{"id":"https://openalex.org/W4409097335","doi":"https://doi.org/10.1371/journal.pcbi.1012876","title":"Host centric drug repurposing for viral diseases","display_name":"Host centric drug repurposing for viral diseases","publication_year":2025,"publication_date":"2025-04-02","ids":{"openalex":"https://openalex.org/W4409097335","doi":"https://doi.org/10.1371/journal.pcbi.1012876","pmid":"https://pubmed.ncbi.nlm.nih.gov/40173200"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1012876","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1012876","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1371/journal.pcbi.1012876","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5015164444","display_name":"Suzana de Siqueira Santos","orcid":"https://orcid.org/0000-0002-0535-0734"},"institutions":[{"id":"https://openalex.org/I44202434","display_name":"Funda\u00e7\u00e3o Getulio Vargas","ror":"https://ror.org/01evzkn27","country_code":"BR","type":"education","lineage":["https://openalex.org/I44202434"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Suzana de Siqueira Santos","raw_affiliation_strings":["Escola de Matem\u00e1tica Aplicada, Funda\u00e7\u00e3o Get\u00falio Vargas, Rio de Janeiro, Brazil"],"raw_orcid":"https://orcid.org/0000-0002-0535-0734","affiliations":[{"raw_affiliation_string":"Escola de Matem\u00e1tica Aplicada, Funda\u00e7\u00e3o Get\u00falio Vargas, Rio de Janeiro, Brazil","institution_ids":["https://openalex.org/I44202434"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090395493","display_name":"Haixuan Yang","orcid":"https://orcid.org/0000-0002-8724-4192"},"institutions":[{"id":"https://openalex.org/I188760350","display_name":"Ollscoil na Gaillimhe \u2013 University of Galway","ror":"https://ror.org/03bea9k73","country_code":"IE","type":"education","lineage":["https://openalex.org/I188760350"]}],"countries":["IE"],"is_corresponding":false,"raw_author_name":"Haixuan Yang","raw_affiliation_strings":["School of Mathematical & Statistical Sciences, University of Galway, Galway, Ireland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Mathematical & Statistical Sciences, University of Galway, Galway, Ireland","institution_ids":["https://openalex.org/I188760350"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5107112915","display_name":"Aldo Galeano","orcid":null},"institutions":[{"id":"https://openalex.org/I44202434","display_name":"Funda\u00e7\u00e3o Getulio Vargas","ror":"https://ror.org/01evzkn27","country_code":"BR","type":"education","lineage":["https://openalex.org/I44202434"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Aldo Galeano","raw_affiliation_strings":["Escola de Matem\u00e1tica Aplicada, Funda\u00e7\u00e3o Get\u00falio Vargas, Rio de Janeiro, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Escola de Matem\u00e1tica Aplicada, Funda\u00e7\u00e3o Get\u00falio Vargas, Rio de Janeiro, Brazil","institution_ids":["https://openalex.org/I44202434"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5030607460","display_name":"Alberto Paccanaro","orcid":"https://orcid.org/0000-0001-8059-1346"},"institutions":[{"id":"https://openalex.org/I184558857","display_name":"Royal Holloway University of London","ror":"https://ror.org/04g2vpn86","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I184558857"]},{"id":"https://openalex.org/I44202434","display_name":"Funda\u00e7\u00e3o Getulio Vargas","ror":"https://ror.org/01evzkn27","country_code":"BR","type":"education","lineage":["https://openalex.org/I44202434"]}],"countries":["BR","GB"],"is_corresponding":false,"raw_author_name":"Alberto Paccanaro","raw_affiliation_strings":["Department of Computer Science, Centre for Systems and Synthetic Biology, Royal Holloway, University of London, Egham Hill, Egham, United Kingdom","Escola de Matem\u00e1tica Aplicada, Funda\u00e7\u00e3o Get\u00falio Vargas, Rio de Janeiro, Brazil"],"raw_orcid":"https://orcid.org/0000-0001-8059-1346","affiliations":[{"raw_affiliation_string":"Department of Computer Science, Centre for Systems and Synthetic Biology, Royal Holloway, University of London, Egham Hill, Egham, United Kingdom","institution_ids":["https://openalex.org/I184558857"]},{"raw_affiliation_string":"Escola de Matem\u00e1tica Aplicada, Funda\u00e7\u00e3o Get\u00falio Vargas, Rio de Janeiro, Brazil","institution_ids":["https://openalex.org/I44202434"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.07041236,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"21","issue":"4","first_page":"e1012876","last_page":"e1012876"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.9930999875068665,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/drug-repositioning","display_name":"Drug repositioning","score":0.7636435031890869},{"id":"https://openalex.org/keywords/repurposing","display_name":"Repurposing","score":0.7301211357116699},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6673735976219177},{"id":"https://openalex.org/keywords/host","display_name":"Host (biology)","score":0.6339969038963318},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.5776919722557068},{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.49681952595710754},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.47413918375968933},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.45618098974227905},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.45270204544067383},{"id":"https://openalex.org/keywords/virus","display_name":"Virus","score":0.43670907616615295},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.3435896933078766},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.31287211179733276},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.12328088283538818},{"id":"https://openalex.org/keywords/pharmacology","display_name":"Pharmacology","score":0.08334314823150635}],"concepts":[{"id":"https://openalex.org/C103637391","wikidata":"https://www.wikidata.org/wiki/Q5308921","display_name":"Drug repositioning","level":3,"score":0.7636435031890869},{"id":"https://openalex.org/C519536355","wikidata":"https://www.wikidata.org/wiki/Q21021151","display_name":"Repurposing","level":2,"score":0.7301211357116699},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6673735976219177},{"id":"https://openalex.org/C126831891","wikidata":"https://www.wikidata.org/wiki/Q221673","display_name":"Host (biology)","level":2,"score":0.6339969038963318},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.5776919722557068},{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.49681952595710754},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.47413918375968933},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.45618098974227905},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.45270204544067383},{"id":"https://openalex.org/C2522874641","wikidata":"https://www.wikidata.org/wiki/Q808","display_name":"Virus","level":2,"score":0.43670907616615295},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.3435896933078766},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.31287211179733276},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.12328088283538818},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.08334314823150635},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000998","descriptor_name":"Antiviral Agents","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":true},{"descriptor_ui":"D000998","descriptor_name":"Antiviral Agents","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":true},{"descriptor_ui":"D000998","descriptor_name":"Antiviral Agents","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":true},{"descriptor_ui":"D000998","descriptor_name":"Antiviral Agents","qualifier_ui":"Q000627","qualifier_name":"therapeutic use","is_major_topic":true},{"descriptor_ui":"D000998","descriptor_name":"Antiviral Agents","qualifier_ui":"Q000627","qualifier_name":"therapeutic use","is_major_topic":true},{"descriptor_ui":"D000998","descriptor_name":"Antiviral Agents","qualifier_ui":"Q000627","qualifier_name":"therapeutic use","is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014777","descriptor_name":"Virus Diseases","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":true},{"descriptor_ui":"D014777","descriptor_name":"Virus Diseases","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":true},{"descriptor_ui":"D014777","descriptor_name":"Virus Diseases","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":true},{"descriptor_ui":"D014777","descriptor_name":"Virus Diseases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D014777","descriptor_name":"Virus Diseases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D014777","descriptor_name":"Virus Diseases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D054884","descriptor_name":"Host-Pathogen Interactions","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":true},{"descriptor_ui":"D054884","descriptor_name":"Host-Pathogen Interactions","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":true},{"descriptor_ui":"D054884","descriptor_name":"Host-Pathogen Interactions","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":true},{"descriptor_ui":"D058492","descriptor_name":"Drug Repositioning","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D058492","descriptor_name":"Drug Repositioning","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D058492","descriptor_name":"Drug Repositioning","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1371/journal.pcbi.1012876","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1012876","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:40173200","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40173200","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:europepmc.org:10864466","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12052139","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:repositorio.conacyt.gov.py:20.500.14066/4733","is_oa":true,"landing_page_url":"http://hdl.handle.net/20.500.14066/4733","pdf_url":null,"source":{"id":"https://openalex.org/S7407055437","display_name":"Repositorio Institucional CONACYT","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1012876","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1012876","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1683500639","display_name":null,"funder_award_id":"BB/K004131/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G1779027865","display_name":"Collaborative Proposal: ABI Innovation:A Graph Based Approach for the Genome Wide Prediction of Conditionaly Essential Genes","funder_award_id":"1660648","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G2087956689","display_name":null,"funder_award_id":"PINV01-719","funder_id":"https://openalex.org/F4320321739","funder_display_name":"Consejo Nacional de Ciencia y Tecnolog\u00eda"},{"id":"https://openalex.org/G2315406122","display_name":null,"funder_award_id":"MR/ T001070/1","funder_id":"https://openalex.org/F4320334626","funder_display_name":"Medical Research Council"},{"id":"https://openalex.org/G3011078955","display_name":null,"funder_award_id":"PINV01-719","funder_id":"https://openalex.org/F4320328088","funder_display_name":"Consejo Nacional de Ciencia y Tecnolog\u00eda, Paraguay"},{"id":"https://openalex.org/G3571901485","display_name":null,"funder_award_id":"BB/F00964X/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G3836496091","display_name":null,"funder_award_id":"311181/2022-8","funder_id":"https://openalex.org/F4320322025","funder_display_name":"Conselho Nacional de Desenvolvimento Cient\u00edfico e Tecnol\u00f3gico"},{"id":"https://openalex.org/G4360653883","display_name":null,"funder_award_id":"PINV01-108","funder_id":"https://openalex.org/F4320321739","funder_display_name":"Consejo Nacional de Ciencia y Tecnolog\u00eda"},{"id":"https://openalex.org/G4696613433","display_name":"Development of a graph-theoretic approach to predict protein function by integrating large scale heterogeneous data","funder_award_id":"BB/F00964X/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G5515150595","display_name":"A GPU-based high performance system for discovering consensus domain architecture and functional annotation of protein families","funder_award_id":"BB/K004131/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G5741163287","display_name":null,"funder_award_id":"PINV01-108","funder_id":"https://openalex.org/F4320328088","funder_display_name":"Consejo Nacional de Ciencia y Tecnolog\u00eda, Paraguay"},{"id":"https://openalex.org/G6294885542","display_name":null,"funder_award_id":"BB/M025047/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G6631104955","display_name":null,"funder_award_id":"MR/T001070/1","funder_id":"https://openalex.org/F4320334626","funder_display_name":"Medical Research Council"},{"id":"https://openalex.org/G7350682491","display_name":null,"funder_award_id":"PINV20-337","funder_id":"https://openalex.org/F4320328088","funder_display_name":"Consejo Nacional de Ciencia y Tecnolog\u00eda, Paraguay"},{"id":"https://openalex.org/G7936953793","display_name":null,"funder_award_id":"BB/K004131/1, BB/F00964X/1, and BB/ M025047/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G8178985191","display_name":null,"funder_award_id":"and BB/ M025047/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G825172931","display_name":null,"funder_award_id":"14-INV-088, PINV15\u2013315, PINV20-337, PINV01-719,PINV01-108","funder_id":"https://openalex.org/F4320328088","funder_display_name":"Consejo Nacional de Ciencia y Tecnolog\u00eda, Paraguay"},{"id":"https://openalex.org/G8336103394","display_name":null,"funder_award_id":"E-26/ 201.079/2021 (260380) and E-26/204.352/2024","funder_id":"https://openalex.org/F4320322749","funder_display_name":"Funda\u00e7\u00e3o Carlos Chagas Filho de Amparo \u00e0 Pesquisa do Estado do Rio de Janeiro"},{"id":"https://openalex.org/G8458666535","display_name":null,"funder_award_id":"14-INV-088","funder_id":"https://openalex.org/F4320328088","funder_display_name":"Consejo Nacional de Ciencia y Tecnolog\u00eda, Paraguay"},{"id":"https://openalex.org/G8510677","display_name":null,"funder_award_id":"PINV15\u2013315","funder_id":"https://openalex.org/F4320328088","funder_display_name":"Consejo Nacional de Ciencia y Tecnolog\u00eda, Paraguay"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320316954","display_name":"Funda\u00e7\u00e3o Getulio Vargas","ror":"https://ror.org/01evzkn27"},{"id":"https://openalex.org/F4320321091","display_name":"Coordena\u00e7\u00e3o de Aperfei\u00e7oamento de Pessoal de N\u00edvel Superior","ror":"https://ror.org/00x0ma614"},{"id":"https://openalex.org/F4320321739","display_name":"Consejo Nacional de Ciencia y Tecnolog\u00eda","ror":"https://ror.org/059ex5q34"},{"id":"https://openalex.org/F4320322025","display_name":"Conselho Nacional de Desenvolvimento Cient\u00edfico e Tecnol\u00f3gico","ror":"https://ror.org/03swz6y49"},{"id":"https://openalex.org/F4320322749","display_name":"Funda\u00e7\u00e3o Carlos Chagas Filho de Amparo \u00e0 Pesquisa do Estado do Rio de Janeiro","ror":"https://ror.org/03kk0s825"},{"id":"https://openalex.org/F4320328088","display_name":"Consejo Nacional de Ciencia y Tecnolog\u00eda, Paraguay","ror":"https://ror.org/00aejfc65"},{"id":"https://openalex.org/F4320332167","display_name":"Directorate for Biological Sciences","ror":"https://ror.org/001xhss06"},{"id":"https://openalex.org/F4320334626","display_name":"Medical Research Council","ror":"https://ror.org/03x94j517"},{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":60,"referenced_works":["https://openalex.org/W15243013","https://openalex.org/W1774304772","https://openalex.org/W1902027874","https://openalex.org/W1970148391","https://openalex.org/W1987971958","https://openalex.org/W1988532315","https://openalex.org/W2010457001","https://openalex.org/W2017288758","https://openalex.org/W2020541351","https://openalex.org/W2021275530","https://openalex.org/W2038601283","https://openalex.org/W2043620814","https://openalex.org/W2062533676","https://openalex.org/W2074998873","https://openalex.org/W2096314274","https://openalex.org/W2110065044","https://openalex.org/W2117119827","https://openalex.org/W2117420919","https://openalex.org/W2137052779","https://openalex.org/W2150837053","https://openalex.org/W2152061559","https://openalex.org/W2153499010","https://openalex.org/W2165858555","https://openalex.org/W2239089357","https://openalex.org/W2263739890","https://openalex.org/W2303243520","https://openalex.org/W2340590411","https://openalex.org/W2590119696","https://openalex.org/W2590932802","https://openalex.org/W2753953057","https://openalex.org/W2757983152","https://openalex.org/W2763172433","https://openalex.org/W2767891136","https://openalex.org/W2801251501","https://openalex.org/W2809156537","https://openalex.org/W2955056739","https://openalex.org/W2980655992","https://openalex.org/W3022285953","https://openalex.org/W3023084036","https://openalex.org/W3033000020","https://openalex.org/W3085898256","https://openalex.org/W3097857367","https://openalex.org/W3121391924","https://openalex.org/W3126615408","https://openalex.org/W3127559895","https://openalex.org/W3158868742","https://openalex.org/W3177764134","https://openalex.org/W3192740204","https://openalex.org/W3195566828","https://openalex.org/W3204130420","https://openalex.org/W3212288810","https://openalex.org/W3217681006","https://openalex.org/W4200253063","https://openalex.org/W4206047124","https://openalex.org/W4220739067","https://openalex.org/W4221108525","https://openalex.org/W4226137448","https://openalex.org/W4282045748","https://openalex.org/W4294216483","https://openalex.org/W4392718566"],"related_works":["https://openalex.org/W2899096130","https://openalex.org/W3190782215","https://openalex.org/W2902729297","https://openalex.org/W3110500039","https://openalex.org/W4255531208","https://openalex.org/W4396858017","https://openalex.org/W4400165188","https://openalex.org/W4206422705","https://openalex.org/W4320009247","https://openalex.org/W3186872001"],"abstract_inverted_index":{"Computational":[0],"approaches":[1],"for":[2,5,36,50],"drug":[3,118],"repurposing":[4],"viral":[6,170,193],"diseases":[7,194],"have":[8,150],"mainly":[9],"focused":[10],"on":[11,39,81,183],"a":[12,40,65,100],"small":[13],"number":[14],"of":[15,44,94,105,169,178],"antivirals":[16,107],"that":[17,46,54,76,147,154,161],"directly":[18],"target":[19],"pathogens":[20],"(virus":[21],"centric":[22,52],"therapies).":[23],"In":[24],"this":[25],"work,":[26],"we":[27,87],"combine":[28],"ideas":[29],"from":[30],"collaborative":[31],"filtering":[32],"and":[33,78,97,119,126,137,153,187,195],"network":[34],"medicine":[35],"making":[37],"predictions":[38,149],"much":[41],"larger":[42],"set":[43],"drugs":[45,77],"could":[47],"be":[48,128,189],"repurposed":[49],"host":[51,60,141],"therapies,":[53],"are":[55,108,143],"aimed":[56],"at":[57],"interfering":[58],"with":[59,134],"cell":[61],"factors":[62],"required":[63],"by":[64,110],"pathogen.":[66],"Our":[67,122,172],"idea":[68],"is":[69,124],"to":[70,91,131,191],"create":[71],"matrices":[72,90],"quantifying":[73],"the":[74,112,116,155,166],"perturbation":[75],"viruses":[79],"induce":[80],"human":[82],"protein":[83],"interaction":[84],"networks.":[85],"Then,":[86],"decompose":[88],"these":[89],"learn":[92],"embeddings":[93,156],"drugs,":[95],"viruses,":[96],"proteins":[98,142],"in":[99],"low":[101],"dimensional":[102],"space.":[103],"Predictions":[104],"host-centric":[106],"obtained":[109],"taking":[111],"dot":[113],"product":[114],"between":[115],"corresponding":[117],"virus":[120,139],"representations.":[121],"approach":[123,173],"general":[125],"can":[127,174,188],"applied":[129,190],"systematically":[130],"any":[132,138],"compound":[133],"known":[135,184],"targets":[136],"whose":[140],"known.":[144],"We":[145],"show":[146],"our":[148],"high":[151],"accuracy":[152],"contain":[157],"meaningful":[158],"biological":[159],"information":[160],"may":[162],"provide":[163],"insights":[164],"into":[165],"underlying":[167],"biology":[168],"infections.":[171],"integrate":[175],"different":[176],"types":[177],"information,":[179],"does":[180],"not":[181],"rely":[182],"drug-virus":[185],"associations":[186],"new":[192],"drugs.":[196]},"counts_by_year":[],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
