{"id":"https://openalex.org/W4410996434","doi":"https://doi.org/10.1515/jib-2024-0048","title":"A ViTUNeT-based model using YOLOv8 for efficient LVNC diagnosis and automatic cleaning of dataset","display_name":"A ViTUNeT-based model using YOLOv8 for efficient LVNC diagnosis and automatic cleaning of dataset","publication_year":2025,"publication_date":"2025-06-01","ids":{"openalex":"https://openalex.org/W4410996434","doi":"https://doi.org/10.1515/jib-2024-0048","pmid":"https://pubmed.ncbi.nlm.nih.gov/40460443"},"language":"en","primary_location":{"id":"doi:10.1515/jib-2024-0048","is_oa":true,"landing_page_url":"https://doi.org/10.1515/jib-2024-0048","pdf_url":"https://www.degruyterbrill.com/document/doi/10.1515/jib-2024-0048/pdf","source":{"id":"https://openalex.org/S4393917359","display_name":"Berichte aus der medizinischen Informatik und Bioinformatik/Journal of integrative bioinformatics","issn_l":"1432-4385","issn":["1432-4385","1613-4516"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Integrative Bioinformatics","raw_type":"journal-article"},"type":"review","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://www.degruyterbrill.com/document/doi/10.1515/jib-2024-0048/pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"Salvador de Haro","orcid":null},"institutions":[{"id":"https://openalex.org/I80180929","display_name":"Universidad de Murcia","ror":"https://ror.org/03p3aeb86","country_code":"ES","type":"education","lineage":["https://openalex.org/I80180929"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Salvador de Haro","raw_affiliation_strings":["Computer Engineering Department , 16751 University of Murcia , 30100 Murcia , Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Engineering Department , 16751 University of Murcia , 30100 Murcia , Spain","institution_ids":["https://openalex.org/I80180929"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057772505","display_name":"Gregorio Bernab\u00e9","orcid":"https://orcid.org/0000-0002-7265-3508"},"institutions":[{"id":"https://openalex.org/I80180929","display_name":"Universidad de Murcia","ror":"https://ror.org/03p3aeb86","country_code":"ES","type":"education","lineage":["https://openalex.org/I80180929"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Gregorio Bernab\u00e9","raw_affiliation_strings":["Computer Engineering Department , 16751 University of Murcia , 30100 Murcia , Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Engineering Department , 16751 University of Murcia , 30100 Murcia , Spain","institution_ids":["https://openalex.org/I80180929"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070286319","display_name":"Jos\u00e9 M. Garc\u0131\u0301a","orcid":"https://orcid.org/0000-0002-6388-2835"},"institutions":[{"id":"https://openalex.org/I80180929","display_name":"Universidad de Murcia","ror":"https://ror.org/03p3aeb86","country_code":"ES","type":"education","lineage":["https://openalex.org/I80180929"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Jos\u00e9 Manuel Garc\u00eda","raw_affiliation_strings":["Computer Engineering Department , 16751 University of Murcia , 30100 Murcia , Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Engineering Department , 16751 University of Murcia , 30100 Murcia , Spain","institution_ids":["https://openalex.org/I80180929"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5066266424","display_name":"Pilar Gonz\u00e1lez\u2010F\u00e9rez","orcid":"https://orcid.org/0000-0003-1681-5442"},"institutions":[{"id":"https://openalex.org/I80180929","display_name":"Universidad de Murcia","ror":"https://ror.org/03p3aeb86","country_code":"ES","type":"education","lineage":["https://openalex.org/I80180929"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Pilar Gonz\u00e1lez-F\u00e9rez","raw_affiliation_strings":["Computer Engineering Department , 16751 University of Murcia , 30100 Murcia , Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Engineering Department , 16751 University of Murcia , 30100 Murcia , Spain","institution_ids":["https://openalex.org/I80180929"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I80180929"],"apc_list":null,"apc_paid":null,"fwci":1.2111,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.79928692,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":96,"max":98},"biblio":{"volume":"22","issue":"2","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10882","display_name":"Cardiomyopathy and Myosin Studies","score":0.9962999820709229,"subfield":{"id":"https://openalex.org/subfields/2705","display_name":"Cardiology and Cardiovascular Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10882","display_name":"Cardiomyopathy and Myosin Studies","score":0.9962999820709229,"subfield":{"id":"https://openalex.org/subfields/2705","display_name":"Cardiology and Cardiovascular Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10409","display_name":"Fuel Cells and Related Materials","score":0.9944999814033508,"subfield":{"id":"https://openalex.org/subfields/2208","display_name":"Electrical and Electronic Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11663","display_name":"Viral Infectious Diseases and Gene Expression in Insects","score":0.9854999780654907,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6034971475601196},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.41324010491371155}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6034971475601196},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.41324010491371155}],"mesh":[{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006352","descriptor_name":"Heart Ventricles","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D006352","descriptor_name":"Heart Ventricles","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D006352","descriptor_name":"Heart Ventricles","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D008279","descriptor_name":"Magnetic Resonance Imaging","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008279","descriptor_name":"Magnetic Resonance Imaging","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008279","descriptor_name":"Magnetic Resonance Imaging","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009202","descriptor_name":"Cardiomyopathies","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D009202","descriptor_name":"Cardiomyopathies","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D009202","descriptor_name":"Cardiomyopathies","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1515/jib-2024-0048","is_oa":true,"landing_page_url":"https://doi.org/10.1515/jib-2024-0048","pdf_url":"https://www.degruyterbrill.com/document/doi/10.1515/jib-2024-0048/pdf","source":{"id":"https://openalex.org/S4393917359","display_name":"Berichte aus der medizinischen Informatik und Bioinformatik/Journal of integrative bioinformatics","issn_l":"1432-4385","issn":["1432-4385","1613-4516"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Integrative Bioinformatics","raw_type":"journal-article"},{"id":"pmid:40460443","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40460443","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of integrative bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:cce91c74e7c6436cb67b34e089b92c2a","is_oa":true,"landing_page_url":"https://doaj.org/article/cce91c74e7c6436cb67b34e089b92c2a","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Integrative Bioinformatics, Vol 22, Iss 2, Pp 1-11 (2025)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:11375569","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12569573","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1515/jib-2024-0048","is_oa":true,"landing_page_url":"https://doi.org/10.1515/jib-2024-0048","pdf_url":"https://www.degruyterbrill.com/document/doi/10.1515/jib-2024-0048/pdf","source":{"id":"https://openalex.org/S4393917359","display_name":"Berichte aus der medizinischen Informatik und Bioinformatik/Journal of integrative bioinformatics","issn_l":"1432-4385","issn":["1432-4385","1613-4516"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Integrative Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4410996434.pdf","grobid_xml":"https://content.openalex.org/works/W4410996434.grobid-xml"},"referenced_works_count":28,"referenced_works":["https://openalex.org/W154631126","https://openalex.org/W1901129140","https://openalex.org/W2113449039","https://openalex.org/W2132010217","https://openalex.org/W2139105408","https://openalex.org/W2154669783","https://openalex.org/W2155699643","https://openalex.org/W2342896945","https://openalex.org/W2555703235","https://openalex.org/W2600637423","https://openalex.org/W2765277470","https://openalex.org/W2795587607","https://openalex.org/W2904978253","https://openalex.org/W2911490596","https://openalex.org/W3014974815","https://openalex.org/W3112701542","https://openalex.org/W3127751679","https://openalex.org/W3216815287","https://openalex.org/W4210820029","https://openalex.org/W4288265053","https://openalex.org/W4362679702","https://openalex.org/W4387891123","https://openalex.org/W4389625080","https://openalex.org/W4390189930","https://openalex.org/W4390874575","https://openalex.org/W4391749344","https://openalex.org/W4409774001","https://openalex.org/W6739901393"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W4396696052"],"abstract_inverted_index":{"Left":[0],"ventricular":[1],"non-compaction":[2],"is":[3],"a":[4,39,43,85,104,149,172],"cardiac":[5,177],"condition":[6],"marked":[7],"by":[8],"excessive":[9],"trabeculae":[10,49],"in":[11,50],"the":[12,25,32,58,96,109,120],"left":[13,97],"ventricle's":[14],"inner":[15],"wall.":[16],"Although":[17],"various":[18],"methods":[19],"exist":[20],"to":[21,47,60,78,94,107,117,131,155,162],"measure":[22],"these":[23],"structures,":[24],"medical":[26],"community":[27],"still":[28],"lacks":[29],"consensus":[30],"on":[31,42,119],"best":[33],"approach.":[34],"Previously,":[35],"we":[36,56,102,143],"developed":[37],"DL-LVTQ,":[38,132],"tool":[40],"based":[41],"UNet":[44],"neural":[45,86],"network,":[46],"quantify":[48],"this":[51,54],"region.":[52],"In":[53],"study,":[55],"expand":[57],"dataset":[59,134],"include":[61],"new":[62],"patients":[63],"with":[64,70,114,167],"Titin":[65],"cardiomyopathy":[66],"and":[67,91,111,127,147,157,180],"healthy":[68],"individuals":[69],"fewer":[71],"trabeculae,":[72],"requiring":[73],"retraining":[74],"of":[75,122],"our":[76],"models":[77,154],"enhance":[79],"predictions.":[80],"We":[81],"also":[82],"propose":[83],"ViTUNeT,":[84],"network":[87],"architecture":[88],"combining":[89],"U-Net":[90],"Vision":[92],"Transformers":[93],"segment":[95],"ventricle":[98,110],"more":[99],"accurately.":[100],"Additionally,":[101],"train":[103],"YOLOv8":[105,128,153,166],"model":[106,116],"detect":[108],"integrate":[112],"it":[113],"ViTUNeT":[115],"focus":[118],"region":[121],"interest.":[123],"Results":[124],"from":[125],"ViTUNet":[126],"are":[129],"similar":[130],"suggesting":[133],"quality":[135],"limits":[136],"further":[137],"accuracy":[138],"improvements.":[139],"To":[140],"test":[141],"this,":[142],"analyze":[144],"MRI":[145],"images":[146],"develop":[148],"method":[150],"using":[151],"two":[152],"identify":[156],"remove":[158],"problematic":[159],"images,":[160],"leading":[161],"better":[163],"results.":[164],"Combining":[165],"deep":[168],"learning":[169],"networks":[170],"offers":[171],"promising":[173],"approach":[174],"for":[175],"improving":[176],"image":[178],"analysis":[179],"segmentation.":[181]},"counts_by_year":[{"year":2026,"cited_by_count":1}],"updated_date":"2026-05-06T08:25:59.206177","created_date":"2025-10-10T00:00:00"}
