{"id":"https://openalex.org/W4293194479","doi":"https://doi.org/10.1515/jib-2022-0018","title":"KaIDA: a modular tool for assisting image annotation in deep learning","display_name":"KaIDA: a modular tool for assisting image annotation in deep learning","publication_year":2022,"publication_date":"2022-08-26","ids":{"openalex":"https://openalex.org/W4293194479","doi":"https://doi.org/10.1515/jib-2022-0018","pmid":"https://pubmed.ncbi.nlm.nih.gov/36017752"},"language":"en","primary_location":{"id":"doi:10.1515/jib-2022-0018","is_oa":true,"landing_page_url":"https://doi.org/10.1515/jib-2022-0018","pdf_url":"https://www.degruyter.com/document/doi/10.1515/jib-2022-0018/pdf","source":{"id":"https://openalex.org/S4393917359","display_name":"Berichte aus der medizinischen Informatik und Bioinformatik/Journal of integrative bioinformatics","issn_l":"1432-4385","issn":["1432-4385","1613-4516"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Integrative Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://www.degruyter.com/document/doi/10.1515/jib-2022-0018/pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5004470016","display_name":"Marcel P. Schilling","orcid":"https://orcid.org/0000-0001-7366-2134"},"institutions":[{"id":"https://openalex.org/I102335020","display_name":"Karlsruhe Institute of Technology","ror":"https://ror.org/04t3en479","country_code":"DE","type":"education","lineage":["https://openalex.org/I102335020","https://openalex.org/I1305996414"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Marcel P. Schilling","raw_affiliation_strings":["Institute for Automation and Applied Informatics, Karlsruhe Institute of Technology , D-76344 Eggenstein-Leopoldshafen , Germany"],"raw_orcid":"https://orcid.org/0000-0001-7366-2134","affiliations":[{"raw_affiliation_string":"Institute for Automation and Applied Informatics, Karlsruhe Institute of Technology , D-76344 Eggenstein-Leopoldshafen , Germany","institution_ids":["https://openalex.org/I102335020"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088696069","display_name":"Svenja Schmelzer","orcid":"https://orcid.org/0000-0003-4989-591X"},"institutions":[{"id":"https://openalex.org/I102335020","display_name":"Karlsruhe Institute of Technology","ror":"https://ror.org/04t3en479","country_code":"DE","type":"education","lineage":["https://openalex.org/I102335020","https://openalex.org/I1305996414"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Svenja Schmelzer","raw_affiliation_strings":["Institute for Automation and Applied Informatics, Karlsruhe Institute of Technology , D-76344 Eggenstein-Leopoldshafen , Germany"],"raw_orcid":"https://orcid.org/0000-0003-4989-591X","affiliations":[{"raw_affiliation_string":"Institute for Automation and Applied Informatics, Karlsruhe Institute of Technology , D-76344 Eggenstein-Leopoldshafen , Germany","institution_ids":["https://openalex.org/I102335020"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046431663","display_name":"Lukas Klinger","orcid":null},"institutions":[{"id":"https://openalex.org/I102335020","display_name":"Karlsruhe Institute of Technology","ror":"https://ror.org/04t3en479","country_code":"DE","type":"education","lineage":["https://openalex.org/I102335020","https://openalex.org/I1305996414"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Lukas Klinger","raw_affiliation_strings":["Institute for Automation and Applied Informatics, Karlsruhe Institute of Technology , D-76344 Eggenstein-Leopoldshafen , Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Automation and Applied Informatics, Karlsruhe Institute of Technology , D-76344 Eggenstein-Leopoldshafen , Germany","institution_ids":["https://openalex.org/I102335020"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5049462585","display_name":"Markus Reischl","orcid":"https://orcid.org/0000-0002-7780-6374"},"institutions":[{"id":"https://openalex.org/I102335020","display_name":"Karlsruhe Institute of Technology","ror":"https://ror.org/04t3en479","country_code":"DE","type":"education","lineage":["https://openalex.org/I102335020","https://openalex.org/I1305996414"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Markus Reischl","raw_affiliation_strings":["Institute for Automation and Applied Informatics, Karlsruhe Institute of Technology , D-76344 Eggenstein-Leopoldshafen , Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Automation and Applied Informatics, Karlsruhe Institute of Technology , D-76344 Eggenstein-Leopoldshafen , Germany","institution_ids":["https://openalex.org/I102335020"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5004470016"],"corresponding_institution_ids":["https://openalex.org/I102335020"],"apc_list":null,"apc_paid":{"value":1111,"currency":"EUR","value_usd":1198},"fwci":1.5276,"has_fulltext":true,"cited_by_count":12,"citation_normalized_percentile":{"value":0.85438864,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":98},"biblio":{"volume":"19","issue":"4","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9887999892234802,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9887999892234802,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10036","display_name":"Advanced Neural Network Applications","score":0.9866999983787537,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.986299991607666,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.8890060782432556},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8626901507377625},{"id":"https://openalex.org/keywords/automatic-image-annotation","display_name":"Automatic image annotation","score":0.8099198937416077},{"id":"https://openalex.org/keywords/modular-design","display_name":"Modular design","score":0.7472791075706482},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.5971835255622864},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5517421364784241},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.53177809715271},{"id":"https://openalex.org/keywords/image-retrieval","display_name":"Image retrieval","score":0.5155422687530518},{"id":"https://openalex.org/keywords/quality","display_name":"Quality (philosophy)","score":0.4474954307079315},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.4363119602203369},{"id":"https://openalex.org/keywords/image-processing","display_name":"Image processing","score":0.4272412657737732},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3869233727455139},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.37492549419403076},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3635767102241516},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3251575827598572},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.054383158683776855}],"concepts":[{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.8890060782432556},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8626901507377625},{"id":"https://openalex.org/C199579030","wikidata":"https://www.wikidata.org/wiki/Q2851778","display_name":"Automatic image annotation","level":4,"score":0.8099198937416077},{"id":"https://openalex.org/C101468663","wikidata":"https://www.wikidata.org/wiki/Q1620158","display_name":"Modular design","level":2,"score":0.7472791075706482},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.5971835255622864},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5517421364784241},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.53177809715271},{"id":"https://openalex.org/C1667742","wikidata":"https://www.wikidata.org/wiki/Q10927554","display_name":"Image retrieval","level":3,"score":0.5155422687530518},{"id":"https://openalex.org/C2779530757","wikidata":"https://www.wikidata.org/wiki/Q1207505","display_name":"Quality (philosophy)","level":2,"score":0.4474954307079315},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.4363119602203369},{"id":"https://openalex.org/C9417928","wikidata":"https://www.wikidata.org/wiki/Q1070689","display_name":"Image processing","level":3,"score":0.4272412657737732},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3869233727455139},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.37492549419403076},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3635767102241516},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3251575827598572},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.054383158683776855},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1515/jib-2022-0018","is_oa":true,"landing_page_url":"https://doi.org/10.1515/jib-2022-0018","pdf_url":"https://www.degruyter.com/document/doi/10.1515/jib-2022-0018/pdf","source":{"id":"https://openalex.org/S4393917359","display_name":"Berichte aus der medizinischen Informatik und Bioinformatik/Journal of integrative bioinformatics","issn_l":"1432-4385","issn":["1432-4385","1613-4516"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Integrative Bioinformatics","raw_type":"journal-article"},{"id":"pmid:36017752","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36017752","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of integrative bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:9e5c426941d541ddb3761db86b104779","is_oa":false,"landing_page_url":"https://doaj.org/article/9e5c426941d541ddb3761db86b104779","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Integrative Bioinformatics, Vol 19, Iss 4, Pp 128-44 (2022)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:9800041","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9800041","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Integr Bioinform","raw_type":"Text"},{"id":"pmh:oai:share.osf.io:E017A-702-FD6","is_oa":false,"landing_page_url":"http://osf.io/5zcye/","pdf_url":null,"source":{"id":"https://openalex.org/S4306401127","display_name":"OSF Preprints (OSF Preprints)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2799848540","host_organization_name":"Center for Open Science","host_organization_lineage":["https://openalex.org/I2799848540"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"project"}],"best_oa_location":{"id":"doi:10.1515/jib-2022-0018","is_oa":true,"landing_page_url":"https://doi.org/10.1515/jib-2022-0018","pdf_url":"https://www.degruyter.com/document/doi/10.1515/jib-2022-0018/pdf","source":{"id":"https://openalex.org/S4393917359","display_name":"Berichte aus der medizinischen Informatik und Bioinformatik/Journal of integrative bioinformatics","issn_l":"1432-4385","issn":["1432-4385","1613-4516"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Integrative Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320311048","display_name":"Karlsruhe Institute of Technology","ror":"https://ror.org/04t3en479"},{"id":"https://openalex.org/F4320321114","display_name":"Bundesministerium f\u00fcr Bildung und Forschung","ror":"https://ror.org/04pz7b180"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4293194479.pdf","grobid_xml":"https://content.openalex.org/works/W4293194479.grobid-xml"},"referenced_works_count":24,"referenced_works":["https://openalex.org/W1901129140","https://openalex.org/W2031342017","https://openalex.org/W2167279371","https://openalex.org/W2194775991","https://openalex.org/W2302501749","https://openalex.org/W2757254843","https://openalex.org/W2940612399","https://openalex.org/W2944051875","https://openalex.org/W2963946669","https://openalex.org/W2974655400","https://openalex.org/W2975280225","https://openalex.org/W2975634117","https://openalex.org/W2980998394","https://openalex.org/W3036586801","https://openalex.org/W3093690432","https://openalex.org/W3111521801","https://openalex.org/W3163126814","https://openalex.org/W3199584984","https://openalex.org/W3203864625","https://openalex.org/W3205626500","https://openalex.org/W3215582371","https://openalex.org/W3215820471","https://openalex.org/W4206016473","https://openalex.org/W4206472685"],"related_works":["https://openalex.org/W3177930984","https://openalex.org/W2052697133","https://openalex.org/W2119028572","https://openalex.org/W2376984068","https://openalex.org/W2152482390","https://openalex.org/W2365617273","https://openalex.org/W2076896210","https://openalex.org/W2093596879","https://openalex.org/W2506386910","https://openalex.org/W2117928543"],"abstract_inverted_index":{"Deep":[0],"learning":[1],"models":[2],"achieve":[3],"high-quality":[4],"results":[5],"in":[6,62],"image":[7,64],"processing.":[8],"However,":[9],"to":[10,69,77],"robustly":[11],"optimize":[12],"parameters":[13],"of":[14],"deep":[15],"neural":[16],"networks,":[17],"large":[18],"annotated":[19],"datasets":[20],"are":[21],"needed.":[22],"Image":[23,51],"annotation":[24,61,84],"is":[25,38,67,93],"often":[26],"performed":[27],"manually":[28],"by":[29],"experts":[30],"without":[31],"a":[32],"comprehensive":[33],"tool":[34],"for":[35,56],"assistance":[36],"which":[37],"time-":[39],"consuming,":[40],"burdensome,":[41],"and":[42,86],"not":[43],"intuitive.":[44],"Using":[45],"the":[46,57],"here":[47],"presented":[48],"modular":[49],"Karlsruhe":[50],"Data":[52],"Annotation":[53],"(KaIDA)":[54],"tool,":[55],"first":[58],"time":[59],"assisted":[60],"various":[63],"processing":[65],"tasks":[66],"possible":[68],"support":[70],"users":[71],"during":[72],"this":[73],"process.":[74],"It":[75],"aims":[76],"simplify":[78],"annotation,":[79],"increase":[80],"user":[81],"efficiency,":[82],"enhance":[83],"quality,":[85],"provide":[87],"additional":[88],"useful":[89],"annotation-related":[90],"functionalities.":[91],"KaIDA":[92],"available":[94],"open-source":[95],"at":[96],"https://git.scc.kit.edu/sc1357/kaida.":[97]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":6}],"updated_date":"2026-05-06T08:25:59.206177","created_date":"2025-10-10T00:00:00"}
