{"id":"https://openalex.org/W4415397575","doi":"https://doi.org/10.1371/journal.pcbi.1013516","title":"Scalable, trustworthy generative model for virtual multi-staining from H&amp;E whole slide images","display_name":"Scalable, trustworthy generative model for virtual multi-staining from H&amp;E whole slide images","publication_year":2025,"publication_date":"2025-10-21","ids":{"openalex":"https://openalex.org/W4415397575","doi":"https://doi.org/10.1371/journal.pcbi.1013516","pmid":"https://pubmed.ncbi.nlm.nih.gov/41118427"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1013516","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1013516","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1371/journal.pcbi.1013516","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5037337805","display_name":"Mehdi Ounissi","orcid":"https://orcid.org/0000-0003-0655-8112"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I1314596251","display_name":"Allen Institute for Brain Science","ror":"https://ror.org/00dcv1019","country_code":"US","type":"facility","lineage":["https://openalex.org/I1314596251","https://openalex.org/I4210140341"]},{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en sciences et technologies du num\u00e9rique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"government","lineage":["https://openalex.org/I1326498283"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I39804081","display_name":"Sorbonne Universit\u00e9","ror":"https://ror.org/02en5vm52","country_code":"FR","type":"education","lineage":["https://openalex.org/I39804081"]},{"id":"https://openalex.org/I4210097159","display_name":"Assistance Publique \u2013 H\u00f4pitaux de Paris","ror":"https://ror.org/00pg5jh14","country_code":"FR","type":"healthcare","lineage":["https://openalex.org/I4210097159"]},{"id":"https://openalex.org/I4210130152","display_name":"Institut de Psychiatrie et Neurosciences de Paris","ror":"https://ror.org/02g40zn06","country_code":"FR","type":"facility","lineage":["https://openalex.org/I154526488","https://openalex.org/I204730241","https://openalex.org/I4210130152","https://openalex.org/I4210160774"]},{"id":"https://openalex.org/I4210152724","display_name":"Institut du Cerveau","ror":"https://ror.org/050gn5214","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I39804081","https://openalex.org/I4210096427","https://openalex.org/I4210152724"]},{"id":"https://openalex.org/I4389425385","display_name":"Laboratoire M\u00e9diations","ror":"https://ror.org/04tb23024","country_code":"FR","type":"facility","lineage":["https://openalex.org/I39804081","https://openalex.org/I4389425385"]}],"countries":["FR","US"],"is_corresponding":true,"raw_author_name":"Mehdi Ounissi","raw_affiliation_strings":["Sorbonne Universit\u00e9; CNRS; Inserm; Inria; Paris Brain Institute - ICM; AP-HP, Paris, France","Paris Brain Institute \u2013 ICM","Inria","AP-HP, Paris, France","Inserm","Sorbonne Universit\u00e9"],"raw_orcid":"https://orcid.org/0000-0003-0655-8112","affiliations":[{"raw_affiliation_string":"Sorbonne Universit\u00e9; CNRS; Inserm; Inria; Paris Brain Institute - ICM; AP-HP, Paris, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I4210097159","https://openalex.org/I4210130152","https://openalex.org/I39804081","https://openalex.org/I154526488","https://openalex.org/I4210152724"]},{"raw_affiliation_string":"Paris Brain Institute \u2013 ICM","institution_ids":["https://openalex.org/I1314596251","https://openalex.org/I4210152724"]},{"raw_affiliation_string":"Inria","institution_ids":["https://openalex.org/I1326498283"]},{"raw_affiliation_string":"AP-HP, Paris, France","institution_ids":["https://openalex.org/I4210097159"]},{"raw_affiliation_string":"Inserm","institution_ids":["https://openalex.org/I154526488"]},{"raw_affiliation_string":"Sorbonne Universit\u00e9","institution_ids":["https://openalex.org/I4389425385","https://openalex.org/I39804081"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5114713648","display_name":"Ilias Sarbout","orcid":"https://orcid.org/0009-0003-4437-7897"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I1314596251","display_name":"Allen Institute for Brain Science","ror":"https://ror.org/00dcv1019","country_code":"US","type":"facility","lineage":["https://openalex.org/I1314596251","https://openalex.org/I4210140341"]},{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en sciences et technologies du num\u00e9rique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"government","lineage":["https://openalex.org/I1326498283"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I39804081","display_name":"Sorbonne Universit\u00e9","ror":"https://ror.org/02en5vm52","country_code":"FR","type":"education","lineage":["https://openalex.org/I39804081"]},{"id":"https://openalex.org/I4210097159","display_name":"Assistance Publique \u2013 H\u00f4pitaux de Paris","ror":"https://ror.org/00pg5jh14","country_code":"FR","type":"healthcare","lineage":["https://openalex.org/I4210097159"]},{"id":"https://openalex.org/I4210130152","display_name":"Institut de Psychiatrie et Neurosciences de Paris","ror":"https://ror.org/02g40zn06","country_code":"FR","type":"facility","lineage":["https://openalex.org/I154526488","https://openalex.org/I204730241","https://openalex.org/I4210130152","https://openalex.org/I4210160774"]},{"id":"https://openalex.org/I4210152724","display_name":"Institut du Cerveau","ror":"https://ror.org/050gn5214","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I39804081","https://openalex.org/I4210096427","https://openalex.org/I4210152724"]},{"id":"https://openalex.org/I4389425385","display_name":"Laboratoire M\u00e9diations","ror":"https://ror.org/04tb23024","country_code":"FR","type":"facility","lineage":["https://openalex.org/I39804081","https://openalex.org/I4389425385"]}],"countries":["FR","US"],"is_corresponding":true,"raw_author_name":"Ilias Sarbout","raw_affiliation_strings":["Sorbonne Universit\u00e9; CNRS; Inserm; Inria; Paris Brain Institute - ICM; AP-HP, Paris, France","Sorbonne Universit\u00e9","Inria","AP-HP, Paris, France","Paris Brain Institute \u2013 ICM","Inserm"],"raw_orcid":"https://orcid.org/0009-0003-4437-7897","affiliations":[{"raw_affiliation_string":"Sorbonne Universit\u00e9; CNRS; Inserm; Inria; Paris Brain Institute - ICM; AP-HP, Paris, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I4210097159","https://openalex.org/I4210130152","https://openalex.org/I39804081","https://openalex.org/I154526488","https://openalex.org/I4210152724"]},{"raw_affiliation_string":"Sorbonne Universit\u00e9","institution_ids":["https://openalex.org/I4389425385","https://openalex.org/I39804081"]},{"raw_affiliation_string":"Inria","institution_ids":["https://openalex.org/I1326498283"]},{"raw_affiliation_string":"AP-HP, Paris, France","institution_ids":["https://openalex.org/I4210097159"]},{"raw_affiliation_string":"Paris Brain Institute \u2013 ICM","institution_ids":["https://openalex.org/I1314596251","https://openalex.org/I4210152724"]},{"raw_affiliation_string":"Inserm","institution_ids":["https://openalex.org/I154526488"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073621875","display_name":"Jean\u2010Pierre Hugot","orcid":"https://orcid.org/0000-0002-8446-6056"},"institutions":[{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]},{"id":"https://openalex.org/I4210097159","display_name":"Assistance Publique \u2013 H\u00f4pitaux de Paris","ror":"https://ror.org/00pg5jh14","country_code":"FR","type":"healthcare","lineage":["https://openalex.org/I4210097159"]},{"id":"https://openalex.org/I4210130096","display_name":"Centre de Recherche sur l'Inflammation","ror":"https://ror.org/02gn50d10","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I204730241","https://openalex.org/I4210096427","https://openalex.org/I4210130096"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Jean-Pierre Hugot","raw_affiliation_strings":["Paris Cit\u00e9 University; AP-HP; Centre de Recherche sur l'inflammation, Paris, France","Paris Cit\u00e9 University","Centre de Recherche sur l'inflammation, Paris, France","AP-HP"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Paris Cit\u00e9 University; AP-HP; Centre de Recherche sur l'inflammation, Paris, France","institution_ids":["https://openalex.org/I4210130096","https://openalex.org/I204730241","https://openalex.org/I4210097159"]},{"raw_affiliation_string":"Paris Cit\u00e9 University","institution_ids":["https://openalex.org/I204730241"]},{"raw_affiliation_string":"Centre de Recherche sur l'inflammation, Paris, France","institution_ids":["https://openalex.org/I4210130096"]},{"raw_affiliation_string":"AP-HP","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067750790","display_name":"Christine Martinez\u2010Vinson","orcid":"https://orcid.org/0000-0002-3010-6442"},"institutions":[{"id":"https://openalex.org/I4210097159","display_name":"Assistance Publique \u2013 H\u00f4pitaux de Paris","ror":"https://ror.org/00pg5jh14","country_code":"FR","type":"healthcare","lineage":["https://openalex.org/I4210097159"]},{"id":"https://openalex.org/I4210126712","display_name":"H\u00f4pital Robert-Debr\u00e9","ror":"https://ror.org/02dcqy320","country_code":"FR","type":"healthcare","lineage":["https://openalex.org/I4210097159","https://openalex.org/I4210126712"]},{"id":"https://openalex.org/I4210130096","display_name":"Centre de Recherche sur l'Inflammation","ror":"https://ror.org/02gn50d10","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I204730241","https://openalex.org/I4210096427","https://openalex.org/I4210130096"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Christine Martinez-Vinson","raw_affiliation_strings":["AP-HP; Robert Debr\u00e9 University Hospitals; Centre de Recherche sur l'inflammation, Paris, France","AP-HP","Centre de Recherche sur l'inflammation, Paris, France","Robert Debr\u00e9 University Hospitals"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"AP-HP; Robert Debr\u00e9 University Hospitals; Centre de Recherche sur l'inflammation, Paris, France","institution_ids":["https://openalex.org/I4210130096","https://openalex.org/I4210126712","https://openalex.org/I4210097159"]},{"raw_affiliation_string":"AP-HP","institution_ids":[]},{"raw_affiliation_string":"Centre de Recherche sur l'inflammation, Paris, France","institution_ids":["https://openalex.org/I4210130096"]},{"raw_affiliation_string":"Robert Debr\u00e9 University Hospitals","institution_ids":["https://openalex.org/I4210126712"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5106234354","display_name":"Dominique Berrebi","orcid":null},"institutions":[{"id":"https://openalex.org/I1288880153","display_name":"H\u00f4pital Necker-Enfants Malades","ror":"https://ror.org/05tr67282","country_code":"FR","type":"healthcare","lineage":["https://openalex.org/I1288880153","https://openalex.org/I4210097159","https://openalex.org/I4210120235"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]},{"id":"https://openalex.org/I4210086369","display_name":"Institut Necker Enfants Malades","ror":"https://ror.org/000nhq538","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I204730241","https://openalex.org/I4210086369","https://openalex.org/I4210096427"]},{"id":"https://openalex.org/I4210097159","display_name":"Assistance Publique \u2013 H\u00f4pitaux de Paris","ror":"https://ror.org/00pg5jh14","country_code":"FR","type":"healthcare","lineage":["https://openalex.org/I4210097159"]},{"id":"https://openalex.org/I4210130096","display_name":"Centre de Recherche sur l'Inflammation","ror":"https://ror.org/02gn50d10","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I204730241","https://openalex.org/I4210096427","https://openalex.org/I4210130096"]},{"id":"https://openalex.org/I4210132727","display_name":"Analatom (United States)","ror":"https://ror.org/03djma825","country_code":"US","type":"company","lineage":["https://openalex.org/I4210132727"]}],"countries":["FR","US"],"is_corresponding":true,"raw_author_name":"Dominique Berrebi","raw_affiliation_strings":["Paris Cit\u00e9 University; Inserm; AP-HP; Necker-Enfants Malades University Hospitals; Anatomopathology Department; Centre de recherche sur l'inflammation, Paris, France","Inserm","AP-HP","Paris Cit\u00e9 University","Centre de recherche sur l'inflammation, Paris, France","Necker-Enfants Malades University Hospitals","Anatomopathology Department"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Paris Cit\u00e9 University; Inserm; AP-HP; Necker-Enfants Malades University Hospitals; Anatomopathology Department; Centre de recherche sur l'inflammation, Paris, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I204730241","https://openalex.org/I4210130096","https://openalex.org/I4210097159"]},{"raw_affiliation_string":"Inserm","institution_ids":["https://openalex.org/I154526488"]},{"raw_affiliation_string":"AP-HP","institution_ids":[]},{"raw_affiliation_string":"Paris Cit\u00e9 University","institution_ids":["https://openalex.org/I204730241"]},{"raw_affiliation_string":"Centre de recherche sur l'inflammation, Paris, France","institution_ids":["https://openalex.org/I4210130096"]},{"raw_affiliation_string":"Necker-Enfants Malades University Hospitals","institution_ids":["https://openalex.org/I4210086369","https://openalex.org/I1288880153"]},{"raw_affiliation_string":"Anatomopathology Department","institution_ids":["https://openalex.org/I4210132727"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5066171121","display_name":"Daniel Racoceanu","orcid":"https://orcid.org/0000-0002-9416-1803"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I1314596251","display_name":"Allen Institute for Brain Science","ror":"https://ror.org/00dcv1019","country_code":"US","type":"facility","lineage":["https://openalex.org/I1314596251","https://openalex.org/I4210140341"]},{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en sciences et technologies du num\u00e9rique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"government","lineage":["https://openalex.org/I1326498283"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I39804081","display_name":"Sorbonne Universit\u00e9","ror":"https://ror.org/02en5vm52","country_code":"FR","type":"education","lineage":["https://openalex.org/I39804081"]},{"id":"https://openalex.org/I4210097159","display_name":"Assistance Publique \u2013 H\u00f4pitaux de Paris","ror":"https://ror.org/00pg5jh14","country_code":"FR","type":"healthcare","lineage":["https://openalex.org/I4210097159"]},{"id":"https://openalex.org/I4210130152","display_name":"Institut de Psychiatrie et Neurosciences de Paris","ror":"https://ror.org/02g40zn06","country_code":"FR","type":"facility","lineage":["https://openalex.org/I154526488","https://openalex.org/I204730241","https://openalex.org/I4210130152","https://openalex.org/I4210160774"]},{"id":"https://openalex.org/I4210152724","display_name":"Institut du Cerveau","ror":"https://ror.org/050gn5214","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I39804081","https://openalex.org/I4210096427","https://openalex.org/I4210152724"]},{"id":"https://openalex.org/I4389425385","display_name":"Laboratoire M\u00e9diations","ror":"https://ror.org/04tb23024","country_code":"FR","type":"facility","lineage":["https://openalex.org/I39804081","https://openalex.org/I4389425385"]}],"countries":["FR","US"],"is_corresponding":true,"raw_author_name":"Daniel Racoceanu","raw_affiliation_strings":["Sorbonne Universit\u00e9; CNRS; Inserm; Inria; Paris Brain Institute - ICM; AP-HP, Paris, France","Inria","Sorbonne Universit\u00e9","Paris Brain Institute \u2013 ICM","AP-HP, Paris, France","Inserm"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Sorbonne Universit\u00e9; CNRS; Inserm; Inria; Paris Brain Institute - ICM; AP-HP, Paris, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I4210097159","https://openalex.org/I4210130152","https://openalex.org/I39804081","https://openalex.org/I154526488","https://openalex.org/I4210152724"]},{"raw_affiliation_string":"Inria","institution_ids":["https://openalex.org/I1326498283"]},{"raw_affiliation_string":"Sorbonne Universit\u00e9","institution_ids":["https://openalex.org/I4389425385","https://openalex.org/I39804081"]},{"raw_affiliation_string":"Paris Brain Institute \u2013 ICM","institution_ids":["https://openalex.org/I1314596251","https://openalex.org/I4210152724"]},{"raw_affiliation_string":"AP-HP, Paris, France","institution_ids":["https://openalex.org/I4210097159"]},{"raw_affiliation_string":"Inserm","institution_ids":["https://openalex.org/I154526488"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":15,"corresponding_author_ids":["https://openalex.org/A5037337805","https://openalex.org/A5066171121","https://openalex.org/A5067750790","https://openalex.org/A5073621875","https://openalex.org/A5106234354","https://openalex.org/A5114713648"],"corresponding_institution_ids":["https://openalex.org/I1288880153","https://openalex.org/I1294671590","https://openalex.org/I1314596251","https://openalex.org/I1326498283","https://openalex.org/I154526488","https://openalex.org/I204730241","https://openalex.org/I39804081","https://openalex.org/I4210086369","https://openalex.org/I4210097159","https://openalex.org/I4210126712","https://openalex.org/I4210130096","https://openalex.org/I4210130152","https://openalex.org/I4210132727","https://openalex.org/I4210152724","https://openalex.org/I4389425385"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":9.0011,"has_fulltext":true,"cited_by_count":7,"citation_normalized_percentile":{"value":0.97582879,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":95,"max":99},"biblio":{"volume":"21","issue":"10","first_page":"e1013516","last_page":"e1013516"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10775","display_name":"Generative Adversarial Networks and Image Synthesis","score":0.9958999752998352,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9945999979972839,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.5356000065803528},{"id":"https://openalex.org/keywords/stain","display_name":"Stain","score":0.46709999442100525},{"id":"https://openalex.org/keywords/flexibility","display_name":"Flexibility (engineering)","score":0.46380001306533813},{"id":"https://openalex.org/keywords/generative-grammar","display_name":"Generative grammar","score":0.4442000091075897},{"id":"https://openalex.org/keywords/adaptability","display_name":"Adaptability","score":0.4169999957084656},{"id":"https://openalex.org/keywords/generative-model","display_name":"Generative model","score":0.38929998874664307},{"id":"https://openalex.org/keywords/preprocessor","display_name":"Preprocessor","score":0.3659999966621399}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8141999840736389},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6003000140190125},{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.5356000065803528},{"id":"https://openalex.org/C2781294515","wikidata":"https://www.wikidata.org/wiki/Q2733470","display_name":"Stain","level":3,"score":0.46709999442100525},{"id":"https://openalex.org/C2780598303","wikidata":"https://www.wikidata.org/wiki/Q65921492","display_name":"Flexibility (engineering)","level":2,"score":0.46380001306533813},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4620000123977661},{"id":"https://openalex.org/C39890363","wikidata":"https://www.wikidata.org/wiki/Q36108","display_name":"Generative grammar","level":2,"score":0.4442000091075897},{"id":"https://openalex.org/C177606310","wikidata":"https://www.wikidata.org/wiki/Q5674297","display_name":"Adaptability","level":2,"score":0.4169999957084656},{"id":"https://openalex.org/C167966045","wikidata":"https://www.wikidata.org/wiki/Q5532625","display_name":"Generative model","level":3,"score":0.38929998874664307},{"id":"https://openalex.org/C34736171","wikidata":"https://www.wikidata.org/wiki/Q918333","display_name":"Preprocessor","level":2,"score":0.3659999966621399},{"id":"https://openalex.org/C117251300","wikidata":"https://www.wikidata.org/wiki/Q1849855","display_name":"Parametric statistics","level":2,"score":0.34790000319480896},{"id":"https://openalex.org/C107457646","wikidata":"https://www.wikidata.org/wiki/Q207434","display_name":"Human\u2013computer interaction","level":1,"score":0.34290000796318054},{"id":"https://openalex.org/C2779530757","wikidata":"https://www.wikidata.org/wiki/Q1207505","display_name":"Quality (philosophy)","level":2,"score":0.32190001010894775},{"id":"https://openalex.org/C50637493","wikidata":"https://www.wikidata.org/wiki/Q1136781","display_name":"Morphing","level":2,"score":0.31769999861717224},{"id":"https://openalex.org/C118505674","wikidata":"https://www.wikidata.org/wiki/Q42586063","display_name":"Encoder","level":2,"score":0.298799991607666},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.2948000133037567},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.2759000062942505},{"id":"https://openalex.org/C66024118","wikidata":"https://www.wikidata.org/wiki/Q1122506","display_name":"Computational model","level":2,"score":0.2556999921798706},{"id":"https://openalex.org/C187191949","wikidata":"https://www.wikidata.org/wiki/Q1138496","display_name":"Profiling (computer programming)","level":2,"score":0.2535000145435333},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.25049999356269836}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004801","descriptor_name":"Eosine Yellowish-(YS)","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004801","descriptor_name":"Eosine Yellowish-(YS)","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004801","descriptor_name":"Eosine Yellowish-(YS)","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006416","descriptor_name":"Hematoxylin","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D006416","descriptor_name":"Hematoxylin","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D006416","descriptor_name":"Hematoxylin","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D013194","descriptor_name":"Staining and Labeling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D013194","descriptor_name":"Staining and Labeling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D013194","descriptor_name":"Staining and Labeling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1371/journal.pcbi.1013516","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1013516","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:41118427","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/41118427","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:HAL:hal-05342286v1","is_oa":true,"landing_page_url":"https://hal.science/hal-05342286","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, 2025, 21 (10), pp.e1013516. &#x27E8;10.1371/journal.pcbi.1013516&#x27E9;","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:doaj.org/article:d72c07ca72fc47859f77e3bfb13d6371","is_oa":true,"landing_page_url":"https://doaj.org/article/d72c07ca72fc47859f77e3bfb13d6371","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 21, Iss 10, p e1013516 (2025)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:11387588","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12578341","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1013516","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1013516","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320326256","display_name":"Grand \u00c9quipement National De Calcul Intensif","ror":"https://ror.org/0010d1q40"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":43,"referenced_works":["https://openalex.org/W2031502025","https://openalex.org/W2234666690","https://openalex.org/W2312404985","https://openalex.org/W2339754110","https://openalex.org/W2771248105","https://openalex.org/W2773006292","https://openalex.org/W2783474005","https://openalex.org/W2794616003","https://openalex.org/W2884160046","https://openalex.org/W2905048871","https://openalex.org/W2917684769","https://openalex.org/W2952481429","https://openalex.org/W2955144441","https://openalex.org/W2962793481","https://openalex.org/W2963073614","https://openalex.org/W2963344645","https://openalex.org/W2963767194","https://openalex.org/W3004882697","https://openalex.org/W3008693315","https://openalex.org/W3010834500","https://openalex.org/W3015450039","https://openalex.org/W3026766084","https://openalex.org/W3027869849","https://openalex.org/W3034600949","https://openalex.org/W3035965352","https://openalex.org/W3093095586","https://openalex.org/W3099287508","https://openalex.org/W3099878876","https://openalex.org/W3104135675","https://openalex.org/W3141929194","https://openalex.org/W3191728126","https://openalex.org/W3197713479","https://openalex.org/W3203215276","https://openalex.org/W3216310288","https://openalex.org/W4210478102","https://openalex.org/W4225010001","https://openalex.org/W4281262413","https://openalex.org/W4283316793","https://openalex.org/W4283813454","https://openalex.org/W4292089000","https://openalex.org/W4320013936","https://openalex.org/W4323037718","https://openalex.org/W4385283815"],"related_works":[],"abstract_inverted_index":{"Chemical":[0],"staining":[1,209],"methods,":[2],"while":[3],"reliable,":[4],"are":[5],"time":[6],"consuming":[7],"and":[8,16,51,109,124,198,213,301,317,321],"can":[9],"be":[10,60],"resource-intensive,":[11],"involving":[12],"costly":[13],"chemical":[14,52],"reagents":[15],"raising":[17],"environmental":[18],"concerns.":[19],"This":[20,133,295],"underscores":[21],"the":[22,36,42,48,74,80,117,139,157,205,263,268,276,311],"compelling":[23],"need":[24,312],"for":[25,101,178,232,313,356],"alternative":[26],"solutions":[27],"such":[28],"as":[29],"virtual":[30,102,208],"staining,":[31],"which":[32],"not":[33],"only":[34,183],"accelerates":[35],"diagnostic":[37],"process":[38],"but":[39],"also":[40,173,325],"enhances":[41],"flexibility":[43],"of":[44,77,82,116,142,207,270,361],"stain":[45,103,131,154,234,303,358],"applications":[46],"without":[47],"associated":[49],"physical":[50],"costs.":[53],"Generative":[54],"artificial":[55],"intelligence":[56],"technologies":[57],"prove":[58],"to":[59,86,146,160,200,241,257,262,299,344,364],"immensely":[61],"useful":[62],"in":[63,68,138,210,219,243,280,289,368],"addressing":[64,318],"these":[65,83,220],"challenges.":[66,323],"However,":[67],"healthcare,":[69],"particularly":[70],"within":[71,111],"computational":[72,112,369],"pathology,":[73],"high-stakes":[75],"nature":[76],"decisions":[78],"complicates":[79],"adoption":[81],"tools":[84],"due":[85],"their":[87,244,304],"often":[88],"opaque":[89],"processes.":[90],"Our":[91],"work":[92],"introduces":[93],"an":[94,290],"innovative":[95],"approach":[96],"that":[97,128,150,259],"harnesses":[98],"generative":[99],"models":[100],"transformations,":[104],"improving":[105],"performance,":[106],"trustworthiness,":[107],"scalability,":[108],"adaptability":[110],"pathology.":[113,370],"The":[114],"core":[115],"proposed":[118],"methodology":[119,228],"involves":[120],"a":[121,147,167,225,308,335],"singular":[122],"Hematoxylin":[123],"Eosin":[125],"(H&E)":[126],"encoder":[127],"supports":[129],"multiple":[130],"decoders.":[132,158],"design":[134],"prioritizes":[135],"critical":[136],"regions":[137],"latent":[140],"space":[141],"H&E":[143,169,255,265,305],"tissues,":[144],"leading":[145],"richer":[148],"representation":[149],"enables":[151,297],"precise":[152],"synthetic":[153,221,272],"generation":[155,269],"by":[156,181],"Tested":[159],"simultaneously":[161],"generate":[162],"eight":[163,339],"different":[164,340],"stains":[165],"from":[166],"single":[168],"slide,":[170],"our":[171,287],"method":[172,288],"offers":[174],"significant":[175],"scalability":[176],"benefits":[177],"routine":[179],"use":[180],"loading":[182],"necessary":[184],"model":[185],"components":[186],"during":[187,193],"production.":[188],"We":[189],"integrate":[190],"label-free":[191],"knowledge":[192,316],"training,":[194],"using":[195,229],"loss":[196],"functions":[197],"regularization":[199],"minimize":[201],"artifacts,":[202],"thereby":[203],"enhancing":[204],"accuracy":[206],"both":[211],"paired":[212,341],"unpaired":[214],"settings.":[215],"To":[216],"build":[217],"trust":[218],"stains,":[222],"we":[223,248,284,332],"employ":[224],"real-time":[226,327],"self-inspection":[227],"trained":[230,264],"discriminators":[231],"each":[233,357],"type,":[235],"providing":[236,350],"pathologists":[237,278],"with":[238],"confidence":[239],"heatmaps":[240],"aid":[242],"evaluations.":[245],"In":[246],"addition,":[247],"perform":[249],"automatic":[250],"quality":[251],"checks":[252],"on":[253],"new":[254,282],"slides":[256,306],"ensure":[258],"they":[260],"conform":[261],"distribution,":[266],"guaranteeing":[267],"high-quality":[271],"stained":[273],"slides.":[274],"Recognizing":[275],"challenges":[277],"face":[279],"adopting":[281],"technologies,":[283],"have":[285,333],"encapsulated":[286],"open-source,":[291],"cloud-based":[292],"proof-of-concept":[293],"system.":[294],"system":[296],"users":[298],"easily":[300],"virtually":[302],"through":[307],"browser,":[309],"eliminating":[310],"specialized":[314],"technical":[315],"common":[319],"hardware":[320],"software":[322],"It":[324],"facilitates":[326],"user":[328],"feedback":[329],"integration.":[330],"Lastly,":[331],"curated":[334],"novel":[336],"dataset":[337],"comprising":[338],"H&E/stains":[342],"related":[343],"pediatric":[345],"Crohn's":[346],"disease":[347],"at":[348],"diagnosis,":[349],"30":[351],"whole":[352],"slide":[353],"images":[354],"(WSIs)":[355],"set":[359],"(total":[360],"480":[362],"WSIs)":[363],"stimulate":[365],"further":[366],"research":[367]},"counts_by_year":[{"year":2026,"cited_by_count":5},{"year":2025,"cited_by_count":2}],"updated_date":"2026-07-18T07:39:51.176621","created_date":"2025-10-22T00:00:00"}
