{"id":"https://openalex.org/W4396949320","doi":"https://doi.org/10.1371/journal.pcbi.1012018","title":"Ten simple rules for teaching an introduction to R","display_name":"Ten simple rules for teaching an introduction to R","publication_year":2024,"publication_date":"2024-05-16","ids":{"openalex":"https://openalex.org/W4396949320","doi":"https://doi.org/10.1371/journal.pcbi.1012018","pmid":"https://pubmed.ncbi.nlm.nih.gov/38753606"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1012018","is_oa":true,"landing_page_url":"http://dx.doi.org/10.1371/journal.pcbi.1012018","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1012018&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"editorial","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1012018&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5087555123","display_name":"Ava M. Hoffman","orcid":"https://orcid.org/0000-0002-1833-4397"},"institutions":[{"id":"https://openalex.org/I145311948","display_name":"Johns Hopkins University","ror":"https://ror.org/00za53h95","country_code":"US","type":"education","lineage":["https://openalex.org/I145311948"]},{"id":"https://openalex.org/I4210089486","display_name":"Fred Hutch Cancer Center","ror":"https://ror.org/007ps6h72","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210089486"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Ava M. Hoffman","raw_affiliation_strings":["Biostatistics Program, Fred Hutchinson Cancer Center, Seattle, Washington, United States of America","Department of Biostatistics, Johns Hopkins University, Baltimore, Maryland, United States of America"],"affiliations":[{"raw_affiliation_string":"Biostatistics Program, Fred Hutchinson Cancer Center, Seattle, Washington, United States of America","institution_ids":["https://openalex.org/I4210089486"]},{"raw_affiliation_string":"Department of Biostatistics, Johns Hopkins University, Baltimore, Maryland, United States of America","institution_ids":["https://openalex.org/I145311948"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5013153329","display_name":"Carrie Wright","orcid":"https://orcid.org/0000-0003-1325-6067"},"institutions":[{"id":"https://openalex.org/I145311948","display_name":"Johns Hopkins University","ror":"https://ror.org/00za53h95","country_code":"US","type":"education","lineage":["https://openalex.org/I145311948"]},{"id":"https://openalex.org/I4210089486","display_name":"Fred Hutch Cancer Center","ror":"https://ror.org/007ps6h72","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210089486"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Carrie Wright","raw_affiliation_strings":["Biostatistics Program, Fred Hutchinson Cancer Center, Seattle, Washington, United States of America","Department of Biostatistics, Johns Hopkins University, Baltimore, Maryland, United States of America"],"affiliations":[{"raw_affiliation_string":"Biostatistics Program, Fred Hutchinson Cancer Center, Seattle, Washington, United States of America","institution_ids":["https://openalex.org/I4210089486"]},{"raw_affiliation_string":"Department of Biostatistics, Johns Hopkins University, Baltimore, Maryland, United States of America","institution_ids":["https://openalex.org/I145311948"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5087555123"],"corresponding_institution_ids":["https://openalex.org/I145311948","https://openalex.org/I4210089486"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":1.4477,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.80788031,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":99},"biblio":{"volume":"20","issue":"5","first_page":"e1012018","last_page":"e1012018"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11875","display_name":"Statistics Education and Methodologies","score":0.925000011920929,"subfield":{"id":"https://openalex.org/subfields/2613","display_name":"Statistics and Probability"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11875","display_name":"Statistics Education and Methodologies","score":0.925000011920929,"subfield":{"id":"https://openalex.org/subfields/2613","display_name":"Statistics and Probability"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13398","display_name":"Data Analysis with R","score":0.9182999730110168,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/simple","display_name":"Simple (philosophy)","score":0.8014928102493286},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.462864488363266},{"id":"https://openalex.org/keywords/mathematics-education","display_name":"Mathematics education","score":0.44315841794013977},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.2414119839668274},{"id":"https://openalex.org/keywords/philosophy","display_name":"Philosophy","score":0.1274929642677307},{"id":"https://openalex.org/keywords/epistemology","display_name":"Epistemology","score":0.10071456432342529}],"concepts":[{"id":"https://openalex.org/C2780586882","wikidata":"https://www.wikidata.org/wiki/Q7520643","display_name":"Simple (philosophy)","level":2,"score":0.8014928102493286},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.462864488363266},{"id":"https://openalex.org/C145420912","wikidata":"https://www.wikidata.org/wiki/Q853077","display_name":"Mathematics education","level":1,"score":0.44315841794013977},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.2414119839668274},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.1274929642677307},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.10071456432342529}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013663","descriptor_name":"Teaching","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013663","descriptor_name":"Teaching","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013663","descriptor_name":"Teaching","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013663","descriptor_name":"Teaching","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013663","descriptor_name":"Teaching","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000193","qualifier_name":"education","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000193","qualifier_name":"education","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000193","qualifier_name":"education","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000193","qualifier_name":"education","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000193","qualifier_name":"education","is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1371/journal.pcbi.1012018","is_oa":true,"landing_page_url":"http://dx.doi.org/10.1371/journal.pcbi.1012018","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1012018&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:38753606","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38753606","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11098303","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11098303","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11098303/pdf/pcbi.1012018.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:784cdf8a6a0c4795891e288dbb338b2c","is_oa":true,"landing_page_url":"https://doaj.org/article/784cdf8a6a0c4795891e288dbb338b2c","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 20, Iss 5, p e1012018 (2024)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1012018","is_oa":true,"landing_page_url":"http://dx.doi.org/10.1371/journal.pcbi.1012018","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1012018&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.5400000214576721,"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education"}],"awards":[{"id":"https://openalex.org/G5127613922","display_name":null,"funder_award_id":"Paid per course","funder_id":"https://openalex.org/F4320333323","funder_display_name":"University of Washington College of Arts and Sciences"},{"id":"https://openalex.org/G5945343061","display_name":null,"funder_award_id":"Paid per course","funder_id":"https://openalex.org/F4320332669","funder_display_name":"Johns Hopkins Bloomberg School of Public Health"}],"funders":[{"id":"https://openalex.org/F4320310145","display_name":"Johns Hopkins University","ror":"https://ror.org/00za53h95"},{"id":"https://openalex.org/F4320332669","display_name":"Johns Hopkins Bloomberg School of Public Health","ror":"https://ror.org/00za53h95"},{"id":"https://openalex.org/F4320333323","display_name":"University of Washington College of Arts and Sciences","ror":null}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4396949320.pdf"},"referenced_works_count":32,"referenced_works":["https://openalex.org/W2015288798","https://openalex.org/W2088952787","https://openalex.org/W2121473846","https://openalex.org/W2555266920","https://openalex.org/W2618945821","https://openalex.org/W2793383545","https://openalex.org/W2795628086","https://openalex.org/W2900676091","https://openalex.org/W2922905981","https://openalex.org/W2929544985","https://openalex.org/W3040901374","https://openalex.org/W3085335991","https://openalex.org/W3108199315","https://openalex.org/W3192696361","https://openalex.org/W4213054221","https://openalex.org/W4221136380","https://openalex.org/W4221164019","https://openalex.org/W4293860390","https://openalex.org/W4294044337","https://openalex.org/W4306803545","https://openalex.org/W4313492259","https://openalex.org/W4316829762","https://openalex.org/W4317820140","https://openalex.org/W4322627501","https://openalex.org/W4327914827","https://openalex.org/W4376167430","https://openalex.org/W4387140565","https://openalex.org/W4399639949","https://openalex.org/W4401785773","https://openalex.org/W4401883308","https://openalex.org/W6799856356","https://openalex.org/W7057119852"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2748952813","https://openalex.org/W1585007175","https://openalex.org/W2382521049","https://openalex.org/W2390279801","https://openalex.org/W2144385241","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890"],"abstract_inverted_index":{"The":[0],"demand":[1,25,83],"for":[2,69,84,164,347,393],"data":[3,95,149],"science":[4,96,150,223],"skills":[5,86],"across":[6,167],"disciplines":[7],"has":[8,93],"led":[9],"to":[10,32,80,130,139,152,174,185,268,285,358,390],"massive":[11],"growth":[12],"of":[13,77,105,119,156,207,211,275,280,296,309,336],"data-related":[14],"programs":[15],"in":[16,143,306,339],"universities,":[17],"standalone":[18],"courses,":[19],"and":[20,41,103,118,128,147,169,198,213,225,230,259,261,286,291,304,362,377,398],"other":[21,50,293],"learning":[22,46,337],"materials":[23,107,166],"[1].While":[24],"is":[26,313],"high,":[27],"program":[28],"administrators":[29],"often":[30,57,226],"struggle":[31],"find":[33],"instructors":[34,74,175],"[2].Many":[35],"learners":[36,218,265,394],"end":[37,58],"up":[38,59],"teaching":[39,60,178,243],"themselves":[40],"climbing":[42],"a":[43,140,221,344,404],"very":[44],"steep":[45],"curve":[47],"[3].On":[48],"the":[49,78,82,100,186,278,307,329,383],"hand,":[51],"scientists":[52],"with":[53,61,177],"deep":[54,310],"research":[55],"backgrounds":[56],"little":[62],"experience":[63],"or":[64,321],"guidance.We":[65],"believe":[66],"better":[67,359],"resources":[68,134],"busy":[70],"and/or":[71],"less":[72],"experienced":[73],"are":[75,266,326,353],"part":[76],"solution":[79],"meeting":[81],"programming":[85,121],"education.The":[87],"Open":[88],"Educational":[89],"Resources":[90],"(OER)":[91],"movement":[92],"propelled":[94],"forward":[97],"by":[98,395],"improving":[99],"quality,":[101],"depth,":[102],"availability":[104],"free":[106],"[4].This":[108],"includes":[109],"textbooks,":[110],"tutorials,":[111],"vignettes,":[112],"datasets,":[113],"software":[114],"tools,":[115],"case":[116],"studies,":[117],"course,":[120],"courses.Despite":[122],"ongoing":[123],"challenges,":[124],"such":[125,364],"as":[126,365],"awareness":[127],"access":[129],"computers,":[131],"democratizing":[132],"educational":[133],"makes":[135],"high-quality":[136],"content":[137],"available":[138],"global":[141],"audience.This":[142],"turn":[144],"nurtures":[145],"collaboration":[146],"innovation.As":[148],"continues":[151],"influence":[153],"all":[154],"aspects":[155],"our":[157,237,241],"lives,":[158],"we":[159,171,234,342],"must":[160],"consider":[161],"key":[162,238],"takeaways":[163],"adopting":[165],"classrooms":[168],"contexts.Here,":[170],"provide":[172],"guidance":[173,258],"tasked":[176],"beginner":[179],"level":[180],"programming,":[181],"specifically":[182],"an":[183],"introduction":[184],"R":[187,338,349],"language.Our":[188],"perspective":[189],"comes":[190],"from":[191,240],"co-teaching":[192],"over":[193],"300":[194],"professionals,":[195],"graduate":[196],"students,":[197],"undergraduate":[199],"interns":[200],"at":[201],"institutions":[202],"like":[203,283],"Johns":[204],"Hopkins":[205],"School":[206],"Public":[208],"Health,":[209],"University":[210],"Washington,":[212],"Fred":[214],"Hutchinson":[215],"Cancer":[216],"Center.Our":[217],"usually":[219],"lack":[220],"computer":[222],"background":[224],"juggle":[227],"full-time":[228],"employment":[229],"coursework.The":[231],"10":[232],"rules":[233,248],"present":[235,392],"distill":[236],"reflections":[239],"experiences":[242,361],"R.":[244],"We":[245],"hope":[246],"these":[247],"will":[249],"help":[250],"you":[251,325,385],"plan":[252],"your":[253,333],"course":[254,367],"structure,":[255],"incorporate":[256],"general":[257],"approaches,":[260],"understand":[262],"specific":[263],"pitfalls":[264],"likely":[267],"encounter.":[269],"Rule":[270],"1:":[271],"Make":[272],"it":[273],"intensiveMost":[274],"us":[276],"feel":[277],"strain":[279],"day-to-day":[281],"distractions":[282,352],"responding":[284],"reading":[287],"emails,":[288],"Slack":[289],"messages,":[290],"various":[292],"pings.These":[294],"forms":[295],"communication,":[297],"while":[298],"(probably)":[299],"important,":[300],"can":[301,318,356],"be":[302,319],"distracting":[303],"get":[305],"way":[308],"work":[311],"[5].Programming":[312],"about":[314,328],"problem":[315],"solving,":[316],"which":[317],"frustrating":[320],"even":[322],"impossible":[323],"if":[324],"thinking":[327],"next":[330],"task":[331],"on":[332],"to-do":[334],"list.Instead":[335],"small":[340],"chunks,":[341],"suggest":[343],"condensed":[345,405],"format":[346],"introducing":[348],"where":[350,401],"learners'":[351],"minimized.Intensive":[354],"courses":[355],"lead":[357],"learner":[360],"outcomes,":[363],"greater":[366,378],"effectiveness":[368],"[6],":[369],"lower":[370],"perceived":[371],"stress":[372],"[7],":[373],"improved":[374],"focus":[375],"[7,8],":[376],"student":[379],"success":[380],"rates":[381],"[8].As":[382],"instructor,":[384],"should":[386],"also":[387],"fully":[388],"commit":[389],"being":[391],"minimizing":[396],"meetings":[397],"unrelated":[399],"correspondence":[400],"possible":[402],"during":[403],"course.":[406]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
