{"id":"https://openalex.org/W4387708963","doi":"https://doi.org/10.1515/auto-2023-0013","title":"A fully automated touch-response behavior inspection pipeline on zebrafish larvae","display_name":"A fully automated touch-response behavior inspection pipeline on zebrafish larvae","publication_year":2023,"publication_date":"2023-10-01","ids":{"openalex":"https://openalex.org/W4387708963","doi":"https://doi.org/10.1515/auto-2023-0013"},"language":"en","primary_location":{"id":"doi:10.1515/auto-2023-0013","is_oa":true,"landing_page_url":"http://dx.doi.org/10.1515/auto-2023-0013","pdf_url":"https://www.degruyter.com/document/doi/10.1515/auto-2023-0013/pdf","source":{"id":"https://openalex.org/S4210170077","display_name":"at - Automatisierungstechnik","issn_l":"0178-2312","issn":["0178-2312","2196-677X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319967","host_organization_name":"R. Oldenbourg Verlag","host_organization_lineage":["https://openalex.org/P4310319967"],"host_organization_lineage_names":["R. Oldenbourg Verlag"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"at - Automatisierungstechnik","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","datacite"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://www.degruyter.com/document/doi/10.1515/auto-2023-0013/pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5031258176","display_name":"Yanke Wang","orcid":"https://orcid.org/0000-0003-1740-5269"},"institutions":[{"id":"https://openalex.org/I102335020","display_name":"Karlsruhe Institute of Technology","ror":"https://ror.org/04t3en479","country_code":"DE","type":"education","lineage":["https://openalex.org/I102335020","https://openalex.org/I1305996414"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Yanke Wang","raw_affiliation_strings":["Institute for Automation and Applied Informatics, Karlsruhe Institute of Technology , Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen , Germany"],"affiliations":[{"raw_affiliation_string":"Institute for Automation and Applied Informatics, Karlsruhe Institute of Technology , Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen , Germany","institution_ids":["https://openalex.org/I102335020"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051742015","display_name":"Christian Pylatiuk","orcid":"https://orcid.org/0000-0002-3507-7134"},"institutions":[{"id":"https://openalex.org/I102335020","display_name":"Karlsruhe Institute of Technology","ror":"https://ror.org/04t3en479","country_code":"DE","type":"education","lineage":["https://openalex.org/I102335020","https://openalex.org/I1305996414"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Christian Pylatiuk","raw_affiliation_strings":["Institute for Automation and Applied Informatics, Karlsruhe Institute of Technology , Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen , Germany"],"affiliations":[{"raw_affiliation_string":"Institute for Automation and Applied Informatics, Karlsruhe Institute of Technology , Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen , Germany","institution_ids":["https://openalex.org/I102335020"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001459055","display_name":"Ralf Mikut","orcid":"https://orcid.org/0000-0001-9100-5496"},"institutions":[{"id":"https://openalex.org/I102335020","display_name":"Karlsruhe Institute of Technology","ror":"https://ror.org/04t3en479","country_code":"DE","type":"education","lineage":["https://openalex.org/I102335020","https://openalex.org/I1305996414"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Ralf Mikut","raw_affiliation_strings":["Institute for Automation and Applied Informatics, Karlsruhe Institute of Technology , Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen , Germany"],"affiliations":[{"raw_affiliation_string":"Institute for Automation and Applied Informatics, Karlsruhe Institute of Technology , Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen , Germany","institution_ids":["https://openalex.org/I102335020"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5107635633","display_name":"Ravindra Peravali","orcid":"https://orcid.org/0000-0002-8168-5392"},"institutions":[{"id":"https://openalex.org/I102335020","display_name":"Karlsruhe Institute of Technology","ror":"https://ror.org/04t3en479","country_code":"DE","type":"education","lineage":["https://openalex.org/I102335020","https://openalex.org/I1305996414"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Ravindra Peravali","raw_affiliation_strings":["Institute for Biological and Chemical Systems, Karlsruhe Institute of Technology , Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen , Germany"],"affiliations":[{"raw_affiliation_string":"Institute for Biological and Chemical Systems, Karlsruhe Institute of Technology , Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen , Germany","institution_ids":["https://openalex.org/I102335020"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5049462585","display_name":"Markus Reischl","orcid":"https://orcid.org/0000-0002-7780-6374"},"institutions":[{"id":"https://openalex.org/I102335020","display_name":"Karlsruhe Institute of Technology","ror":"https://ror.org/04t3en479","country_code":"DE","type":"education","lineage":["https://openalex.org/I102335020","https://openalex.org/I1305996414"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Markus Reischl","raw_affiliation_strings":["Institute for Automation and Applied Informatics, Karlsruhe Institute of Technology , Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen , Germany"],"affiliations":[{"raw_affiliation_string":"Institute for Automation and Applied Informatics, Karlsruhe Institute of Technology , Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen , Germany","institution_ids":["https://openalex.org/I102335020"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5031258176"],"corresponding_institution_ids":["https://openalex.org/I102335020"],"apc_list":null,"apc_paid":{"value":2000,"currency":"EUR","value_usd":2157},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.31355439,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"71","issue":"10","first_page":"845","last_page":"852"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11685","display_name":"Zebrafish Biomedical Research Applications","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1307","display_name":"Cell Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11685","display_name":"Zebrafish Biomedical Research Applications","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1307","display_name":"Cell Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12697","display_name":"Water Quality Monitoring Technologies","score":0.989799976348877,"subfield":{"id":"https://openalex.org/subfields/2312","display_name":"Water Science and Technology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10302","display_name":"Fish Ecology and Management Studies","score":0.9387000203132629,"subfield":{"id":"https://openalex.org/subfields/2309","display_name":"Nature and Landscape Conservation"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.7816699743270874},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6901533603668213},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.4667637050151825},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.457397997379303},{"id":"https://openalex.org/keywords/real-time-computing","display_name":"Real-time computing","score":0.42633676528930664},{"id":"https://openalex.org/keywords/tracking","display_name":"Tracking (education)","score":0.41023287177085876},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.4053528904914856},{"id":"https://openalex.org/keywords/computer-hardware","display_name":"Computer hardware","score":0.3230169415473938},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.07500949501991272}],"concepts":[{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.7816699743270874},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6901533603668213},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.4667637050151825},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.457397997379303},{"id":"https://openalex.org/C79403827","wikidata":"https://www.wikidata.org/wiki/Q3988","display_name":"Real-time computing","level":1,"score":0.42633676528930664},{"id":"https://openalex.org/C2775936607","wikidata":"https://www.wikidata.org/wiki/Q466845","display_name":"Tracking (education)","level":2,"score":0.41023287177085876},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.4053528904914856},{"id":"https://openalex.org/C9390403","wikidata":"https://www.wikidata.org/wiki/Q3966","display_name":"Computer hardware","level":1,"score":0.3230169415473938},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.07500949501991272},{"id":"https://openalex.org/C19417346","wikidata":"https://www.wikidata.org/wiki/Q7922","display_name":"Pedagogy","level":1,"score":0.0},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1515/auto-2023-0013","is_oa":true,"landing_page_url":"http://dx.doi.org/10.1515/auto-2023-0013","pdf_url":"https://www.degruyter.com/document/doi/10.1515/auto-2023-0013/pdf","source":{"id":"https://openalex.org/S4210170077","display_name":"at - Automatisierungstechnik","issn_l":"0178-2312","issn":["0178-2312","2196-677X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319967","host_organization_name":"R. Oldenbourg Verlag","host_organization_lineage":["https://openalex.org/P4310319967"],"host_organization_lineage_names":["R. Oldenbourg Verlag"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"at - Automatisierungstechnik","raw_type":"journal-article"},{"id":"pmh:oai:EVASTAR-Karlsruhe.de:1000163136","is_oa":true,"landing_page_url":"https://publikationen.bibliothek.kit.edu/1000163136","pdf_url":"https://publikationen.bibliothek.kit.edu/1000163136/151507022","source":{"id":"https://openalex.org/S4306401992","display_name":"Repository KITopen (Karlsruhe Institute of Technology)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I102335020","host_organization_name":"Karlsruhe Institute of Technology","host_organization_lineage":["https://openalex.org/I102335020"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"at - Automatisierungstechnik, 71 (10), 845\u2013852","raw_type":"doc-type:article"},{"id":"doi:10.5445/ir/1000163136","is_oa":true,"landing_page_url":"https://doi.org/10.5445/ir/1000163136","pdf_url":null,"source":{"id":"https://openalex.org/S7407052948","display_name":"KITopen","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article-journal"}],"best_oa_location":{"id":"doi:10.1515/auto-2023-0013","is_oa":true,"landing_page_url":"http://dx.doi.org/10.1515/auto-2023-0013","pdf_url":"https://www.degruyter.com/document/doi/10.1515/auto-2023-0013/pdf","source":{"id":"https://openalex.org/S4210170077","display_name":"at - Automatisierungstechnik","issn_l":"0178-2312","issn":["0178-2312","2196-677X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319967","host_organization_name":"R. Oldenbourg Verlag","host_organization_lineage":["https://openalex.org/P4310319967"],"host_organization_lineage_names":["R. Oldenbourg Verlag"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"at - Automatisierungstechnik","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4387708963.pdf","grobid_xml":"https://content.openalex.org/works/W4387708963.grobid-xml"},"referenced_works_count":21,"referenced_works":["https://openalex.org/W1578285471","https://openalex.org/W1901129140","https://openalex.org/W2001862790","https://openalex.org/W2030169264","https://openalex.org/W2044746434","https://openalex.org/W2077151773","https://openalex.org/W2295996606","https://openalex.org/W2412679964","https://openalex.org/W2770704715","https://openalex.org/W2774749442","https://openalex.org/W2785380011","https://openalex.org/W2789201985","https://openalex.org/W2791864979","https://openalex.org/W2806838025","https://openalex.org/W2875504432","https://openalex.org/W2895874668","https://openalex.org/W2908783938","https://openalex.org/W2922877717","https://openalex.org/W3195028777","https://openalex.org/W3217097144","https://openalex.org/W4206713469"],"related_works":["https://openalex.org/W2084086966","https://openalex.org/W3037187668","https://openalex.org/W2023861399","https://openalex.org/W2380685755","https://openalex.org/W3021540629","https://openalex.org/W2252100032","https://openalex.org/W2963436428","https://openalex.org/W3171253712","https://openalex.org/W1200423363","https://openalex.org/W4388446985"],"abstract_inverted_index":{"Abstract":[0],"A":[1],"touch-evoked":[2],"response":[3],"of":[4,12,106],"zebrafish":[5],"larvae":[6],"provides":[7],"information":[8],"on":[9,50],"the":[10,13,36,64,71,103,107],"mechanism":[11],"gene":[14],"functional":[15],"expressions.":[16],"Recently,":[17],"an":[18],"automated":[19,43],"system":[20],"has":[21],"been":[22],"developed":[23],"for":[24,68],"precise":[25],"and":[26,53,70,85,97,101],"repeated":[27],"touch-response":[28,45,80],"experimentation":[29],"with":[30,57],"minor":[31],"human":[32],"intervention.":[33],"To":[34],"quantify":[35],"collected":[37],"data,":[38],"we":[39],"propose":[40],"a":[41],"fully":[42],"multi-larvae":[44],"behavior":[46,81],"inspection":[47,66,82],"pipeline":[48],"based":[49],"larva":[51],"tracking":[52],"segmentation.":[54],"Experimental":[55],"data":[56],"different":[58],"treatments":[59],"is":[60],"analyzed":[61],"by":[62],"using":[63],"proposed":[65],"platform":[67,76],"demonstration,":[69],"result":[72],"proves":[73],"that":[74],"this":[75,98],"can":[77],"generate":[78],"comparable":[79],"readouts":[83],"efficiently":[84],"automatically.":[86],"The":[87],"initial":[88],"results":[89],"were":[90],"published":[91],"in":[92],"31.":[93],"Workshop":[94],"Computational":[95],"Intelligence,":[96],"paper":[99],"summarizes":[100],"extends":[102],"main":[104],"work":[105],"respective":[108],"article.":[109]},"counts_by_year":[],"updated_date":"2026-03-10T16:38:18.471706","created_date":"2025-10-10T00:00:00"}
