{"id":"https://openalex.org/W2247809179","doi":"https://doi.org/10.14529/jsfi150302","title":"InfiniCloud: Leveraging the Global InfiniCortex Fabric and OpenStack Cloud for Borderless High Performance Computing of Genomic Data","display_name":"InfiniCloud: Leveraging the Global InfiniCortex Fabric and OpenStack Cloud for Borderless High Performance Computing of Genomic Data","publication_year":2015,"publication_date":"2015-09-01","ids":{"openalex":"https://openalex.org/W2247809179","doi":"https://doi.org/10.14529/jsfi150302","mag":"2247809179"},"language":"en","primary_location":{"id":"doi:10.14529/jsfi150302","is_oa":true,"landing_page_url":"https://doi.org/10.14529/jsfi150302","pdf_url":"https://superfri.org/index.php/superfri/article/download/76/135","source":{"id":"https://openalex.org/S4210177204","display_name":"Supercomputing Frontiers and Innovations","issn_l":"2313-8734","issn":["2313-8734","2409-6008"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310312680","host_organization_name":"Publishing center of the South Ural State University","host_organization_lineage":["https://openalex.org/P4310312680"],"host_organization_lineage_names":["Publishing center of the South Ural State University"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Supercomputing Frontiers and Innovations","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://superfri.org/index.php/superfri/article/download/76/135","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5039201788","display_name":"Kenneth Ban","orcid":"https://orcid.org/0000-0001-7165-8713"},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]},{"id":"https://openalex.org/I75573869","display_name":"Institute of Molecular and Cell Biology","ror":"https://ror.org/04xpsrn94","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I2801752549","https://openalex.org/I75573869"]},{"id":"https://openalex.org/I115228651","display_name":"Agency for Science, Technology and Research","ror":"https://ror.org/036wvzt09","country_code":"SG","type":"government","lineage":["https://openalex.org/I115228651"]}],"countries":["SG"],"is_corresponding":true,"raw_author_name":"Kenneth Hon Kim Ban","raw_affiliation_strings":["National University of Singapore, Singapore\r\nInstitute of Molecular and Cell Biology, A*STAR, Singapore"],"affiliations":[{"raw_affiliation_string":"National University of Singapore, Singapore\r\nInstitute of Molecular and Cell Biology, A*STAR, Singapore","institution_ids":["https://openalex.org/I75573869","https://openalex.org/I165932596","https://openalex.org/I115228651"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002299935","display_name":"Jakub Chrz\u0119szczyk","orcid":null},"institutions":[{"id":"https://openalex.org/I118347636","display_name":"Australian National University","ror":"https://ror.org/019wvm592","country_code":"AU","type":"education","lineage":["https://openalex.org/I118347636"]},{"id":"https://openalex.org/I4210141271","display_name":"National Computational Infrastructure","ror":"https://ror.org/04yx6dh41","country_code":"AU","type":"facility","lineage":["https://openalex.org/I4210141271"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Jakub Chrzeszczyk","raw_affiliation_strings":["National Computational Infrastructure, The Australian National University, Canberra"],"affiliations":[{"raw_affiliation_string":"National Computational Infrastructure, The Australian National University, Canberra","institution_ids":["https://openalex.org/I4210141271","https://openalex.org/I118347636"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112285267","display_name":"Andrew Howard","orcid":null},"institutions":[{"id":"https://openalex.org/I118347636","display_name":"Australian National University","ror":"https://ror.org/019wvm592","country_code":"AU","type":"education","lineage":["https://openalex.org/I118347636"]},{"id":"https://openalex.org/I4210141271","display_name":"National Computational Infrastructure","ror":"https://ror.org/04yx6dh41","country_code":"AU","type":"facility","lineage":["https://openalex.org/I4210141271"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Andrew Howard","raw_affiliation_strings":["National Computational Infrastructure, The Australian National University, Canberra"],"affiliations":[{"raw_affiliation_string":"National Computational Infrastructure, The Australian National University, Canberra","institution_ids":["https://openalex.org/I4210141271","https://openalex.org/I118347636"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100459321","display_name":"Dongyang Li","orcid":"https://orcid.org/0000-0002-5603-3608"},"institutions":[{"id":"https://openalex.org/I4210141271","display_name":"National Computational Infrastructure","ror":"https://ror.org/04yx6dh41","country_code":"AU","type":"facility","lineage":["https://openalex.org/I4210141271"]},{"id":"https://openalex.org/I118347636","display_name":"Australian National University","ror":"https://ror.org/019wvm592","country_code":"AU","type":"education","lineage":["https://openalex.org/I118347636"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Dongyang Li","raw_affiliation_strings":["National Computational Infrastructure, The Australian National University, Canberra"],"affiliations":[{"raw_affiliation_string":"National Computational Infrastructure, The Australian National University, Canberra","institution_ids":["https://openalex.org/I4210141271","https://openalex.org/I118347636"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5108317608","display_name":"Tin Wee Tan","orcid":"https://orcid.org/0009-0008-7829-3647"},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]},{"id":"https://openalex.org/I115228651","display_name":"Agency for Science, Technology and Research","ror":"https://ror.org/036wvzt09","country_code":"SG","type":"government","lineage":["https://openalex.org/I115228651"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Tin Wee Tan","raw_affiliation_strings":["1) National University of Singapore, Singapore\r\n2) A*STAR Computational Resource Centre (A*CRC), A*STAR, Singapore"],"affiliations":[{"raw_affiliation_string":"1) National University of Singapore, Singapore\r\n2) A*STAR Computational Resource Centre (A*CRC), A*STAR, Singapore","institution_ids":["https://openalex.org/I165932596","https://openalex.org/I115228651"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5039201788"],"corresponding_institution_ids":["https://openalex.org/I115228651","https://openalex.org/I165932596","https://openalex.org/I75573869"],"apc_list":null,"apc_paid":null,"fwci":0.4376,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.65812306,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"2","issue":"3","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9837999939918518,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9837999939918518,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9811000227928162,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9309999942779541,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/infiniband","display_name":"InfiniBand","score":0.9102694392204285},{"id":"https://openalex.org/keywords/cloud-computing","display_name":"Cloud computing","score":0.839468240737915},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7023149728775024},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.6963441967964172},{"id":"https://openalex.org/keywords/supercomputer","display_name":"Supercomputer","score":0.6897753477096558},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.5495284795761108},{"id":"https://openalex.org/keywords/architecture","display_name":"Architecture","score":0.48493555188179016},{"id":"https://openalex.org/keywords/big-data","display_name":"Big data","score":0.4491285979747772},{"id":"https://openalex.org/keywords/computer-architecture","display_name":"Computer architecture","score":0.35150498151779175},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.27962732315063477}],"concepts":[{"id":"https://openalex.org/C2781030343","wikidata":"https://www.wikidata.org/wiki/Q922437","display_name":"InfiniBand","level":2,"score":0.9102694392204285},{"id":"https://openalex.org/C79974875","wikidata":"https://www.wikidata.org/wiki/Q483639","display_name":"Cloud computing","level":2,"score":0.839468240737915},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7023149728775024},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.6963441967964172},{"id":"https://openalex.org/C83283714","wikidata":"https://www.wikidata.org/wiki/Q121117","display_name":"Supercomputer","level":2,"score":0.6897753477096558},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.5495284795761108},{"id":"https://openalex.org/C123657996","wikidata":"https://www.wikidata.org/wiki/Q12271","display_name":"Architecture","level":2,"score":0.48493555188179016},{"id":"https://openalex.org/C75684735","wikidata":"https://www.wikidata.org/wiki/Q858810","display_name":"Big data","level":2,"score":0.4491285979747772},{"id":"https://openalex.org/C118524514","wikidata":"https://www.wikidata.org/wiki/Q173212","display_name":"Computer architecture","level":1,"score":0.35150498151779175},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.27962732315063477},{"id":"https://openalex.org/C153349607","wikidata":"https://www.wikidata.org/wiki/Q36649","display_name":"Visual arts","level":1,"score":0.0},{"id":"https://openalex.org/C142362112","wikidata":"https://www.wikidata.org/wiki/Q735","display_name":"Art","level":0,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.14529/jsfi150302","is_oa":true,"landing_page_url":"https://doi.org/10.14529/jsfi150302","pdf_url":"https://superfri.org/index.php/superfri/article/download/76/135","source":{"id":"https://openalex.org/S4210177204","display_name":"Supercomputing Frontiers and Innovations","issn_l":"2313-8734","issn":["2313-8734","2409-6008"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310312680","host_organization_name":"Publishing center of the South Ural State University","host_organization_lineage":["https://openalex.org/P4310312680"],"host_organization_lineage_names":["Publishing center of the South Ural State University"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Supercomputing Frontiers and Innovations","raw_type":"journal-article"},{"id":"pmh:oai:scholarbank.nus.edu.sg:10635/183887","is_oa":true,"landing_page_url":"https://scholarbank.nus.edu.sg/handle/10635/183887","pdf_url":null,"source":{"id":"https://openalex.org/S7407052290","display_name":"National University of Singapore","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Unpaywall 20201031","raw_type":"Article"}],"best_oa_location":{"id":"doi:10.14529/jsfi150302","is_oa":true,"landing_page_url":"https://doi.org/10.14529/jsfi150302","pdf_url":"https://superfri.org/index.php/superfri/article/download/76/135","source":{"id":"https://openalex.org/S4210177204","display_name":"Supercomputing Frontiers and Innovations","issn_l":"2313-8734","issn":["2313-8734","2409-6008"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310312680","host_organization_name":"Publishing center of the South Ural State University","host_organization_lineage":["https://openalex.org/P4310312680"],"host_organization_lineage_names":["Publishing center of the South Ural State University"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Supercomputing Frontiers and Innovations","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9","score":0.4099999964237213}],"awards":[],"funders":[{"id":"https://openalex.org/F4320312169","display_name":"National Computational Infrastructure","ror":"https://ror.org/04yx6dh41"},{"id":"https://openalex.org/F4320315885","display_name":"Australian Government","ror":"https://ror.org/0314h5y94"},{"id":"https://openalex.org/F4320337351","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2247809179.pdf","grobid_xml":"https://content.openalex.org/works/W2247809179.grobid-xml"},"referenced_works_count":6,"referenced_works":["https://openalex.org/W2058087601","https://openalex.org/W2065547432","https://openalex.org/W2072341511","https://openalex.org/W2149477213","https://openalex.org/W2158694851","https://openalex.org/W2292601328"],"related_works":["https://openalex.org/W2406331183","https://openalex.org/W2363988059","https://openalex.org/W2792231649","https://openalex.org/W2053215237","https://openalex.org/W1939358748","https://openalex.org/W1995426833","https://openalex.org/W2613555492","https://openalex.org/W3150273738","https://openalex.org/W1597650818","https://openalex.org/W4287109558"],"abstract_inverted_index":{"At":[0],"the":[1,37,48],"Supercomputing":[2],"Frontiers":[3],"Conference":[4],"in":[5,7,65,73],"Singapore":[6],"2015,":[8],"A*CRC":[9],"(Singapore)":[10],"and":[11,52,83],"NCI":[12],"(Canberra,":[13],"Australia)":[14],"presented":[15],"InfiniCloud,":[16],"a":[17,43],"geographically":[18,66],"distributed,":[19],"high":[20,59,84],"performance":[21,60],"InfiniBand":[22],"HPC":[23],"Cloud":[24],"which":[25],"aims":[26],"to":[27],"enable":[28],"borderless":[29],"processing":[30],"of":[31,36,47,50,62,71,81,87],"genomic":[32,63],"data":[33,64,88],"as":[34],"part":[35],"InfiniCortex":[38],"project.":[39],"This":[40],"paper":[41],"provides":[42],"high-level":[44],"technical":[45],"overview":[46],"architecture":[49],"InfiniCloud":[51],"how":[53],"it":[54],"can":[55],"be":[56],"used":[57],"for":[58],"computation":[61],"distant":[67],"sites":[68],"by":[69],"encapsulation":[70],"workflows/applications":[72],"Virtual":[74],"Machines":[75],"(VM)":[76],"coupled":[77],"with":[78],"on-the-fly":[79],"configuration":[80],"clusters":[82],"speed":[85],"transfer":[86],"via":[89],"long":[90],"range":[91],"InfiniBand.":[92]},"counts_by_year":[{"year":2020,"cited_by_count":1},{"year":2016,"cited_by_count":3}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2016-06-24T00:00:00"}
