{"id":"https://openalex.org/W4406657590","doi":"https://doi.org/10.1371/journal.pcbi.1012743","title":"Connectome-based biophysical models of pathological protein spreading in neurodegenerative diseases","display_name":"Connectome-based biophysical models of pathological protein spreading in neurodegenerative diseases","publication_year":2025,"publication_date":"2025-01-21","ids":{"openalex":"https://openalex.org/W4406657590","doi":"https://doi.org/10.1371/journal.pcbi.1012743","pmid":"https://pubmed.ncbi.nlm.nih.gov/39836660"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1012743","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1012743","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1012743&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1012743&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5067721153","display_name":"Peng Ren","orcid":"https://orcid.org/0000-0002-4717-1267"},"institutions":[{"id":"https://openalex.org/I204983213","display_name":"Harbin Institute of Technology","ror":"https://ror.org/01yqg2h08","country_code":"CN","type":"education","lineage":["https://openalex.org/I204983213"]},{"id":"https://openalex.org/I24943067","display_name":"Fudan University","ror":"https://ror.org/013q1eq08","country_code":"CN","type":"education","lineage":["https://openalex.org/I24943067"]},{"id":"https://openalex.org/I4210159575","display_name":"Huashan Hospital","ror":"https://ror.org/05201qm87","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210159575"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Peng Ren","raw_affiliation_strings":["Institute of Science and Technology for Brain-Inspired Intelligence and Department of Neurology, Huashan Hospital, Fudan University, Shanghai, China","Research Center for Social Computing and Information Retrieval, Harbin Institute of Technology, Harbin, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Science and Technology for Brain-Inspired Intelligence and Department of Neurology, Huashan Hospital, Fudan University, Shanghai, China","institution_ids":["https://openalex.org/I24943067","https://openalex.org/I4210159575"]},{"raw_affiliation_string":"Research Center for Social Computing and Information Retrieval, Harbin Institute of Technology, Harbin, China","institution_ids":["https://openalex.org/I204983213"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109740786","display_name":"Xuehua Cui","orcid":null},"institutions":[{"id":"https://openalex.org/I204983213","display_name":"Harbin Institute of Technology","ror":"https://ror.org/01yqg2h08","country_code":"CN","type":"education","lineage":["https://openalex.org/I204983213"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xuehua Cui","raw_affiliation_strings":["Frontiers Science Center for Matter Behave in Space Environment, Harbin Institute of Technology, Harbin, China","Research Center for Social Computing and Information Retrieval, Harbin Institute of Technology, Harbin, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Frontiers Science Center for Matter Behave in Space Environment, Harbin Institute of Technology, Harbin, China","institution_ids":["https://openalex.org/I204983213"]},{"raw_affiliation_string":"Research Center for Social Computing and Information Retrieval, Harbin Institute of Technology, Harbin, China","institution_ids":["https://openalex.org/I204983213"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5014222735","display_name":"Xia Liang","orcid":"https://orcid.org/0000-0003-3747-0746"},"institutions":[{"id":"https://openalex.org/I204983213","display_name":"Harbin Institute of Technology","ror":"https://ror.org/01yqg2h08","country_code":"CN","type":"education","lineage":["https://openalex.org/I204983213"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xia Liang","raw_affiliation_strings":["Frontiers Science Center for Matter Behave in Space Environment, Harbin Institute of Technology, Harbin, China","Research Center for Social Computing and Information Retrieval, Harbin Institute of Technology, Harbin, China"],"raw_orcid":"https://orcid.org/0000-0003-3747-0746","affiliations":[{"raw_affiliation_string":"Frontiers Science Center for Matter Behave in Space Environment, Harbin Institute of Technology, Harbin, China","institution_ids":["https://openalex.org/I204983213"]},{"raw_affiliation_string":"Research Center for Social Computing and Information Retrieval, Harbin Institute of Technology, Harbin, China","institution_ids":["https://openalex.org/I204983213"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5014222735","https://openalex.org/A5067721153","https://openalex.org/A5109740786"],"corresponding_institution_ids":["https://openalex.org/I204983213","https://openalex.org/I24943067","https://openalex.org/I4210159575"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":3.3208,"has_fulltext":true,"cited_by_count":5,"citation_normalized_percentile":{"value":0.91230352,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":98},"biblio":{"volume":"21","issue":"1","first_page":"e1012743","last_page":"e1012743"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10086","display_name":"Alzheimer's disease research and treatments","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/2737","display_name":"Physiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10086","display_name":"Alzheimer's disease research and treatments","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/2737","display_name":"Physiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11335","display_name":"Prion Diseases and Protein Misfolding","score":0.9973000288009644,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/connectome","display_name":"Connectome","score":0.8453494310379028},{"id":"https://openalex.org/keywords/neuroscience","display_name":"Neuroscience","score":0.6471020579338074},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4895104169845581},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.4710295796394348},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4025290608406067},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3659075200557709},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.33271893858909607},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.2971290647983551},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.1272193193435669},{"id":"https://openalex.org/keywords/functional-connectivity","display_name":"Functional connectivity","score":0.11509537696838379}],"concepts":[{"id":"https://openalex.org/C45715564","wikidata":"https://www.wikidata.org/wiki/Q1292103","display_name":"Connectome","level":3,"score":0.8453494310379028},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.6471020579338074},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4895104169845581},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.4710295796394348},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4025290608406067},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3659075200557709},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.33271893858909607},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.2971290647983551},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.1272193193435669},{"id":"https://openalex.org/C3018011982","wikidata":"https://www.wikidata.org/wiki/Q7316120","display_name":"Functional connectivity","level":2,"score":0.11509537696838379}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008959","descriptor_name":"Models, Neurological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008959","descriptor_name":"Models, Neurological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008959","descriptor_name":"Models, Neurological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008959","descriptor_name":"Models, Neurological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019636","descriptor_name":"Neurodegenerative Diseases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D019636","descriptor_name":"Neurodegenerative Diseases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D019636","descriptor_name":"Neurodegenerative Diseases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D019636","descriptor_name":"Neurodegenerative Diseases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D019636","descriptor_name":"Neurodegenerative Diseases","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D019636","descriptor_name":"Neurodegenerative Diseases","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D019636","descriptor_name":"Neurodegenerative Diseases","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D019636","descriptor_name":"Neurodegenerative Diseases","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D019636","descriptor_name":"Neurodegenerative Diseases","qualifier_ui":"Q000503","qualifier_name":"physiopathology","is_major_topic":true},{"descriptor_ui":"D019636","descriptor_name":"Neurodegenerative Diseases","qualifier_ui":"Q000503","qualifier_name":"physiopathology","is_major_topic":true},{"descriptor_ui":"D019636","descriptor_name":"Neurodegenerative Diseases","qualifier_ui":"Q000503","qualifier_name":"physiopathology","is_major_topic":true},{"descriptor_ui":"D019636","descriptor_name":"Neurodegenerative Diseases","qualifier_ui":"Q000503","qualifier_name":"physiopathology","is_major_topic":true},{"descriptor_ui":"D063132","descriptor_name":"Connectome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D063132","descriptor_name":"Connectome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D063132","descriptor_name":"Connectome","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D063132","descriptor_name":"Connectome","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1371/journal.pcbi.1012743","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1012743","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1012743&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:39836660","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39836660","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11750110","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11750110","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11750110/pdf/pcbi.1012743.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:1b980ed11aad416e8c629dbcd7aa9fc5","is_oa":true,"landing_page_url":"https://doaj.org/article/1b980ed11aad416e8c629dbcd7aa9fc5","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 21, Iss 1, p e1012743 (2025)","raw_type":"article"},{"id":"pmh:oai:doaj.org/article:f66097047d884f819d90a613eca35e74","is_oa":true,"landing_page_url":"https://doaj.org/article/f66097047d884f819d90a613eca35e74","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 21, Iss 1 (2025)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1012743","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1012743","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1012743&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.8399999737739563,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"awards":[{"id":"https://openalex.org/G2215899609","display_name":null,"funder_award_id":"YQ2023H016","funder_id":"https://openalex.org/F4320323085","funder_display_name":"Natural Science Foundation of Heilongjiang Province"},{"id":"https://openalex.org/G2804982011","display_name":null,"funder_award_id":"82072000","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6151063155","display_name":null,"funder_award_id":"HIT.OCEF.2013015","funder_id":"https://openalex.org/F4320335880","funder_display_name":"Fundamental Research Funds for Central Universities of the Central South University"}],"funders":[{"id":"https://openalex.org/F4320310638","display_name":"McGill University","ror":"https://ror.org/01pxwe438"},{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321806","display_name":"Lunds Universitet","ror":"https://ror.org/012a77v79"},{"id":"https://openalex.org/F4320323085","display_name":"Natural Science Foundation of Heilongjiang Province","ror":null},{"id":"https://openalex.org/F4320329878","display_name":"Central University Basic Research Fund of China","ror":null},{"id":"https://openalex.org/F4320335880","display_name":"Fundamental Research Funds for Central Universities of the Central South University","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4406657590.pdf","grobid_xml":"https://content.openalex.org/works/W4406657590.grobid-xml"},"referenced_works_count":92,"referenced_works":["https://openalex.org/W20120559","https://openalex.org/W211905087","https://openalex.org/W658341232","https://openalex.org/W1616122655","https://openalex.org/W1786270771","https://openalex.org/W1973897761","https://openalex.org/W1984737558","https://openalex.org/W1989854445","https://openalex.org/W2016787780","https://openalex.org/W2024729467","https://openalex.org/W2030539428","https://openalex.org/W2034147064","https://openalex.org/W2064661524","https://openalex.org/W2065971926","https://openalex.org/W2076220672","https://openalex.org/W2076844276","https://openalex.org/W2079598623","https://openalex.org/W2080816290","https://openalex.org/W2089691915","https://openalex.org/W2101009033","https://openalex.org/W2101805339","https://openalex.org/W2103717170","https://openalex.org/W2111216320","https://openalex.org/W2113872068","https://openalex.org/W2115298392","https://openalex.org/W2129823286","https://openalex.org/W2133646735","https://openalex.org/W2135563234","https://openalex.org/W2152346792","https://openalex.org/W2167840686","https://openalex.org/W2169135478","https://openalex.org/W2340630205","https://openalex.org/W2499800833","https://openalex.org/W2510842841","https://openalex.org/W2593979775","https://openalex.org/W2779111914","https://openalex.org/W2781096668","https://openalex.org/W2782253995","https://openalex.org/W2791831001","https://openalex.org/W2794102968","https://openalex.org/W2909629350","https://openalex.org/W2912390532","https://openalex.org/W2919457122","https://openalex.org/W2945029636","https://openalex.org/W2951001090","https://openalex.org/W2955206882","https://openalex.org/W2965427641","https://openalex.org/W2965760658","https://openalex.org/W2971637931","https://openalex.org/W2980552311","https://openalex.org/W2990594508","https://openalex.org/W2994386009","https://openalex.org/W3007465749","https://openalex.org/W3014564914","https://openalex.org/W3028531034","https://openalex.org/W3030476832","https://openalex.org/W3033511824","https://openalex.org/W3087738204","https://openalex.org/W3093872762","https://openalex.org/W3101386509","https://openalex.org/W3109359388","https://openalex.org/W3116894097","https://openalex.org/W3120633947","https://openalex.org/W3131204740","https://openalex.org/W3155846106","https://openalex.org/W3156447790","https://openalex.org/W3157186248","https://openalex.org/W3157433490","https://openalex.org/W3163573529","https://openalex.org/W3168810092","https://openalex.org/W4200091647","https://openalex.org/W4210468844","https://openalex.org/W4210568196","https://openalex.org/W4212965895","https://openalex.org/W4213095798","https://openalex.org/W4224252863","https://openalex.org/W4226313612","https://openalex.org/W4238660114","https://openalex.org/W4281258754","https://openalex.org/W4281555040","https://openalex.org/W4281823709","https://openalex.org/W4281842027","https://openalex.org/W4282944094","https://openalex.org/W4307494802","https://openalex.org/W4309947195","https://openalex.org/W4311213898","https://openalex.org/W4311586204","https://openalex.org/W4312629265","https://openalex.org/W4386121835","https://openalex.org/W4386272080","https://openalex.org/W4392161922","https://openalex.org/W6657998542"],"related_works":["https://openalex.org/W2043847720","https://openalex.org/W4312963348","https://openalex.org/W1744057168","https://openalex.org/W2962960039","https://openalex.org/W3180551345","https://openalex.org/W3019511099","https://openalex.org/W4287102215","https://openalex.org/W4380291026","https://openalex.org/W2111650087","https://openalex.org/W1995085194"],"abstract_inverted_index":{"Neurodegenerative":[0],"diseases":[1,37],"are":[2,52],"a":[3,94,166],"group":[4],"of":[5,13,17,22,35,70,108,137,150,172,200],"disorders":[6],"characterized":[7],"by":[8],"progressive":[9],"degeneration":[10],"or":[11],"death":[12],"neurons.":[14],"The":[15,33],"complexity":[16],"clinical":[18,198],"symptoms":[19],"and":[20,48,73,119,141,148,164,194],"irreversibility":[21],"disease":[23],"progression":[24],"significantly":[25],"affects":[26],"individual":[27],"lives,":[28],"leading":[29],"to":[30,82,104],"premature":[31],"mortality.":[32],"prevalence":[34],"neurodegenerative":[36],"keeps":[38],"increasing,":[39],"yet":[40],"the":[41,61,79,106,111,115,120,135,146,151,170,183,197],"specific":[42],"pathogenic":[43],"mechanisms":[44],"remain":[45],"incompletely":[46],"understood":[47],"effective":[49],"treatment":[50],"strategies":[51],"lacking.":[53],"In":[54],"recent":[55],"years,":[56],"convergent":[57],"experimental":[58],"evidence":[59],"supports":[60],"\"prion-like":[62],"transmission\"":[63],"assumption":[64],"that":[65,178],"abnormal":[66],"proteins":[67,76],"induce":[68],"misfolding":[69],"normal":[71],"proteins,":[72],"these":[74],"misfolded":[75],"propagate":[77],"throughout":[78],"neural":[80],"networks":[81],"cause":[83],"neuronal":[84],"death.":[85],"To":[86],"elucidate":[87],"this":[88,155,179,189],"dynamic":[89],"process":[90],"in":[91,188],"vivo":[92],"from":[93],"computational":[95],"perspective,":[96],"researchers":[97,187],"have":[98,126],"proposed":[99],"three":[100],"connectome-based":[101,173,201],"biophysical":[102,174,202],"models":[103,125],"simulate":[105],"spread":[107],"pathological":[109],"proteins:":[110],"Network":[112],"Diffusion":[113],"Model,":[114,118],"Epidemic":[116],"Spreading":[117],"agent-based":[121],"Susceptible-Infectious-Removed":[122],"model.":[123],"These":[124],"demonstrated":[127],"promising":[128],"predictive":[129],"capabilities.":[130],"This":[131],"review":[132,180],"focuses":[133],"on":[134],"explanations":[136],"their":[138],"fundamental":[139],"principles":[140],"applications.":[142],"Then,":[143],"we":[144,157],"compare":[145],"strengths":[147],"weaknesses":[149],"models.":[152,175,203],"Building":[153],"upon":[154],"foundation,":[156],"introduce":[158],"new":[159],"directions":[160],"for":[161,169,186],"model":[162,192],"optimization":[163],"propose":[165],"unified":[167],"framework":[168],"evaluation":[171],"We":[176],"expect":[177],"could":[181],"lower":[182],"entry":[184],"barrier":[185],"field,":[190],"accelerate":[191],"optimization,":[193],"thereby":[195],"advance":[196],"translation":[199]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":3}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
