[7],"was":[8],"designed":[9],"for":[10,32,69],"simplifying":[11],"and":[12,16,50,53,67,77,109,140],"accelerating":[13],"numerical":[14],"analysis":[15],"computational":[17,116],"science.":[18],"In":[19],"particular":[20],"the":[21,85,102,123,131,141,144,153],"Scientific":[22],"Machine":[23],"Learning":[24],"(SciML)":[25],"ecosystem":[26,104],"of":[27,44,55,61,80,111,133,143],"packages":[29],"includes":[30],"frameworks":[31],"high-performance":[33],"symbolic-numeric":[34],"computations.":[35,56],"It":[36],"allows":[37],"users":[38],"to":[39,91,105,122,129],"automatically":[40],"enhance":[41],"high-level":[42],"descriptions":[43],"their":[45],"models":[46,100],"with":[47,73,119],"symbolic":[48],"preprocessing":[49],"automatic":[51],"sparsification":[52],"parallelization":[54],"This":[57],"enables":[58],"performant":[59],"solution":[60],"differential":[62,75],"equations,":[63],"efficient":[64],"parameter":[65],"estimation":[66],"methodologies":[68],"automated":[70],"model":[71,107],"discovery":[72],"neural":[74],"equations":[76],"sparse":[78],"identification":[79],"nonlinear":[81],"dynamics.":[82],"To":[83],"give":[84],"systems":[86,117],"biology":[87],"community":[88],"easy":[89,120],"access":[90,121],"SciML,":[92],"we":[93,127],"developed":[94],"SBMLToolkit.jl.":[95],"SBMLToolkit.jl":[96,148],"imports":[97],"dynamic":[98],"SBML":[99],"into":[101],"SciML":[103],"accelerate":[106],"simulation":[108],"fitting":[110],"kinetic":[112],"parameters.":[113],"By":[114],"providing":[115],"biologists":[118],"open-source":[124],"ecosystevnm,":[126],"hope":[128],"catalyze":[130],"development":[132],"further":[134],"tools":[136],"in":[137],"this":[138],"domain":[139],"growth":[142],"bioscience":[146],"community.":[147],"freely":[150],"available":[151,160],"under":[152],"MIT":[154],"license.":[155],"The":[156],"source":[157],"code":[158],"at":[161],"https://github.com/SciML/SBMLToolkit.jl.":[162]},"counts_by_year":[{"year":2024,"cited_by_count":1}],"updated_date":"2026-05-06T08:25:59.206177","created_date":"2025-10-10T00:00:00"}