{"id":"https://openalex.org/W4404987875","doi":"https://doi.org/10.1371/journal.pcbi.1013926","title":"Plastic Arbor: A modern simulation framework for synaptic plasticity\u2014From single synapses to networks of morphological neurons","display_name":"Plastic Arbor: A modern simulation framework for synaptic plasticity\u2014From single synapses to networks of morphological neurons","publication_year":2026,"publication_date":"2026-02-12","ids":{"openalex":"https://openalex.org/W4404987875","doi":"https://doi.org/10.1371/journal.pcbi.1013926","pmid":"https://pubmed.ncbi.nlm.nih.gov/41678575"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1013926","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1013926","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"preprint","indexed_in":["arxiv","crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1371/journal.pcbi.1013926","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5051573698","display_name":"Jannik Luboeinski","orcid":"https://orcid.org/0000-0002-1959-5644"},"institutions":[{"id":"https://openalex.org/I4210116730","display_name":"Universit\u00e4tsmedizin G\u00f6ttingen","ror":"https://ror.org/021ft0n22","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I4210116730"]},{"id":"https://openalex.org/I74656192","display_name":"University of G\u00f6ttingen","ror":"https://ror.org/01y9bpm73","country_code":"DE","type":"education","lineage":["https://openalex.org/I74656192"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Jannik Luboeinski","raw_affiliation_strings":["Campus Institute Data Science (CIDAS), G\u00f6ttingen, Germany","Department for Neuro- and Sensory Physiology, University Medical Center G\u00f6ttingen, G\u00f6ttingen, Germany","III. Institute of Physics-Biophysics, University of G\u00f6ttingen, G\u00f6ttingen, Germany"],"raw_orcid":"https://orcid.org/0000-0002-1959-5644","affiliations":[{"raw_affiliation_string":"Campus Institute Data Science (CIDAS), G\u00f6ttingen, Germany","institution_ids":[]},{"raw_affiliation_string":"Department for Neuro- and Sensory Physiology, University Medical Center G\u00f6ttingen, G\u00f6ttingen, Germany","institution_ids":["https://openalex.org/I74656192","https://openalex.org/I4210116730"]},{"raw_affiliation_string":"III. Institute of Physics-Biophysics, University of G\u00f6ttingen, G\u00f6ttingen, Germany","institution_ids":["https://openalex.org/I74656192"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5104002520","display_name":"Sebastian Schmitt","orcid":null},"institutions":[{"id":"https://openalex.org/I4210116730","display_name":"Universit\u00e4tsmedizin G\u00f6ttingen","ror":"https://ror.org/021ft0n22","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I4210116730"]},{"id":"https://openalex.org/I74656192","display_name":"University of G\u00f6ttingen","ror":"https://ror.org/01y9bpm73","country_code":"DE","type":"education","lineage":["https://openalex.org/I74656192"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Sebastian Schmitt","raw_affiliation_strings":["Department for Neuro- and Sensory Physiology, University Medical Center G\u00f6ttingen, G\u00f6ttingen, Germany","III. Institute of Physics-Biophysics, University of G\u00f6ttingen, G\u00f6ttingen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department for Neuro- and Sensory Physiology, University Medical Center G\u00f6ttingen, G\u00f6ttingen, Germany","institution_ids":["https://openalex.org/I74656192","https://openalex.org/I4210116730"]},{"raw_affiliation_string":"III. Institute of Physics-Biophysics, University of G\u00f6ttingen, G\u00f6ttingen, Germany","institution_ids":["https://openalex.org/I74656192"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Shirin Shafiee","orcid":null},"institutions":[{"id":"https://openalex.org/I4210116730","display_name":"Universit\u00e4tsmedizin G\u00f6ttingen","ror":"https://ror.org/021ft0n22","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I4210116730"]},{"id":"https://openalex.org/I74656192","display_name":"University of G\u00f6ttingen","ror":"https://ror.org/01y9bpm73","country_code":"DE","type":"education","lineage":["https://openalex.org/I74656192"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Shirin Shafiee","raw_affiliation_strings":["Department for Neuro- and Sensory Physiology, University Medical Center G\u00f6ttingen, G\u00f6ttingen, Germany","III. Institute of Physics-Biophysics, University of G\u00f6ttingen, G\u00f6ttingen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department for Neuro- and Sensory Physiology, University Medical Center G\u00f6ttingen, G\u00f6ttingen, Germany","institution_ids":["https://openalex.org/I74656192","https://openalex.org/I4210116730"]},{"raw_affiliation_string":"III. Institute of Physics-Biophysics, University of G\u00f6ttingen, G\u00f6ttingen, Germany","institution_ids":["https://openalex.org/I74656192"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036437857","display_name":"Thorsten Hater","orcid":null},"institutions":[{"id":"https://openalex.org/I171892758","display_name":"Forschungszentrum J\u00fclich","ror":"https://ror.org/02nv7yv05","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I171892758"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Thorsten Hater","raw_affiliation_strings":["J\u00fclich Supercomputing Centre, Forschungszentrum J\u00fclich, J\u00fclich, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"J\u00fclich Supercomputing Centre, Forschungszentrum J\u00fclich, J\u00fclich, Germany","institution_ids":["https://openalex.org/I171892758"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065024012","display_name":"Fabian B\u00f6sch","orcid":null},"institutions":[{"id":"https://openalex.org/I4210094294","display_name":"Supercomputing Systems (Switzerland)","ror":"https://ror.org/00nmpgc29","country_code":"CH","type":"company","lineage":["https://openalex.org/I4210094294"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Fabian B\u00f6sch","raw_affiliation_strings":["Swiss National Supercomputing Centre, ETH Z\u00fcrich, Z\u00fcrich, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Swiss National Supercomputing Centre, ETH Z\u00fcrich, Z\u00fcrich, Switzerland","institution_ids":["https://openalex.org/I4210094294"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5084861593","display_name":"Christian Tetzlaff","orcid":"https://orcid.org/0000-0003-1901-6232"},"institutions":[{"id":"https://openalex.org/I4210116730","display_name":"Universit\u00e4tsmedizin G\u00f6ttingen","ror":"https://ror.org/021ft0n22","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I4210116730"]},{"id":"https://openalex.org/I74656192","display_name":"University of G\u00f6ttingen","ror":"https://ror.org/01y9bpm73","country_code":"DE","type":"education","lineage":["https://openalex.org/I74656192"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Christian Tetzlaff","raw_affiliation_strings":["Campus Institute Data Science (CIDAS), G\u00f6ttingen, Germany","Department for Neuro- and Sensory Physiology, University Medical Center G\u00f6ttingen, G\u00f6ttingen, Germany","III. Institute of Physics-Biophysics, University of G\u00f6ttingen, G\u00f6ttingen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Campus Institute Data Science (CIDAS), G\u00f6ttingen, Germany","institution_ids":[]},{"raw_affiliation_string":"Department for Neuro- and Sensory Physiology, University Medical Center G\u00f6ttingen, G\u00f6ttingen, Germany","institution_ids":["https://openalex.org/I74656192","https://openalex.org/I4210116730"]},{"raw_affiliation_string":"III. Institute of Physics-Biophysics, University of G\u00f6ttingen, G\u00f6ttingen, Germany","institution_ids":["https://openalex.org/I74656192"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5051573698"],"corresponding_institution_ids":["https://openalex.org/I4210116730","https://openalex.org/I74656192"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":17.4596,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.96453022,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":95,"max":98},"biblio":{"volume":"22","issue":"2","first_page":"e1013926","last_page":"e1013926"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10581","display_name":"Neural dynamics and brain function","score":0.8377000093460083,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10581","display_name":"Neural dynamics and brain function","score":0.8377000093460083,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10502","display_name":"Advanced Memory and Neural Computing","score":0.8101000189781189,"subfield":{"id":"https://openalex.org/subfields/2208","display_name":"Electrical and Electronic Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/unicode","display_name":"Unicode","score":0.6210495233535767},{"id":"https://openalex.org/keywords/synaptic-plasticity","display_name":"Synaptic plasticity","score":0.5721668004989624},{"id":"https://openalex.org/keywords/plasticity","display_name":"Plasticity","score":0.5385820269584656},{"id":"https://openalex.org/keywords/neuroscience","display_name":"Neuroscience","score":0.5240093469619751},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.43802350759506226},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.26059800386428833},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.18467530608177185},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.12405747175216675}],"concepts":[{"id":"https://openalex.org/C500551929","wikidata":"https://www.wikidata.org/wiki/Q8819","display_name":"Unicode","level":2,"score":0.6210495233535767},{"id":"https://openalex.org/C98229152","wikidata":"https://www.wikidata.org/wiki/Q1551556","display_name":"Synaptic plasticity","level":3,"score":0.5721668004989624},{"id":"https://openalex.org/C79186407","wikidata":"https://www.wikidata.org/wiki/Q472074","display_name":"Plasticity","level":2,"score":0.5385820269584656},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.5240093469619751},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.43802350759506226},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.26059800386428833},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.18467530608177185},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.12405747175216675},{"id":"https://openalex.org/C97355855","wikidata":"https://www.wikidata.org/wiki/Q11473","display_name":"Thermodynamics","level":1,"score":0.0},{"id":"https://openalex.org/C170493617","wikidata":"https://www.wikidata.org/wiki/Q208467","display_name":"Receptor","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003712","descriptor_name":"Dendrites","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D003712","descriptor_name":"Dendrites","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D003712","descriptor_name":"Dendrites","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008959","descriptor_name":"Models, Neurological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008959","descriptor_name":"Models, Neurological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008959","descriptor_name":"Models, Neurological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009415","descriptor_name":"Nerve Net","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D009415","descriptor_name":"Nerve Net","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D009415","descriptor_name":"Nerve Net","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D009473","descriptor_name":"Neuronal Plasticity","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D009473","descriptor_name":"Neuronal Plasticity","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D009473","descriptor_name":"Neuronal Plasticity","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013569","descriptor_name":"Synapses","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D013569","descriptor_name":"Synapses","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D013569","descriptor_name":"Synapses","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":12,"locations":[{"id":"doi:10.1371/journal.pcbi.1013926","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1013926","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:41678575","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/41678575","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:publications.goettingen-research-online.de:2/149923","is_oa":true,"landing_page_url":"https://resolver.sub.uni-goettingen.de/purl?gro-2/149923","pdf_url":null,"source":{"id":"https://openalex.org/S4306401634","display_name":"GoeScholar  The Publication Server of the Georg-August-Universit\u00e4t G\u00f6ttingen (Georg-August-Universit\u00e4t G\u00f6ttingen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210122495","host_organization_name":"Asklepios Klinik St. Georg","host_organization_lineage":["https://openalex.org/I4210122495"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"published_version"},{"id":"pmh:oai:publications.goettingen-research-online.de:2/163506","is_oa":true,"landing_page_url":"https://resolver.sub.uni-goettingen.de/purl?gro-2/163506","pdf_url":null,"source":{"id":"https://openalex.org/S4306401634","display_name":"GoeScholar  The Publication Server of the Georg-August-Universit\u00e4t G\u00f6ttingen (Georg-August-Universit\u00e4t G\u00f6ttingen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210122495","host_organization_name":"Asklepios Klinik St. Georg","host_organization_lineage":["https://openalex.org/I4210122495"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"published_version"},{"id":"pmh:oai:arXiv.org:2411.16445","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2411.16445","pdf_url":"https://arxiv.org/pdf/2411.16445","source":{"id":"https://openalex.org/S4393918464","display_name":"ArXiv.org","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},{"id":"pmh:doi:10.48550/arxiv.2411.16445","is_oa":true,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4406922384","display_name":"Open MIND","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"},{"id":"pmh:oai:doaj.org/article:18c2cc6ca1344c1da9838a8a9e44cf00","is_oa":true,"landing_page_url":"https://doaj.org/article/18c2cc6ca1344c1da9838a8a9e44cf00","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 22, Iss 2, p e1013926 (2026)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:11707322","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12900448","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:12900448","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12900448/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"},{"id":"doi:10.48550/arxiv.2411.16445","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2411.16445","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article"},{"id":"doi:10.5281/zenodo.18088336","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.18088336","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article"},{"id":"doi:10.5281/zenodo.18088337","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.18088337","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1013926","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1013926","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1967525652","display_name":null,"funder_award_id":"TE 1172/7-1","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G2730713857","display_name":null,"funder_award_id":"945539","funder_id":"https://openalex.org/F4320335254","funder_display_name":"Horizon 2020"},{"id":"https://openalex.org/G5131877326","display_name":null,"funder_award_id":"SFB1286","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G5557071460","display_name":null,"funder_award_id":"899265","funder_id":"https://openalex.org/F4320335254","funder_display_name":"Horizon 2020"},{"id":"https://openalex.org/G7842005466","display_name":null,"funder_award_id":"Horizon 2020","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"}],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"},{"id":"https://openalex.org/F4320335254","display_name":"Horizon 2020","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":89,"referenced_works":["https://openalex.org/W1969640985","https://openalex.org/W2971430069","https://openalex.org/W2087861759","https://openalex.org/W2969331319","https://openalex.org/W4283575111","https://openalex.org/W2912474515","https://openalex.org/W2148389554","https://openalex.org/W2954793775","https://openalex.org/W2153561332","https://openalex.org/W2783700293","https://openalex.org/W3047357274","https://openalex.org/W3146857810","https://openalex.org/W2028480985","https://openalex.org/W4229007840","https://openalex.org/W3207144141","https://openalex.org/W4382918240","https://openalex.org/W4390589568","https://openalex.org/W2161432648","https://openalex.org/W2952004797","https://openalex.org/W3133994644","https://openalex.org/W2147101007","https://openalex.org/W1486852018","https://openalex.org/W4231021340","https://openalex.org/W2075075402","https://openalex.org/W2076148352","https://openalex.org/W2153564253","https://openalex.org/W2072233684","https://openalex.org/W1986246844","https://openalex.org/W2151542182","https://openalex.org/W2578308616","https://openalex.org/W2103594871","https://openalex.org/W1997461667","https://openalex.org/W2286046377","https://openalex.org/W4251169672","https://openalex.org/W4404429443","https://openalex.org/W2122895127","https://openalex.org/W2751889032","https://openalex.org/W2123279902","https://openalex.org/W4231081240","https://openalex.org/W2155773585","https://openalex.org/W2007263885","https://openalex.org/W2169253528","https://openalex.org/W2048212809","https://openalex.org/W2011882079","https://openalex.org/W2014295524","https://openalex.org/W2069469260","https://openalex.org/W4283460321","https://openalex.org/W4213026120","https://openalex.org/W4307138641","https://openalex.org/W4395480775","https://openalex.org/W2066783383","https://openalex.org/W2022760627","https://openalex.org/W2079048646","https://openalex.org/W3025417206","https://openalex.org/W4214775604","https://openalex.org/W2117113597","https://openalex.org/W4376959108","https://openalex.org/W2164325529","https://openalex.org/W2768001808","https://openalex.org/W1985940938","https://openalex.org/W4313892406","https://openalex.org/W4312438958","https://openalex.org/W3167276600","https://openalex.org/W3102313165","https://openalex.org/W4386137619","https://openalex.org/W3127379532","https://openalex.org/W2737038943","https://openalex.org/W3137654048","https://openalex.org/W4390113411","https://openalex.org/W4403701631","https://openalex.org/W3213221518","https://openalex.org/W1969507049","https://openalex.org/W2122568884","https://openalex.org/W2548724400","https://openalex.org/W2963374959","https://openalex.org/W3102361357","https://openalex.org/W1923399679","https://openalex.org/W3003428608","https://openalex.org/W2127172689","https://openalex.org/W2724923515","https://openalex.org/W4226264440","https://openalex.org/W4405374647","https://openalex.org/W4394959356","https://openalex.org/W1979019425","https://openalex.org/W1655792606","https://openalex.org/W4394745146","https://openalex.org/W3123484130","https://openalex.org/W4310437741","https://openalex.org/W4387868798"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W1953677193","https://openalex.org/W3113362864","https://openalex.org/W2404000518","https://openalex.org/W589182691","https://openalex.org/W1993328117","https://openalex.org/W2358376734","https://openalex.org/W4288900686"],"abstract_inverted_index":{"Arbor":[0,106,161,185],"is":[1,85,186],"a":[2,44,112,219,225,252],"software":[3],"library":[4,107],"designed":[5],"for":[6,69],"efficient":[7,188],"simulation":[8],"of":[9,12,91,94,111,115,123,130,166,191,212,221,230,236,246,263],"large-scale":[10,92],"networks":[11,93,165],"biological":[13],"neurons":[14,97,168],"with":[15,26,98,134,155,269],"detailed":[16,96],"morphological":[17],"structures.":[18],"It":[19],"combines":[20],"customizable":[21],"neuronal":[22,270],"and":[23,32,37,52,77,141,193,233],"synaptic":[24,40,78,264],"mechanisms":[25],"high-performance":[27],"computing,":[28],"supporting":[29],"multi-core":[30],"CPU":[31],"GPU":[33],"systems.":[34],"In":[35,180],"humans":[36],"other":[38,156,199],"animals,":[39],"plasticity":[41,100,117],"processes":[42,61,79],"play":[43],"vital":[45],"role":[46],"in":[47,62,174,189,267,272],"cognitive":[48],"functions,":[49],"including":[50],"learning":[51],"memory.":[53],"Recent":[54],"studies":[55,259],"have":[56,103],"shown":[57],"that":[58,160,184,255],"intracellular":[59],"molecular":[60],"dendrites":[63,76],"significantly":[64],"influence":[65],"single-neuron":[66],"dynamics.":[67],"However,":[68],"understanding":[70],"how":[71],"the":[72,89,105,121,124,202,210,228,234,237,261],"complex":[73],"interplay":[74],"between":[75,227],"influences":[80],"network":[81,216,238],"dynamics,":[82,136],"computational":[83,131],"modeling":[84,90],"required.":[86],"To":[87,119],"enable":[88],"morphologically":[95],"diverse":[99],"processes,":[101],"we":[102,127,158,182,208,248],"extended":[104,125,203],"to":[108,138,145,177,198,239,250],"support":[109,257],"simulations":[110],"large":[113,146,273],"variety":[114],"spike-driven":[116],"paradigms.":[118],"showcase":[120],"features":[122],"framework,":[126,204],"present":[128],"examples":[129],"models,":[132],"beginning":[133],"single-synapse":[135],"progressing":[137],"multi-synapse":[139],"rules,":[140],"finally":[142],"scaling":[143],"up":[144],"recurrent":[147],"networks.":[148,274],"While":[149],"cross-validating":[150],"our":[151,244],"implementations":[152],"by":[153],"comparison":[154],"simulators,":[157],"show":[159],"allows":[162],"simulating":[163],"plastic":[164],"multi-compartment":[167],"at":[169],"nearly":[170],"no":[171],"additional":[172],"cost":[173],"runtime":[175,192],"compared":[176,197],"point-neuron":[178],"simulations.":[179],"addition,":[181],"demonstrate":[183],"highly":[187],"terms":[190],"memory":[194],"use":[195],"as":[196,205],"simulators.":[200],"Using":[201],"an":[206],"example,":[207],"investigate":[209],"impact":[211,262],"dendritic":[213,231],"structures":[214],"on":[215,260],"dynamics":[217],"across":[218],"timescale":[220],"several":[222],"hours,":[223],"finding":[224],"relation":[226],"length":[229],"trees":[232],"ability":[235],"efficiently":[240],"store":[241],"information.":[242],"By":[243],"extension":[245],"Arbor,":[247],"aim":[249],"provide":[251],"valuable":[253],"tool":[254],"will":[256],"future":[258],"plasticity,":[265],"especially,":[266],"conjunction":[268],"morphology,":[271]},"counts_by_year":[{"year":2026,"cited_by_count":1}],"updated_date":"2026-05-15T08:27:34.491423","created_date":"2024-12-04T00:00:00"}
