{"id":"https://openalex.org/W4238795878","doi":"https://doi.org/10.1504/ijdmb.2016.10000565","title":"Comparative studies for developing protein based cancer prediction model to maximise the ROC-AUC with various variable selection methods","display_name":"Comparative studies for developing protein based cancer prediction model to maximise the ROC-AUC with various variable selection methods","publication_year":2016,"publication_date":"2016-01-01","ids":{"openalex":"https://openalex.org/W4238795878","doi":"https://doi.org/10.1504/ijdmb.2016.10000565"},"language":"en","primary_location":{"id":"doi:10.1504/ijdmb.2016.10000565","is_oa":false,"landing_page_url":"https://doi.org/10.1504/ijdmb.2016.10000565","pdf_url":null,"source":{"id":"https://openalex.org/S35771696","display_name":"International Journal of Data Mining and Bioinformatics","issn_l":"1748-5673","issn":["1748-5673","1748-5681"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310317825","host_organization_name":"Inderscience Publishers","host_organization_lineage":["https://openalex.org/P4310317825"],"host_organization_lineage_names":["Inderscience Publishers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Data Mining and Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100643662","display_name":"Taesung Park","orcid":"https://orcid.org/0000-0002-8294-590X"},"institutions":[{"id":"https://openalex.org/I158743462","display_name":"Seoul National University of Education","ror":"https://ror.org/01xts9v65","country_code":"KR","type":"education","lineage":["https://openalex.org/I158743462"]},{"id":"https://openalex.org/I139264467","display_name":"Seoul National University","ror":"https://ror.org/04h9pn542","country_code":"KR","type":"education","lineage":["https://openalex.org/I139264467"]}],"countries":["KR"],"is_corresponding":true,"raw_author_name":"Taesung Park","raw_affiliation_strings":["Department of Statistics, Seoul National University, Seoul, South Korea; Interdisciplinary program in Bioinformatics, Seoul National University, Seoul, South Korea","Interdisciplinary program in Bioinformatics, Seoul National University, Seoul, South Korea","Department of Statistics, Seoul National University, Seoul, South Korea"],"affiliations":[{"raw_affiliation_string":"Department of Statistics, Seoul National University, Seoul, South Korea; Interdisciplinary program in Bioinformatics, Seoul National University, Seoul, South Korea","institution_ids":["https://openalex.org/I139264467","https://openalex.org/I158743462"]},{"raw_affiliation_string":"Interdisciplinary program in Bioinformatics, Seoul National University, Seoul, South Korea","institution_ids":["https://openalex.org/I139264467"]},{"raw_affiliation_string":"Department of Statistics, Seoul National University, Seoul, South Korea","institution_ids":["https://openalex.org/I139264467"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034909134","display_name":"Seungyeoun Lee","orcid":"https://orcid.org/0000-0001-7941-8933"},"institutions":[{"id":"https://openalex.org/I28777354","display_name":"Sejong University","ror":"https://ror.org/00aft1q37","country_code":"KR","type":"education","lineage":["https://openalex.org/I28777354"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Seungyeoun Lee","raw_affiliation_strings":["Department of Mathematics and Statistics, Sejong University, Seoul, South Korea"],"affiliations":[{"raw_affiliation_string":"Department of Mathematics and Statistics, Sejong University, Seoul, South Korea","institution_ids":["https://openalex.org/I28777354"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100395859","display_name":"Youngsoo Kim","orcid":"https://orcid.org/0000-0001-8881-0662"},"institutions":[{"id":"https://openalex.org/I139264467","display_name":"Seoul National University","ror":"https://ror.org/04h9pn542","country_code":"KR","type":"education","lineage":["https://openalex.org/I139264467"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Youngsoo Kim","raw_affiliation_strings":["Department of Biomedical Engineering, Seoul National University, Seoul, South Korea","Department of Statistics, Seoul National University, Seoul, South Korea"],"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Seoul National University, Seoul, South Korea","institution_ids":["https://openalex.org/I139264467"]},{"raw_affiliation_string":"Department of Statistics, Seoul National University, Seoul, South Korea","institution_ids":["https://openalex.org/I139264467"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100441148","display_name":"Hyunsoo Kim","orcid":"https://orcid.org/0000-0002-8441-3376"},"institutions":[{"id":"https://openalex.org/I139264467","display_name":"Seoul National University","ror":"https://ror.org/04h9pn542","country_code":"KR","type":"education","lineage":["https://openalex.org/I139264467"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Hyunsoo Kim","raw_affiliation_strings":["Department of Biomedical Engineering, Seoul National University, Seoul, South Korea"],"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Seoul National University, Seoul, South Korea","institution_ids":["https://openalex.org/I139264467"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035117222","display_name":"Wooil Kwon","orcid":null},"institutions":[{"id":"https://openalex.org/I2802835388","display_name":"Seoul National University Hospital","ror":"https://ror.org/01z4nnt86","country_code":"KR","type":"healthcare","lineage":["https://openalex.org/I139264467","https://openalex.org/I2802835388"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Wooil Kwon","raw_affiliation_strings":["Department of Surgery, Seoul National University Hospital, Seoul, South Korea"],"affiliations":[{"raw_affiliation_string":"Department of Surgery, Seoul National University Hospital, Seoul, South Korea","institution_ids":["https://openalex.org/I2802835388"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112761049","display_name":"Jin Young Jang","orcid":null},"institutions":[{"id":"https://openalex.org/I2802835388","display_name":"Seoul National University Hospital","ror":"https://ror.org/01z4nnt86","country_code":"KR","type":"healthcare","lineage":["https://openalex.org/I139264467","https://openalex.org/I2802835388"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Jin Young Jang","raw_affiliation_strings":["Department of Surgery, Seoul National University Hospital, Seoul, South Korea"],"affiliations":[{"raw_affiliation_string":"Department of Surgery, Seoul National University Hospital, Seoul, South Korea","institution_ids":["https://openalex.org/I2802835388"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048617748","display_name":"Sun\u2010Whe Kim","orcid":"https://orcid.org/0000-0001-6315-6019"},"institutions":[{"id":"https://openalex.org/I2802835388","display_name":"Seoul National University Hospital","ror":"https://ror.org/01z4nnt86","country_code":"KR","type":"healthcare","lineage":["https://openalex.org/I139264467","https://openalex.org/I2802835388"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Sun Whe Kim","raw_affiliation_strings":["Department of Surgery, Seoul National University Hospital, Seoul, South Korea"],"affiliations":[{"raw_affiliation_string":"Department of Surgery, Seoul National University Hospital, Seoul, South Korea","institution_ids":["https://openalex.org/I2802835388"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110319592","display_name":"Sung Gon Yi","orcid":null},"institutions":[{"id":"https://openalex.org/I134353371","display_name":"SK Group (South Korea)","ror":"https://ror.org/03696td91","country_code":"KR","type":"company","lineage":["https://openalex.org/I134353371"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Sung Gon Yi","raw_affiliation_strings":["IVD Business Unit SK Telecom, Seoul, South Korea"],"affiliations":[{"raw_affiliation_string":"IVD Business Unit SK Telecom, Seoul, South Korea","institution_ids":["https://openalex.org/I134353371"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013138833","display_name":"Junghyun Namkung","orcid":"https://orcid.org/0000-0002-0246-0065"},"institutions":[{"id":"https://openalex.org/I134353371","display_name":"SK Group (South Korea)","ror":"https://ror.org/03696td91","country_code":"KR","type":"company","lineage":["https://openalex.org/I134353371"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Junghyun Namkung","raw_affiliation_strings":["IVD Business Unit SK Telecom, Seoul, South Korea"],"affiliations":[{"raw_affiliation_string":"IVD Business Unit SK Telecom, Seoul, South Korea","institution_ids":["https://openalex.org/I134353371"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029581936","display_name":"Sangjo Han","orcid":"https://orcid.org/0000-0002-7644-3671"},"institutions":[{"id":"https://openalex.org/I134353371","display_name":"SK Group (South Korea)","ror":"https://ror.org/03696td91","country_code":"KR","type":"company","lineage":["https://openalex.org/I134353371"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Sangjo Han","raw_affiliation_strings":["IVD Business Unit SK Telecom, Seoul, South Korea"],"affiliations":[{"raw_affiliation_string":"IVD Business Unit SK Telecom, Seoul, South Korea","institution_ids":["https://openalex.org/I134353371"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028780443","display_name":"Yongkang Kim","orcid":"https://orcid.org/0000-0002-8837-2620"},"institutions":[{"id":"https://openalex.org/I139264467","display_name":"Seoul National University","ror":"https://ror.org/04h9pn542","country_code":"KR","type":"education","lineage":["https://openalex.org/I139264467"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Yongkang Kim","raw_affiliation_strings":["Department of Biomedical Engineering, Seoul National University, Seoul, South Korea","Department of Statistics, Seoul National University, Seoul, South Korea"],"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Seoul National University, Seoul, South Korea","institution_ids":["https://openalex.org/I139264467"]},{"raw_affiliation_string":"Department of Statistics, Seoul National University, Seoul, South Korea","institution_ids":["https://openalex.org/I139264467"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102775755","display_name":"Yonghwan Choi","orcid":"https://orcid.org/0000-0001-5231-2434"},"institutions":[{"id":"https://openalex.org/I134353371","display_name":"SK Group (South Korea)","ror":"https://ror.org/03696td91","country_code":"KR","type":"company","lineage":["https://openalex.org/I134353371"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Yonghwan Choi","raw_affiliation_strings":["IVD Business Unit SK Telecom, Seoul, South Korea"],"affiliations":[{"raw_affiliation_string":"IVD Business Unit SK Telecom, Seoul, South Korea","institution_ids":["https://openalex.org/I134353371"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5109068530","display_name":"Min Seok Kwon","orcid":null},"institutions":[{"id":"https://openalex.org/I139264467","display_name":"Seoul National University","ror":"https://ror.org/04h9pn542","country_code":"KR","type":"education","lineage":["https://openalex.org/I139264467"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Min Seok Kwon","raw_affiliation_strings":["Interdisciplinary program in Bioinformatics, Seoul National University, Seoul, South Korea"],"affiliations":[{"raw_affiliation_string":"Interdisciplinary program in Bioinformatics, Seoul National University, Seoul, South Korea","institution_ids":["https://openalex.org/I139264467"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":13,"corresponding_author_ids":["https://openalex.org/A5100643662"],"corresponding_institution_ids":["https://openalex.org/I139264467","https://openalex.org/I158743462"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.21018459,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"16","issue":"1","first_page":"64","last_page":"64"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9894999861717224,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9894999861717224,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.977400004863739,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11396","display_name":"Artificial Intelligence in Healthcare","score":0.9745000004768372,"subfield":{"id":"https://openalex.org/subfields/3605","display_name":"Health Information Management"},"field":{"id":"https://openalex.org/fields/36","display_name":"Health Professions"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/feature-selection","display_name":"Feature selection","score":0.8207775950431824},{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.7140535712242126},{"id":"https://openalex.org/keywords/selection","display_name":"Selection (genetic algorithm)","score":0.6958786249160767},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6082239151000977},{"id":"https://openalex.org/keywords/receiver-operating-characteristic","display_name":"Receiver operating characteristic","score":0.5975360870361328},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4397762417793274},{"id":"https://openalex.org/keywords/model-selection","display_name":"Model selection","score":0.4115833342075348},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4103219509124756},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4031546711921692}],"concepts":[{"id":"https://openalex.org/C148483581","wikidata":"https://www.wikidata.org/wiki/Q446488","display_name":"Feature selection","level":2,"score":0.8207775950431824},{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.7140535712242126},{"id":"https://openalex.org/C81917197","wikidata":"https://www.wikidata.org/wiki/Q628760","display_name":"Selection (genetic algorithm)","level":2,"score":0.6958786249160767},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6082239151000977},{"id":"https://openalex.org/C58471807","wikidata":"https://www.wikidata.org/wiki/Q327120","display_name":"Receiver operating characteristic","level":2,"score":0.5975360870361328},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4397762417793274},{"id":"https://openalex.org/C93959086","wikidata":"https://www.wikidata.org/wiki/Q6888345","display_name":"Model selection","level":2,"score":0.4115833342075348},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4103219509124756},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4031546711921692}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1504/ijdmb.2016.10000565","is_oa":false,"landing_page_url":"https://doi.org/10.1504/ijdmb.2016.10000565","pdf_url":null,"source":{"id":"https://openalex.org/S35771696","display_name":"International Journal of Data Mining and Bioinformatics","issn_l":"1748-5673","issn":["1748-5673","1748-5681"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310317825","host_organization_name":"Inderscience Publishers","host_organization_lineage":["https://openalex.org/P4310317825"],"host_organization_lineage_names":["Inderscience Publishers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Data Mining and Bioinformatics","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.47999998927116394,"id":"https://metadata.un.org/sdg/17","display_name":"Partnerships for the goals"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2970784617","https://openalex.org/W2090763504","https://openalex.org/W2126639667","https://openalex.org/W4385649027","https://openalex.org/W2217963778","https://openalex.org/W148178222","https://openalex.org/W2129882004","https://openalex.org/W4303685026","https://openalex.org/W1980276147","https://openalex.org/W4381571012"],"abstract_inverted_index":{"The":[0],"era":[1],"of":[2,42,49,91,153],"protein":[3,50,158],"data":[4,141],"analysis":[5],"is":[6,21],"coming":[7],"with":[8],"more":[9,37],"accurate":[10],"quantification":[11],"experiments":[12],"such":[13],"as":[14],"the":[15,26,57,61,71,78,88,92,96,126,129,137,150,154],"multiple":[16],"reaction":[17],"monitoring":[18],"(MRM).":[19],"Protein":[20],"easier":[22],"to":[23,59,64,69,84,148],"obtain":[24],"than":[25],"other":[27],"genetic":[28],"variants":[29],"or":[30],"gene":[31],"expression":[32],"data,":[33,51],"which":[34,52],"makes":[35,53],"it":[36,54],"suitable":[38],"for":[39,56],"early":[40,89,155],"diagnosis":[41,90,156],"cancer.":[43,94],"Each":[44],"patient":[45],"has":[46],"unique":[47],"patterns":[48],"imperative":[55],"researcher":[58],"select":[60],"effective":[62,80],"markers":[63],"construct":[65],"a":[66,145],"consistent":[67],"model":[68],"predict":[70],"patients.":[72],"This":[73],"research":[74],"focuses":[75],"on":[76,106,136],"finding":[77],"most":[79],"variable":[81],"selection":[82,101,104,112,123],"method":[83,113,124,147],"be":[85],"applied":[86],"in":[87],"pancreatic":[93],"In":[95],"process,":[97],"we":[98,143],"compare":[99],"classical":[100],"methods":[102],"(stepwise":[103],"based":[105,111],"AIC,":[107],"BIC),":[108],"machine":[109,116],"learning":[110],"(support":[114],"vector":[115],"recursive":[117],"feature":[118],"selection;":[119],"SVM-REF),":[120],"and":[121,139],"stepwise":[122],"using":[125],"area":[127],"under":[128],"receiver":[130],"operating":[131],"characteristic":[132],"curve":[133],"(Step-AUC).":[134],"Based":[135],"simulation":[138],"real":[140],"analysis,":[142],"suggest":[144],"Step-AUC":[146],"maximise":[149],"prediction":[151],"performance":[152],"by":[157],"data.":[159]},"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
