{"id":"https://openalex.org/W2751102253","doi":"https://doi.org/10.1504/ijdmb.2017.10007505","title":"BioNimbuZ: a federated cloud platform for bioinformatics applications","display_name":"BioNimbuZ: a federated cloud platform for bioinformatics applications","publication_year":2017,"publication_date":"2017-01-01","ids":{"openalex":"https://openalex.org/W2751102253","doi":"https://doi.org/10.1504/ijdmb.2017.10007505","mag":"2751102253"},"language":"en","primary_location":{"id":"doi:10.1504/ijdmb.2017.10007505","is_oa":false,"landing_page_url":"https://doi.org/10.1504/ijdmb.2017.10007505","pdf_url":null,"source":{"id":"https://openalex.org/S35771696","display_name":"International Journal of Data Mining and Bioinformatics","issn_l":"1748-5673","issn":["1748-5673","1748-5681"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310317825","host_organization_name":"Inderscience Publishers","host_organization_lineage":["https://openalex.org/P4310317825"],"host_organization_lineage_names":["Inderscience Publishers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Data Mining and Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5071276748","display_name":"Maria Em\u00edlia M. T. Walter","orcid":"https://orcid.org/0000-0001-6822-931X"},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":true,"raw_author_name":"Maria Em\u00edlia Walter","raw_affiliation_strings":["Department of Computer Science, University of Bras\u00edlia - UnB, Federal District, Brasilia, Brazil"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Bras\u00edlia - UnB, Federal District, Brasilia, Brazil","institution_ids":["https://openalex.org/I150729083"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054089208","display_name":"Maristela Holanda","orcid":"https://orcid.org/0000-0002-0883-2579"},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Maristela Holanda","raw_affiliation_strings":["Department of Computer Science, University of Bras\u00edlia - UnB, Federal District, Brasilia, Brazil"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Bras\u00edlia - UnB, Federal District, Brasilia, Brazil","institution_ids":["https://openalex.org/I150729083"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007795215","display_name":"Guilherme Fay Vergara","orcid":"https://orcid.org/0000-0002-4551-2240"},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Guilherme Vergara","raw_affiliation_strings":["Department of Computer Science, University of Bras\u00edlia - UnB, Federal District, Brasilia, Brazil"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Bras\u00edlia - UnB, Federal District, Brasilia, Brazil","institution_ids":["https://openalex.org/I150729083"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082309320","display_name":"Michel Rosa","orcid":"https://orcid.org/0000-0002-0860-1834"},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Michel Rosa","raw_affiliation_strings":["Department of Computer Science, University of Bras\u00edlia - UnB, Federal District, Brasilia, Brazil"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Bras\u00edlia - UnB, Federal District, Brasilia, Brazil","institution_ids":["https://openalex.org/I150729083"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031701924","display_name":"Alet\u00e9ia Ara\u00fajo","orcid":"https://orcid.org/0000-0003-4645-6700"},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Alet\u00e9ia Ara\u00fajo","raw_affiliation_strings":["Department of Computer Science, University of Bras\u00edlia - UnB, Federal District, Brasilia, Brazil"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Bras\u00edlia - UnB, Federal District, Brasilia, Brazil","institution_ids":["https://openalex.org/I150729083"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5011123984","display_name":"Breno Moura","orcid":null},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Breno Moura","raw_affiliation_strings":["Department of Computer Science, University of Bras\u00edlia - UnB, Federal District, Brasilia, Brazil"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Bras\u00edlia - UnB, Federal District, Brasilia, Brazil","institution_ids":["https://openalex.org/I150729083"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5071276748"],"corresponding_institution_ids":["https://openalex.org/I150729083"],"apc_list":null,"apc_paid":null,"fwci":1.8971,"has_fulltext":false,"cited_by_count":4,"citation_normalized_percentile":{"value":0.90739935,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"18","issue":"2","first_page":"144","last_page":"144"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9961000084877014,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9961000084877014,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9879999756813049,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9872999787330627,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.8602437973022461},{"id":"https://openalex.org/keywords/cloud-computing","display_name":"Cloud computing","score":0.8483906984329224},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7997816801071167},{"id":"https://openalex.org/keywords/workload","display_name":"Workload","score":0.7250465154647827},{"id":"https://openalex.org/keywords/throughput","display_name":"Throughput","score":0.4704424738883972},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.43481117486953735},{"id":"https://openalex.org/keywords/distributed-computing","display_name":"Distributed computing","score":0.40211236476898193},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.3577243983745575},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.33891594409942627},{"id":"https://openalex.org/keywords/wireless","display_name":"Wireless","score":0.06821072101593018}],"concepts":[{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.8602437973022461},{"id":"https://openalex.org/C79974875","wikidata":"https://www.wikidata.org/wiki/Q483639","display_name":"Cloud computing","level":2,"score":0.8483906984329224},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7997816801071167},{"id":"https://openalex.org/C2778476105","wikidata":"https://www.wikidata.org/wiki/Q628539","display_name":"Workload","level":2,"score":0.7250465154647827},{"id":"https://openalex.org/C157764524","wikidata":"https://www.wikidata.org/wiki/Q1383412","display_name":"Throughput","level":3,"score":0.4704424738883972},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.43481117486953735},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.40211236476898193},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.3577243983745575},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.33891594409942627},{"id":"https://openalex.org/C555944384","wikidata":"https://www.wikidata.org/wiki/Q249","display_name":"Wireless","level":2,"score":0.06821072101593018}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1504/ijdmb.2017.10007505","is_oa":false,"landing_page_url":"https://doi.org/10.1504/ijdmb.2017.10007505","pdf_url":null,"source":{"id":"https://openalex.org/S35771696","display_name":"International Journal of Data Mining and Bioinformatics","issn_l":"1748-5673","issn":["1748-5673","1748-5681"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310317825","host_organization_name":"Inderscience Publishers","host_organization_lineage":["https://openalex.org/P4310317825"],"host_organization_lineage_names":["Inderscience Publishers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Data Mining and Bioinformatics","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.5699999928474426,"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W986318368","https://openalex.org/W2384410913","https://openalex.org/W2352878646","https://openalex.org/W2990194547","https://openalex.org/W2004734601","https://openalex.org/W2130149817","https://openalex.org/W1480123525","https://openalex.org/W2414054180","https://openalex.org/W4214892316","https://openalex.org/W2547038763"],"abstract_inverted_index":{"Challenges":[0],"in":[1,119],"bioinformatics":[2,90,106],"include":[3],"tools":[4,26],"to":[5,11,88],"treat":[6],"large-scale":[7],"processing,":[8],"mainly":[9],"due":[10],"the":[12,52,63,77,112],"large":[13],"volumes":[14],"of":[15,24,54,65],"data":[16],"generated":[17,110],"by":[18,111],"high-throughput":[19],"sequencing":[20],"machines.":[21],"However,":[22],"many":[23],"these":[25,66],"are":[27,47,58],"not":[28,33,69],"user":[29],"friendly,":[30],"and":[31,45,49,62,94],"do":[32,68],"distribute":[34],"their":[35,72],"workloads":[36],"properly.":[37],"In":[38],"federated":[39,78],"cloud":[40,79],"environments,":[41],"even":[42],"though":[43],"services":[44],"resources":[46],"shared":[48],"available":[50],"online,":[51],"processes":[53,67],"a":[55,84,104],"workflow":[56],"execution":[57],"almost":[59],"entirely":[60],"unautomated,":[61],"majority":[64],"efficiently":[70],"balance":[71],"workloads.":[73],"This":[74],"paper":[75],"presents":[76],"platform":[80,86],"called,":[81],"BioNimbuZ":[82],"-":[83],"hybrid":[85],"designed":[87],"execute":[89],"applications":[91],"easily,":[92],"efficiently,":[93],"with":[95,108],"good":[96,117],"workload":[97],"balance.":[98],"Our":[99],"tests":[100],"were":[101],"performed":[102],"using":[103],"real":[105],"workflow,":[107],"fragments":[109],"illumina":[113],"sequencer,":[114],"having":[115],"achieved":[116],"performance":[118],"practice.":[120]},"counts_by_year":[{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
