{"id":"https://openalex.org/W4400524508","doi":"https://doi.org/10.1515/jib-2024-0023","title":"Layout of anatomical structures and blood vessels based on the foundational model of anatomy","display_name":"Layout of anatomical structures and blood vessels based on the foundational model of anatomy","publication_year":2024,"publication_date":"2024-07-11","ids":{"openalex":"https://openalex.org/W4400524508","doi":"https://doi.org/10.1515/jib-2024-0023","pmid":"https://pubmed.ncbi.nlm.nih.gov/38996084"},"language":"en","primary_location":{"id":"doi:10.1515/jib-2024-0023","is_oa":true,"landing_page_url":"https://doi.org/10.1515/jib-2024-0023","pdf_url":"https://www.degruyter.com/document/doi/10.1515/jib-2024-0023/pdf","source":{"id":"https://openalex.org/S4393917359","display_name":"Berichte aus der medizinischen Informatik und Bioinformatik/Journal of integrative bioinformatics","issn_l":"1432-4385","issn":["1432-4385","1613-4516"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Integrative Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://www.degruyter.com/document/doi/10.1515/jib-2024-0023/pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5092830225","display_name":"Niklas Gr\u00f6ne","orcid":"https://orcid.org/0009-0002-8600-6421"},"institutions":[{"id":"https://openalex.org/I189712700","display_name":"University of Konstanz","ror":"https://ror.org/0546hnb39","country_code":"DE","type":"education","lineage":["https://openalex.org/I189712700"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Niklas Gr\u00f6ne","raw_affiliation_strings":["Department of Computer and Information Science , 570542 University of Konstanz , Konstanz , Germany"],"affiliations":[{"raw_affiliation_string":"Department of Computer and Information Science , 570542 University of Konstanz , Konstanz , Germany","institution_ids":["https://openalex.org/I189712700"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103307736","display_name":"Benjamin Gr\u00fcneisen","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Benjamin Gr\u00fcneisen","raw_affiliation_strings":["Independent Scholar , Halle (Saale) , Germany"],"affiliations":[{"raw_affiliation_string":"Independent Scholar , Halle (Saale) , Germany","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023110492","display_name":"Karsten Klein","orcid":"https://orcid.org/0000-0002-8345-5806"},"institutions":[{"id":"https://openalex.org/I189712700","display_name":"University of Konstanz","ror":"https://ror.org/0546hnb39","country_code":"DE","type":"education","lineage":["https://openalex.org/I189712700"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Karsten Klein","raw_affiliation_strings":["Department of Computer and Information Science , 570542 University of Konstanz , Konstanz , Germany"],"affiliations":[{"raw_affiliation_string":"Department of Computer and Information Science , 570542 University of Konstanz , Konstanz , Germany","institution_ids":["https://openalex.org/I189712700"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054690280","display_name":"Bernard de Bono","orcid":"https://orcid.org/0000-0003-0638-5274"},"institutions":[{"id":"https://openalex.org/I154130895","display_name":"University of Auckland","ror":"https://ror.org/03b94tp07","country_code":"NZ","type":"education","lineage":["https://openalex.org/I154130895"]}],"countries":["NZ"],"is_corresponding":false,"raw_author_name":"Bernard de Bono","raw_affiliation_strings":["Auckland Bioengineering Institute, University of Auckland , Auckland , New Zealand","Whitby et\u00a0al, LLC , Indianapolis , IN , USA"],"affiliations":[{"raw_affiliation_string":"Auckland Bioengineering Institute, University of Auckland , Auckland , New Zealand","institution_ids":["https://openalex.org/I154130895"]},{"raw_affiliation_string":"Whitby et\u00a0al, LLC , Indianapolis , IN , USA","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035416919","display_name":"Tobias Czauderna","orcid":"https://orcid.org/0000-0002-1788-9593"},"institutions":[{"id":"https://openalex.org/I116397343","display_name":"Hochschule Mittweida","ror":"https://ror.org/024ga3r86","country_code":"DE","type":"education","lineage":["https://openalex.org/I116397343"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Tobias Czauderna","raw_affiliation_strings":["Faculty of Applied Computer Sciences & Biosciences , University of Applied Sciences Mittweida , Mittweida , Germany"],"affiliations":[{"raw_affiliation_string":"Faculty of Applied Computer Sciences & Biosciences , University of Applied Sciences Mittweida , Mittweida , Germany","institution_ids":["https://openalex.org/I116397343"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5003441276","display_name":"Falk Schreiber","orcid":"https://orcid.org/0000-0002-9307-3254"},"institutions":[{"id":"https://openalex.org/I56590836","display_name":"Monash University","ror":"https://ror.org/02bfwt286","country_code":"AU","type":"education","lineage":["https://openalex.org/I56590836"]},{"id":"https://openalex.org/I189712700","display_name":"University of Konstanz","ror":"https://ror.org/0546hnb39","country_code":"DE","type":"education","lineage":["https://openalex.org/I189712700"]}],"countries":["AU","DE"],"is_corresponding":false,"raw_author_name":"Falk Schreiber","raw_affiliation_strings":["Department of Computer and Information Science , 570542 University of Konstanz , Konstanz , Germany","Faculty of Information Technology , Monash University , Clayton , Australia"],"affiliations":[{"raw_affiliation_string":"Department of Computer and Information Science , 570542 University of Konstanz , Konstanz , Germany","institution_ids":["https://openalex.org/I189712700"]},{"raw_affiliation_string":"Faculty of Information Technology , Monash University , Clayton , Australia","institution_ids":["https://openalex.org/I56590836"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5092830225"],"corresponding_institution_ids":["https://openalex.org/I189712700"],"apc_list":null,"apc_paid":null,"fwci":0.5069,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.63441517,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":95},"biblio":{"volume":"21","issue":"3","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10799","display_name":"Data Visualization and Analytics","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10799","display_name":"Data Visualization and Analytics","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10824","display_name":"Image Retrieval and Classification Techniques","score":0.9925000071525574,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11439","display_name":"Video Analysis and Summarization","score":0.984000027179718,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6658174395561218},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.6383508443832397},{"id":"https://openalex.org/keywords/comprehension","display_name":"Comprehension","score":0.6163325309753418},{"id":"https://openalex.org/keywords/anatomy","display_name":"Anatomy","score":0.48744964599609375},{"id":"https://openalex.org/keywords/human-anatomy","display_name":"Human anatomy","score":0.46442070603370667},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.32070785760879517},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.19085624814033508},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.061964213848114014}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6658174395561218},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.6383508443832397},{"id":"https://openalex.org/C511192102","wikidata":"https://www.wikidata.org/wiki/Q5156948","display_name":"Comprehension","level":2,"score":0.6163325309753418},{"id":"https://openalex.org/C105702510","wikidata":"https://www.wikidata.org/wiki/Q514","display_name":"Anatomy","level":1,"score":0.48744964599609375},{"id":"https://openalex.org/C2985650651","wikidata":"https://www.wikidata.org/wiki/Q23852","display_name":"Human anatomy","level":2,"score":0.46442070603370667},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.32070785760879517},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.19085624814033508},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.061964213848114014},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000715","descriptor_name":"Anatomy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000715","descriptor_name":"Anatomy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000715","descriptor_name":"Anatomy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000715","descriptor_name":"Anatomy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001808","descriptor_name":"Blood Vessels","qualifier_ui":"Q000033","qualifier_name":"anatomy & histology","is_major_topic":true},{"descriptor_ui":"D001808","descriptor_name":"Blood Vessels","qualifier_ui":"Q000033","qualifier_name":"anatomy & histology","is_major_topic":true},{"descriptor_ui":"D001808","descriptor_name":"Blood Vessels","qualifier_ui":"Q000033","qualifier_name":"anatomy & histology","is_major_topic":true},{"descriptor_ui":"D001808","descriptor_name":"Blood Vessels","qualifier_ui":"Q000033","qualifier_name":"anatomy & histology","is_major_topic":true},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008953","descriptor_name":"Models, Anatomic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008953","descriptor_name":"Models, Anatomic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008953","descriptor_name":"Models, Anatomic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008953","descriptor_name":"Models, Anatomic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1515/jib-2024-0023","is_oa":true,"landing_page_url":"https://doi.org/10.1515/jib-2024-0023","pdf_url":"https://www.degruyter.com/document/doi/10.1515/jib-2024-0023/pdf","source":{"id":"https://openalex.org/S4393917359","display_name":"Berichte aus der medizinischen Informatik und Bioinformatik/Journal of integrative bioinformatics","issn_l":"1432-4385","issn":["1432-4385","1613-4516"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Integrative Bioinformatics","raw_type":"journal-article"},{"id":"pmid:38996084","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38996084","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of integrative bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11602228","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11602228","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11602228/pdf/jib-21-3-jib-2024-0023.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Integr Bioinform","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:109543f213c84dc6b6670f385a14776c","is_oa":true,"landing_page_url":"https://doaj.org/article/109543f213c84dc6b6670f385a14776c","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Integrative Bioinformatics, Vol 21, Iss 3, Pp 478-500 (2024)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1515/jib-2024-0023","is_oa":true,"landing_page_url":"https://doi.org/10.1515/jib-2024-0023","pdf_url":"https://www.degruyter.com/document/doi/10.1515/jib-2024-0023/pdf","source":{"id":"https://openalex.org/S4393917359","display_name":"Berichte aus der medizinischen Informatik und Bioinformatik/Journal of integrative bioinformatics","issn_l":"1432-4385","issn":["1432-4385","1613-4516"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Integrative Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Quality Education","id":"https://metadata.un.org/sdg/4","score":0.8199999928474426}],"awards":[{"id":"https://openalex.org/G1181036220","display_name":null,"funder_award_id":"51654672","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G1616605873","display_name":null,"funder_award_id":"TRR 161","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G2463333092","display_name":null,"funder_award_id":"422037984","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G3801410842","display_name":null,"funder_award_id":"EXC 2117","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G4782918726","display_name":null,"funder_award_id":"42203798","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G4926056139","display_name":null,"funder_award_id":"251654672 \u2013 TRR 161","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G6401459825","display_name":null,"funder_award_id":"251654672","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"}],"funders":[{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4400524508.pdf"},"referenced_works_count":32,"referenced_works":["https://openalex.org/W43450471","https://openalex.org/W634834491","https://openalex.org/W1522860884","https://openalex.org/W1540664520","https://openalex.org/W1568387770","https://openalex.org/W1577228355","https://openalex.org/W1597991889","https://openalex.org/W1598860835","https://openalex.org/W1652453112","https://openalex.org/W1946371345","https://openalex.org/W1982799219","https://openalex.org/W1997952588","https://openalex.org/W1998829911","https://openalex.org/W2003741962","https://openalex.org/W2011115027","https://openalex.org/W2068109876","https://openalex.org/W2068146784","https://openalex.org/W2071353749","https://openalex.org/W2108036176","https://openalex.org/W2117088188","https://openalex.org/W2125434536","https://openalex.org/W2146055051","https://openalex.org/W2148014577","https://openalex.org/W2163670493","https://openalex.org/W2167482691","https://openalex.org/W2586254454","https://openalex.org/W2994917222","https://openalex.org/W3014273235","https://openalex.org/W3109735611","https://openalex.org/W4211141399","https://openalex.org/W4230696817","https://openalex.org/W4245891287"],"related_works":["https://openalex.org/W2616627668","https://openalex.org/W3137121595","https://openalex.org/W2062195135","https://openalex.org/W2051345519","https://openalex.org/W2102157173","https://openalex.org/W1991530724","https://openalex.org/W3083087975","https://openalex.org/W2023344535","https://openalex.org/W2383982204","https://openalex.org/W2087032481"],"abstract_inverted_index":{"We":[0],"present":[1],"a":[2,26,67],"method":[3,42,63],"for":[4,74],"the":[5,17,31,46],"layout":[6,29],"of":[7,20,35,48,61],"anatomical":[8,50],"structures":[9],"and":[10,51,79],"blood":[11],"vessels":[12],"based":[13],"on":[14],"information":[15],"from":[16],"Foundational":[18],"Model":[19],"Anatomy":[21],"(FMA).":[22],"Our":[23,41],"approach":[24],"integrates":[25],"novel":[27],"vascular":[28,52],"into":[30],"hierarchical":[32],"treemap":[33],"representation":[34],"anatomy":[36],"as":[37],"used":[38],"in":[39,70,76],"ApiNATOMY.":[40],"aims":[43],"to":[44],"improve":[45],"comprehension":[47],"complex":[49],"data":[53],"by":[54],"providing":[55],"readable":[56],"visual":[57],"representations.":[58],"The":[59],"effectiveness":[60],"our":[62],"is":[64],"demonstrated":[65],"through":[66],"prototype":[68],"developed":[69],"VANTED,":[71],"showing":[72],"potential":[73],"application":[75],"research,":[77],"education,":[78],"clinical":[80],"settings.":[81]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1}],"updated_date":"2026-03-21T08:13:44.787528","created_date":"2025-10-10T00:00:00"}