{"id":"https://openalex.org/W3094878445","doi":"https://doi.org/10.1371/journal.pcbi.1008293","title":"Quantitative comparison between sub-millisecond time resolution single-molecule FRET measurements and 10-second molecular simulations of a biosensor protein","display_name":"Quantitative comparison between sub-millisecond time resolution single-molecule FRET measurements and 10-second molecular simulations of a biosensor protein","publication_year":2020,"publication_date":"2020-11-05","ids":{"openalex":"https://openalex.org/W3094878445","doi":"https://doi.org/10.1371/journal.pcbi.1008293","mag":"3094878445","pmid":"https://pubmed.ncbi.nlm.nih.gov/33151943"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1008293","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1008293","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1008293&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1008293&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5007932597","display_name":"Dylan Girodat","orcid":"https://orcid.org/0000-0001-5753-8109"},"institutions":[{"id":"https://openalex.org/I1343871089","display_name":"Los Alamos National Laboratory","ror":"https://ror.org/01e41cf67","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I1343871089","https://openalex.org/I198811213","https://openalex.org/I4210120050"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Dylan Girodat","raw_affiliation_strings":["Theoretical Biology and Biophysics, Theoretical Division, Los Alamos National Laboratory, Los Alamos, New Mexico, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Theoretical Biology and Biophysics, Theoretical Division, Los Alamos National Laboratory, Los Alamos, New Mexico, United States of America","institution_ids":["https://openalex.org/I1343871089"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080118720","display_name":"Avik Kumar Pati","orcid":"https://orcid.org/0000-0001-5539-7031"},"institutions":[{"id":"https://openalex.org/I1313298211","display_name":"St. Jude Children's Research Hospital","ror":"https://ror.org/02r3e0967","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1313298211","https://openalex.org/I2802152183"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Avik K. Pati","raw_affiliation_strings":["Department of Structural Biology, St. Jude Children's Research Hospital, Memphis, Tennessee, United States of America"],"raw_orcid":"https://orcid.org/0000-0001-5539-7031","affiliations":[{"raw_affiliation_string":"Department of Structural Biology, St. Jude Children's Research Hospital, Memphis, Tennessee, United States of America","institution_ids":["https://openalex.org/I1313298211"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004524719","display_name":"Daniel S. Terry","orcid":"https://orcid.org/0000-0001-9021-0084"},"institutions":[{"id":"https://openalex.org/I1313298211","display_name":"St. Jude Children's Research Hospital","ror":"https://ror.org/02r3e0967","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1313298211","https://openalex.org/I2802152183"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Daniel S. Terry","raw_affiliation_strings":["Department of Structural Biology, St. Jude Children's Research Hospital, Memphis, Tennessee, United States of America"],"raw_orcid":"https://orcid.org/0000-0001-9021-0084","affiliations":[{"raw_affiliation_string":"Department of Structural Biology, St. Jude Children's Research Hospital, Memphis, Tennessee, United States of America","institution_ids":["https://openalex.org/I1313298211"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021553016","display_name":"Scott C. Blanchard","orcid":"https://orcid.org/0000-0003-2717-9365"},"institutions":[{"id":"https://openalex.org/I1313298211","display_name":"St. Jude Children's Research Hospital","ror":"https://ror.org/02r3e0967","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1313298211","https://openalex.org/I2802152183"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Scott C. Blanchard","raw_affiliation_strings":["Department of Structural Biology, St. Jude Children's Research Hospital, Memphis, Tennessee, United States of America"],"raw_orcid":"https://orcid.org/0000-0003-2717-9365","affiliations":[{"raw_affiliation_string":"Department of Structural Biology, St. Jude Children's Research Hospital, Memphis, Tennessee, United States of America","institution_ids":["https://openalex.org/I1313298211"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5024203760","display_name":"Karissa Y. Sanbonmatsu","orcid":"https://orcid.org/0000-0002-7965-7392"},"institutions":[{"id":"https://openalex.org/I1343871089","display_name":"Los Alamos National Laboratory","ror":"https://ror.org/01e41cf67","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I1343871089","https://openalex.org/I198811213","https://openalex.org/I4210120050"]},{"id":"https://openalex.org/I4210110743","display_name":"New Mexico Consortium","ror":"https://ror.org/01qnpp968","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210110743"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Karissa Y. Sanbonmatsu","raw_affiliation_strings":["New Mexico Consortium, Los Alamos, New Mexico, United States of America","Theoretical Biology and Biophysics, Theoretical Division, Los Alamos National Laboratory, Los Alamos, New Mexico, United States of America"],"raw_orcid":"https://orcid.org/0000-0002-7965-7392","affiliations":[{"raw_affiliation_string":"New Mexico Consortium, Los Alamos, New Mexico, United States of America","institution_ids":["https://openalex.org/I4210110743"]},{"raw_affiliation_string":"Theoretical Biology and Biophysics, Theoretical Division, Los Alamos National Laboratory, Los Alamos, New Mexico, United States of America","institution_ids":["https://openalex.org/I1343871089"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5021553016","https://openalex.org/A5024203760"],"corresponding_institution_ids":["https://openalex.org/I1313298211","https://openalex.org/I1343871089","https://openalex.org/I4210110743"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":2.7152,"has_fulltext":true,"cited_by_count":24,"citation_normalized_percentile":{"value":0.90780853,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":95,"max":99},"biblio":{"volume":"16","issue":"11","first_page":"e1008293","last_page":"e1008293"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10540","display_name":"Advanced Fluorescence Microscopy Techniques","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10540","display_name":"Advanced Fluorescence Microscopy Techniques","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10923","display_name":"Force Microscopy Techniques and Applications","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/3107","display_name":"Atomic and Molecular Physics, and Optics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10913","display_name":"Molecular Junctions and Nanostructures","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2208","display_name":"Electrical and Electronic Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/millisecond","display_name":"Millisecond","score":0.885748028755188},{"id":"https://openalex.org/keywords/f\u00f6rster-resonance-energy-transfer","display_name":"F\u00f6rster resonance energy transfer","score":0.6947073340415955},{"id":"https://openalex.org/keywords/biosensor","display_name":"Biosensor","score":0.6192619800567627},{"id":"https://openalex.org/keywords/resolution","display_name":"Resolution (logic)","score":0.5473778247833252},{"id":"https://openalex.org/keywords/molecule","display_name":"Molecule","score":0.48523592948913574},{"id":"https://openalex.org/keywords/materials-science","display_name":"Materials science","score":0.4081737995147705},{"id":"https://openalex.org/keywords/nanotechnology","display_name":"Nanotechnology","score":0.3884372413158417},{"id":"https://openalex.org/keywords/analytical-chemistry","display_name":"Analytical Chemistry (journal)","score":0.3585381805896759},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.35139042139053345},{"id":"https://openalex.org/keywords/fluorescence","display_name":"Fluorescence","score":0.22395268082618713},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.18796461820602417},{"id":"https://openalex.org/keywords/optics","display_name":"Optics","score":0.15175381302833557},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.14011985063552856},{"id":"https://openalex.org/keywords/chromatography","display_name":"Chromatography","score":0.10566431283950806}],"concepts":[{"id":"https://openalex.org/C60327585","wikidata":"https://www.wikidata.org/wiki/Q723733","display_name":"Millisecond","level":2,"score":0.885748028755188},{"id":"https://openalex.org/C96305047","wikidata":"https://www.wikidata.org/wiki/Q367473","display_name":"F\u00f6rster resonance energy transfer","level":3,"score":0.6947073340415955},{"id":"https://openalex.org/C160756335","wikidata":"https://www.wikidata.org/wiki/Q669391","display_name":"Biosensor","level":2,"score":0.6192619800567627},{"id":"https://openalex.org/C138268822","wikidata":"https://www.wikidata.org/wiki/Q1051925","display_name":"Resolution (logic)","level":2,"score":0.5473778247833252},{"id":"https://openalex.org/C32909587","wikidata":"https://www.wikidata.org/wiki/Q11369","display_name":"Molecule","level":2,"score":0.48523592948913574},{"id":"https://openalex.org/C192562407","wikidata":"https://www.wikidata.org/wiki/Q228736","display_name":"Materials science","level":0,"score":0.4081737995147705},{"id":"https://openalex.org/C171250308","wikidata":"https://www.wikidata.org/wiki/Q11468","display_name":"Nanotechnology","level":1,"score":0.3884372413158417},{"id":"https://openalex.org/C113196181","wikidata":"https://www.wikidata.org/wiki/Q485223","display_name":"Analytical Chemistry (journal)","level":2,"score":0.3585381805896759},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.35139042139053345},{"id":"https://openalex.org/C91881484","wikidata":"https://www.wikidata.org/wiki/Q191807","display_name":"Fluorescence","level":2,"score":0.22395268082618713},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.18796461820602417},{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.15175381302833557},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.14011985063552856},{"id":"https://openalex.org/C43617362","wikidata":"https://www.wikidata.org/wiki/Q170050","display_name":"Chromatography","level":1,"score":0.10566431283950806},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.0},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0},{"id":"https://openalex.org/C1276947","wikidata":"https://www.wikidata.org/wiki/Q333","display_name":"Astronomy","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D013996","descriptor_name":"Time and Motion Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013996","descriptor_name":"Time and Motion Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013996","descriptor_name":"Time and Motion Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015374","descriptor_name":"Biosensing Techniques","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015374","descriptor_name":"Biosensing Techniques","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015374","descriptor_name":"Biosensing Techniques","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D031541","descriptor_name":"Fluorescence Resonance Energy Transfer","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D031541","descriptor_name":"Fluorescence Resonance Energy Transfer","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D031541","descriptor_name":"Fluorescence Resonance Energy Transfer","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1371/journal.pcbi.1008293","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1008293","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1008293&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:33151943","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33151943","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:RePEc:plo:pcbi00:1008293","is_oa":false,"landing_page_url":"https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1008293","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},{"id":"pmh:oai:doaj.org/article:db0e0fee946d461b8734df83c9cbea39","is_oa":true,"landing_page_url":"https://doaj.org/article/db0e0fee946d461b8734df83c9cbea39","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 16, Iss 11, p e1008293 (2020)","raw_type":"article"},{"id":"pmh:oai:osti.gov:1815767","is_oa":true,"landing_page_url":"https://www.osti.gov/biblio/1815767","pdf_url":null,"source":{"id":"https://openalex.org/S4306402487","display_name":"OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I139351228","host_organization_name":"Office of Scientific and Technical Information","host_organization_lineage":["https://openalex.org/I139351228"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:7643941","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7643941","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1008293","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1008293","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1008293&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/7","display_name":"Affordable and clean energy","score":0.800000011920929}],"awards":[{"id":"https://openalex.org/G1332942343","display_name":null,"funder_award_id":"R01-GM079238-13","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G1390803635","display_name":null,"funder_award_id":"GM079238","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G2664342524","display_name":null,"funder_award_id":"20200222DR","funder_id":"https://openalex.org/F4320337547","funder_display_name":"Laboratory Directed Research and Development"},{"id":"https://openalex.org/G3926452567","display_name":null,"funder_award_id":"GM072686","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G3934023954","display_name":null,"funder_award_id":"R01-GM079238","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G4769796230","display_name":null,"funder_award_id":"GM098859","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G570117449","display_name":null,"funder_award_id":"GM079238","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G648649150","display_name":null,"funder_award_id":"R01-GM072686","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G6858832330","display_name":null,"funder_award_id":"GM098859","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G911925099","display_name":null,"funder_award_id":"R01-GM098859-07","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320306084","display_name":"U.S. Department of Energy","ror":"https://ror.org/01bj3aw27"},{"id":"https://openalex.org/F4320310040","display_name":"St. Jude Children's Research Hospital","ror":"https://ror.org/02r3e0967"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"},{"id":"https://openalex.org/F4320337547","display_name":"Laboratory Directed Research and Development","ror":"https://ror.org/01e41cf67"},{"id":"https://openalex.org/F4320338304","display_name":"Los Alamos National Laboratory","ror":"https://ror.org/01e41cf67"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3094878445.pdf","grobid_xml":"https://content.openalex.org/works/W3094878445.grobid-xml"},"referenced_works_count":87,"referenced_works":["https://openalex.org/W46148605","https://openalex.org/W1487983025","https://openalex.org/W1535997186","https://openalex.org/W1966078827","https://openalex.org/W1968233513","https://openalex.org/W1973382479","https://openalex.org/W1979863594","https://openalex.org/W1996221252","https://openalex.org/W2015688756","https://openalex.org/W2018137678","https://openalex.org/W2024361360","https://openalex.org/W2027109368","https://openalex.org/W2028046413","https://openalex.org/W2029694443","https://openalex.org/W2039688006","https://openalex.org/W2044882887","https://openalex.org/W2045938444","https://openalex.org/W2056245019","https://openalex.org/W2058493522","https://openalex.org/W2061674188","https://openalex.org/W2064274102","https://openalex.org/W2066375534","https://openalex.org/W2067204014","https://openalex.org/W2071075252","https://openalex.org/W2075460992","https://openalex.org/W2079199763","https://openalex.org/W2084513601","https://openalex.org/W2114323152","https://openalex.org/W2124081058","https://openalex.org/W2132677630","https://openalex.org/W2141184730","https://openalex.org/W2143981217","https://openalex.org/W2145844380","https://openalex.org/W2147993766","https://openalex.org/W2148284063","https://openalex.org/W2150614072","https://openalex.org/W2150662472","https://openalex.org/W2153066330","https://openalex.org/W2162355408","https://openalex.org/W2275043758","https://openalex.org/W2295059836","https://openalex.org/W2298685534","https://openalex.org/W2333562923","https://openalex.org/W2335891899","https://openalex.org/W2396911249","https://openalex.org/W2408706162","https://openalex.org/W2412542910","https://openalex.org/W2429021827","https://openalex.org/W2517371615","https://openalex.org/W2563269113","https://openalex.org/W2567252192","https://openalex.org/W2594452526","https://openalex.org/W2612911266","https://openalex.org/W2624652951","https://openalex.org/W2744067308","https://openalex.org/W2760872916","https://openalex.org/W2762899632","https://openalex.org/W2767197262","https://openalex.org/W2786992197","https://openalex.org/W2787436621","https://openalex.org/W2790690975","https://openalex.org/W2793069345","https://openalex.org/W2794222182","https://openalex.org/W2801312853","https://openalex.org/W2802513963","https://openalex.org/W2803634377","https://openalex.org/W2887996311","https://openalex.org/W2889804520","https://openalex.org/W2892113269","https://openalex.org/W2897912389","https://openalex.org/W2899627795","https://openalex.org/W2922548169","https://openalex.org/W2949930635","https://openalex.org/W2950020601","https://openalex.org/W2950763631","https://openalex.org/W2952711759","https://openalex.org/W2962841008","https://openalex.org/W2970299821","https://openalex.org/W2971835376","https://openalex.org/W2986968588","https://openalex.org/W3000381512","https://openalex.org/W3003188582","https://openalex.org/W3005144567","https://openalex.org/W3005590688","https://openalex.org/W3007171332","https://openalex.org/W3022554208","https://openalex.org/W3086908661"],"related_works":["https://openalex.org/W2146292829","https://openalex.org/W2032124327","https://openalex.org/W1547421146","https://openalex.org/W2914628622","https://openalex.org/W2413412399","https://openalex.org/W1964857975","https://openalex.org/W4394915476","https://openalex.org/W3005327985","https://openalex.org/W2806593264","https://openalex.org/W4310992485"],"abstract_inverted_index":{"Molecular":[0],"Dynamics":[1],"(MD)":[2],"simulations":[3,35,88,154,194],"seek":[4],"to":[5,46,62,195,220,233],"provide":[6,63,161],"atomic-level":[7],"insights":[8],"into":[9],"conformationally":[10],"dynamic":[11],"biological":[12],"systems":[13],"at":[14,89,111,169],"experimentally":[15],"relevant":[16],"time":[17,31,38,90,137],"resolutions,":[18],"such":[19,57],"as":[20,244,246],"those":[21,148,239,247],"afforded":[22],"by":[23,150],"single-molecule":[24,41,96],"fluorescence":[25],"measurements.":[26],"However,":[27],"limitations":[28],"in":[29,94],"the":[30,37,60,77,80,105,136,142,157,177,192,197,226],"scales":[32,91],"of":[33,40,79,104,130,139,167,172,199,228],"MD":[34,87,153,193],"and":[36,67,147,160,176,182,206],"resolution":[39],"measurements":[42,103,159],"have":[43],"challenged":[44],"efforts":[45],"obtain":[47],"overlapping":[48,92],"temporal":[49],"regimes":[50],"required":[51],"for":[52,126,225],"close":[53],"quantitative":[54],"comparisons.":[55],"Achieving":[56],"overlap":[58],"has":[59],"potential":[61],"novel":[64],"theories,":[65],"hypotheses,":[66],"interpretations":[68],"that":[69,75],"can":[70,216],"inform":[71,196],"idealized":[72],"experimental":[73],"designs":[74],"maximize":[76],"detection":[78],"desired":[81],"reaction":[82],"coordinate.":[83],"Here,":[84],"we":[85,214],"report":[86],"with":[93,156,240],"vitro":[95],"F\u00f6rster":[97,203],"(fluorescence)":[98],"resonance":[99],"energy":[100],"transfer":[101],"(smFRET)":[102],"amino":[106],"acid":[107],"binding":[108],"protein":[109,234],"LIV-BPSS":[110,131,175,187],"sub-millisecond":[112],"resolution.":[113],"Computationally":[114],"efficient":[115],"all-atom":[116],"structure-based":[117],"simulations,":[118,123],"calibrated":[119],"against":[120],"explicit":[121],"solvent":[122],"were":[124],"employed":[125],"sampling":[127],"multiple":[128],"cycles":[129],"clamshell-like":[132],"conformational":[133,184,242],"changes":[134,185],"on":[135,164,174],"scale":[138],"seconds,":[140],"examining":[141],"relationship":[143],"between":[144,179,186],"these":[145],"events":[146],"observed":[149],"smFRET.":[151,250],"The":[152,212],"agree":[155],"smFRET":[158,200],"valuable":[162],"information":[163],"local":[165],"dynamics":[166],"fluorophores":[168],"their":[170],"sites":[171],"attachment":[173],"correlations":[178],"fluorophore":[180,207],"motions":[181],"large-scale":[183],"domains.":[188],"We":[189],"further":[190],"utilize":[191],"interpretation":[198,227],"data,":[201],"including":[202,238],"radius":[204],"(R0)":[205],"orientation":[208],"factor":[209],"(\u03ba2)":[210],"determinations.":[211],"approach":[213],"describe":[215],"be":[217],"readily":[218],"extended":[219],"distinct":[221],"biochemical":[222],"systems,":[223],"allowing":[224],"any":[229],"FRET":[230],"system":[231],"conjugated":[232],"or":[235],"ribonucleoprotein":[236],"complexes,":[237],"more":[241],"processes,":[243],"well":[245],"implementing":[248],"multi-color":[249]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":3}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}
