{"id":"https://openalex.org/W4388018061","doi":"https://doi.org/10.1371/journal.pcbi.1011584","title":"Deep convolutional and conditional neural networks for large-scale genomic data generation","display_name":"Deep convolutional and conditional neural networks for large-scale genomic data generation","publication_year":2023,"publication_date":"2023-10-30","ids":{"openalex":"https://openalex.org/W4388018061","doi":"https://doi.org/10.1371/journal.pcbi.1011584","pmid":"https://pubmed.ncbi.nlm.nih.gov/37903158"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1011584","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1011584","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1011584&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1011584&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5000712256","display_name":"Burak Yelmen","orcid":"https://orcid.org/0000-0003-0731-0223"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en sciences et technologies du num\u00e9rique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"government","lineage":["https://openalex.org/I1326498283"]},{"id":"https://openalex.org/I277688954","display_name":"Universit\u00e9 Paris-Saclay","ror":"https://ror.org/03xjwb503","country_code":"FR","type":"education","lineage":["https://openalex.org/I277688954"]},{"id":"https://openalex.org/I56085075","display_name":"University of Tartu","ror":"https://ror.org/03z77qz90","country_code":"EE","type":"education","lineage":["https://openalex.org/I56085075"]}],"countries":["EE","FR"],"is_corresponding":true,"raw_author_name":"Burak Yelmen","raw_affiliation_strings":["University of Tartu, Institute of Genomics, Tartu, Estonia","Universit\u00e9 Paris-Saclay, CNRS, INRIA, LISN, Paris, France"],"raw_orcid":"https://orcid.org/0000-0003-0731-0223","affiliations":[{"raw_affiliation_string":"University of Tartu, Institute of Genomics, Tartu, Estonia","institution_ids":["https://openalex.org/I56085075"]},{"raw_affiliation_string":"Universit\u00e9 Paris-Saclay, CNRS, INRIA, LISN, Paris, France","institution_ids":["https://openalex.org/I277688954","https://openalex.org/I1326498283","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057697784","display_name":"Aur\u00e9lien Decelle","orcid":"https://orcid.org/0000-0002-3017-0858"},"institutions":[{"id":"https://openalex.org/I121748325","display_name":"Universidad Complutense de Madrid","ror":"https://ror.org/02p0gd045","country_code":"ES","type":"education","lineage":["https://openalex.org/I121748325"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en sciences et technologies du num\u00e9rique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"government","lineage":["https://openalex.org/I1326498283"]},{"id":"https://openalex.org/I277688954","display_name":"Universit\u00e9 Paris-Saclay","ror":"https://ror.org/03xjwb503","country_code":"FR","type":"education","lineage":["https://openalex.org/I277688954"]}],"countries":["ES","FR"],"is_corresponding":true,"raw_author_name":"Aur\u00e9lien Decelle","raw_affiliation_strings":["Universidad Complutense de Madrid, Departamento de F\u00edsica Te\u00f3rica, Madrid, Spain","Universit\u00e9 Paris-Saclay, CNRS, INRIA, LISN, Paris, France"],"raw_orcid":"https://orcid.org/0000-0002-3017-0858","affiliations":[{"raw_affiliation_string":"Universidad Complutense de Madrid, Departamento de F\u00edsica Te\u00f3rica, Madrid, Spain","institution_ids":["https://openalex.org/I121748325"]},{"raw_affiliation_string":"Universit\u00e9 Paris-Saclay, CNRS, INRIA, LISN, Paris, France","institution_ids":["https://openalex.org/I277688954","https://openalex.org/I1326498283","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021557158","display_name":"Leila Lea Boulos","orcid":null},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en sciences et technologies du num\u00e9rique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"government","lineage":["https://openalex.org/I1326498283"]},{"id":"https://openalex.org/I277688954","display_name":"Universit\u00e9 Paris-Saclay","ror":"https://ror.org/03xjwb503","country_code":"FR","type":"education","lineage":["https://openalex.org/I277688954"]},{"id":"https://openalex.org/I88467170","display_name":"Universit\u00e9 d'\u00c9vry Val-d'Essonne","ror":"https://ror.org/00e96v939","country_code":"FR","type":"education","lineage":["https://openalex.org/I277688954","https://openalex.org/I88467170"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Leila Lea Boulos","raw_affiliation_strings":["Universit\u00e9 Paris-Saclay, CNRS, INRIA, LISN, Paris, France","Universit\u00e9 d'\u00c9vry Val-d'Essonne, \u00c9vry-Courcouronnes, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universit\u00e9 Paris-Saclay, CNRS, INRIA, LISN, Paris, France","institution_ids":["https://openalex.org/I277688954","https://openalex.org/I1326498283","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"Universit\u00e9 d'\u00c9vry Val-d'Essonne, \u00c9vry-Courcouronnes, France","institution_ids":["https://openalex.org/I88467170"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017970248","display_name":"Antoine Szatkownik","orcid":null},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en sciences et technologies du num\u00e9rique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"government","lineage":["https://openalex.org/I1326498283"]},{"id":"https://openalex.org/I277688954","display_name":"Universit\u00e9 Paris-Saclay","ror":"https://ror.org/03xjwb503","country_code":"FR","type":"education","lineage":["https://openalex.org/I277688954"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Antoine Szatkownik","raw_affiliation_strings":["Universit\u00e9 Paris-Saclay, CNRS, INRIA, LISN, Paris, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universit\u00e9 Paris-Saclay, CNRS, INRIA, LISN, Paris, France","institution_ids":["https://openalex.org/I277688954","https://openalex.org/I1326498283","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001525923","display_name":"Cyril Furtlehner","orcid":"https://orcid.org/0000-0002-3986-2076"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en sciences et technologies du num\u00e9rique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"government","lineage":["https://openalex.org/I1326498283"]},{"id":"https://openalex.org/I277688954","display_name":"Universit\u00e9 Paris-Saclay","ror":"https://ror.org/03xjwb503","country_code":"FR","type":"education","lineage":["https://openalex.org/I277688954"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Cyril Furtlehner","raw_affiliation_strings":["Universit\u00e9 Paris-Saclay, CNRS, INRIA, LISN, Paris, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universit\u00e9 Paris-Saclay, CNRS, INRIA, LISN, Paris, France","institution_ids":["https://openalex.org/I277688954","https://openalex.org/I1326498283","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021255142","display_name":"Guillaume Charpiat","orcid":"https://orcid.org/0009-0003-6000-9410"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en sciences et technologies du num\u00e9rique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"government","lineage":["https://openalex.org/I1326498283"]},{"id":"https://openalex.org/I277688954","display_name":"Universit\u00e9 Paris-Saclay","ror":"https://ror.org/03xjwb503","country_code":"FR","type":"education","lineage":["https://openalex.org/I277688954"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Guillaume Charpiat","raw_affiliation_strings":["Universit\u00e9 Paris-Saclay, CNRS, INRIA, LISN, Paris, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universit\u00e9 Paris-Saclay, CNRS, INRIA, LISN, Paris, France","institution_ids":["https://openalex.org/I277688954","https://openalex.org/I1326498283","https://openalex.org/I1294671590"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5055580374","display_name":"Flora Jay","orcid":"https://orcid.org/0000-0001-5884-4730"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en sciences et technologies du num\u00e9rique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"government","lineage":["https://openalex.org/I1326498283"]},{"id":"https://openalex.org/I277688954","display_name":"Universit\u00e9 Paris-Saclay","ror":"https://ror.org/03xjwb503","country_code":"FR","type":"education","lineage":["https://openalex.org/I277688954"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Flora Jay","raw_affiliation_strings":["Universit\u00e9 Paris-Saclay, CNRS, INRIA, LISN, Paris, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universit\u00e9 Paris-Saclay, CNRS, INRIA, LISN, Paris, France","institution_ids":["https://openalex.org/I277688954","https://openalex.org/I1326498283","https://openalex.org/I1294671590"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5000712256","https://openalex.org/A5001525923","https://openalex.org/A5017970248","https://openalex.org/A5021255142","https://openalex.org/A5021557158","https://openalex.org/A5055580374","https://openalex.org/A5057697784"],"corresponding_institution_ids":["https://openalex.org/I121748325","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I277688954","https://openalex.org/I56085075","https://openalex.org/I88467170"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":2.9525,"has_fulltext":true,"cited_by_count":20,"citation_normalized_percentile":{"value":0.91470731,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":100},"biblio":{"volume":"19","issue":"10","first_page":"e1011584","last_page":"e1011584"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10269","display_name":"Epigenetics and DNA Methylation","score":0.9929999709129333,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10269","display_name":"Epigenetics and DNA Methylation","score":0.9929999709129333,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9555000066757202,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10751","display_name":"Forensic and Genetic Research","score":0.9266999959945679,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.635967493057251},{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.5914628505706787},{"id":"https://openalex.org/keywords/generative-model","display_name":"Generative model","score":0.5408786535263062},{"id":"https://openalex.org/keywords/convolutional-neural-network","display_name":"Convolutional neural network","score":0.498629093170166},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4690307378768921},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.4414554834365845},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.4123459756374359},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.378118634223938},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.37452125549316406},{"id":"https://openalex.org/keywords/generative-grammar","display_name":"Generative grammar","score":0.23986470699310303},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2382746934890747},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.19198128581047058}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.635967493057251},{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.5914628505706787},{"id":"https://openalex.org/C167966045","wikidata":"https://www.wikidata.org/wiki/Q5532625","display_name":"Generative model","level":3,"score":0.5408786535263062},{"id":"https://openalex.org/C81363708","wikidata":"https://www.wikidata.org/wiki/Q17084460","display_name":"Convolutional neural network","level":2,"score":0.498629093170166},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4690307378768921},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.4414554834365845},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.4123459756374359},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.378118634223938},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.37452125549316406},{"id":"https://openalex.org/C39890363","wikidata":"https://www.wikidata.org/wiki/Q36108","display_name":"Generative grammar","level":2,"score":0.23986470699310303},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2382746934890747},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.19198128581047058},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D006239","descriptor_name":"Haplotypes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006239","descriptor_name":"Haplotypes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006239","descriptor_name":"Haplotypes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006239","descriptor_name":"Haplotypes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007858","descriptor_name":"Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007858","descriptor_name":"Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007858","descriptor_name":"Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007858","descriptor_name":"Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1371/journal.pcbi.1011584","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1011584","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1011584&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:37903158","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37903158","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10635570","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10635570","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10635570/pdf/pcbi.1011584.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"},{"id":"pmh:oai:RePEc:plo:pcbi00:1011584","is_oa":false,"landing_page_url":"https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1011584","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},{"id":"pmh:oai:doaj.org/article:dde2f445990c43898e5886eb5b1f36e0","is_oa":true,"landing_page_url":"https://doaj.org/article/dde2f445990c43898e5886eb5b1f36e0","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 19, Iss 10, p e1011584 (2023)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1011584","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1011584","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1011584&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1048083284","display_name":null,"funder_award_id":"Refs. 2019-T1/TIC-13298","funder_id":"https://openalex.org/F4320313831","funder_display_name":"Comunidad de Madrid"},{"id":"https://openalex.org/G14800004","display_name":null,"funder_award_id":"PR44/21-29937","funder_id":"https://openalex.org/F4320321585","funder_display_name":"Universidad Complutense de Madrid"},{"id":"https://openalex.org/G1635388603","display_name":null,"funder_award_id":"PID2021-125506NA-I00","funder_id":"https://openalex.org/F4320335322","funder_display_name":"European Regional Development Fund"},{"id":"https://openalex.org/G2539398544","display_name":null,"funder_award_id":"PR44/21","funder_id":"https://openalex.org/F4320312331","funder_display_name":"Banco Santander"},{"id":"https://openalex.org/G2875348234","display_name":null,"funder_award_id":"ANR-11-LABEX-0045-DIGICOSME","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G3024506935","display_name":null,"funder_award_id":"ANR-11-IDEX-0003","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G3500656217","display_name":"Robust Deep Learning for Artificial Genomics and Population Genetics","funder_award_id":"ANR-20-CE45-0010","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G4189087860","display_name":null,"funder_award_id":"ANR-11-IDEX-0003-02","funder_id":"https://openalex.org/F4320324252","funder_display_name":"Universit\u00e9 Paris-Saclay"},{"id":"https://openalex.org/G4585338298","display_name":null,"funder_award_id":"11-IDEX-0003-02","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G4866930200","display_name":null,"funder_award_id":"ANR-11-IDEX","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G6187605657","display_name":null,"funder_award_id":"ANR-11-IDEX-0003-02","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G662364989","display_name":null,"funder_award_id":"PR44/21-29937","funder_id":"https://openalex.org/F4320312331","funder_display_name":"Banco Santander"},{"id":"https://openalex.org/G6690900585","display_name":null,"funder_award_id":"ANR-11-IDEX-0003","funder_id":"https://openalex.org/F4320324252","funder_display_name":"Universit\u00e9 Paris-Saclay"},{"id":"https://openalex.org/G966645571","display_name":null,"funder_award_id":"ANR-20-CE45-0010-01 RoDAPoG","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"}],"funders":[{"id":"https://openalex.org/F4320312331","display_name":"Banco Santander","ror":"https://ror.org/017d1hs72"},{"id":"https://openalex.org/F4320313831","display_name":"Comunidad de Madrid","ror":null},{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320320883","display_name":"Agence Nationale de la Recherche","ror":"https://ror.org/00rbzpz17"},{"id":"https://openalex.org/F4320321585","display_name":"Universidad Complutense de Madrid","ror":"https://ror.org/02p0gd045"},{"id":"https://openalex.org/F4320324252","display_name":"Universit\u00e9 Paris-Saclay","ror":"https://ror.org/03xjwb503"},{"id":"https://openalex.org/F4320324717","display_name":"Tartu \u00dclikool","ror":"https://ror.org/03z77qz90"},{"id":"https://openalex.org/F4320335322","display_name":"European Regional Development Fund","ror":"https://ror.org/00k4n6c32"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4388018061.pdf","grobid_xml":"https://content.openalex.org/works/W4388018061.grobid-xml"},"referenced_works_count":42,"referenced_works":["https://openalex.org/W2104549677","https://openalex.org/W2116064496","https://openalex.org/W2161459805","https://openalex.org/W2194775991","https://openalex.org/W2755930219","https://openalex.org/W2781256610","https://openalex.org/W2887995258","https://openalex.org/W2912083425","https://openalex.org/W2946488372","https://openalex.org/W2962770929","https://openalex.org/W2963248348","https://openalex.org/W2970971581","https://openalex.org/W2990138404","https://openalex.org/W2998859599","https://openalex.org/W3003038010","https://openalex.org/W3003301247","https://openalex.org/W3014974815","https://openalex.org/W3015471667","https://openalex.org/W3016610742","https://openalex.org/W3042023486","https://openalex.org/W3096110808","https://openalex.org/W3112701542","https://openalex.org/W3121327189","https://openalex.org/W3127763315","https://openalex.org/W3136528618","https://openalex.org/W3204708585","https://openalex.org/W3206907907","https://openalex.org/W4206172335","https://openalex.org/W4212774754","https://openalex.org/W4220843674","https://openalex.org/W4226348722","https://openalex.org/W4283454122","https://openalex.org/W4288421622","https://openalex.org/W4294975636","https://openalex.org/W4301178504","https://openalex.org/W4309473116","https://openalex.org/W4317776703","https://openalex.org/W4366083659","https://openalex.org/W4367836877","https://openalex.org/W4383557880","https://openalex.org/W6637568146","https://openalex.org/W6849182375"],"related_works":["https://openalex.org/W2389214306","https://openalex.org/W4293226380","https://openalex.org/W4235240664","https://openalex.org/W2965083567","https://openalex.org/W1838576100","https://openalex.org/W2095886385","https://openalex.org/W2889616422","https://openalex.org/W2089704382","https://openalex.org/W1983399550","https://openalex.org/W97075385"],"abstract_inverted_index":{"Applications":[0],"of":[1,24,62,78,88,130,148,160,167,178,210,246,265],"generative":[2,37,197],"models":[3,80],"for":[4,116,186,191],"genomic":[5,25,192,256],"data":[6,20,90,193,257],"have":[7],"gained":[8],"significant":[9],"momentum":[10],"in":[11,133,228,263],"the":[12,59,84,127,141,158,165,172,176,184,218,222],"past":[13],"few":[14],"years,":[15],"with":[16,109,119,225,254],"scopes":[17],"ranging":[18],"from":[19,171,217],"characterization":[21],"to":[22,49,135,155,200,241,251],"generation":[23],"segments":[26,205],"and":[27,41,71,143,164,231],"functional":[28],"sequences.":[29],"In":[30,221],"our":[31],"previous":[32],"study,":[33],"we":[34,99],"demonstrated":[35],"that":[36],"adversarial":[38],"networks":[39,124,199],"(GANs)":[40],"restricted":[42],"Boltzmann":[43],"machines":[44],"(RBMs)":[45],"can":[46,57,238],"be":[47,239],"used":[48,196],"create":[50,201],"novel":[51,102,111],"high-quality":[52],"artificial":[53,203,235],"genomes":[54,64,212],"(AGs)":[55],"which":[56,206],"preserve":[58],"complex":[60,137],"characteristics":[61,209],"real":[63,211,247],"such":[65],"as":[66],"population":[67],"structure,":[68],"linkage":[69],"disequilibrium":[70],"selection":[72],"signals.":[73],"However,":[74],"a":[75,101,110,145,259],"major":[76],"drawback":[77],"these":[79,161],"is":[81],"scalability,":[82],"since":[83],"large":[85,202],"feature":[86],"space":[87],"genome-wide":[89],"increases":[91],"computational":[92],"complexity":[93],"vastly.":[94],"To":[95],"address":[96],"this":[97],"issue,":[98],"implemented":[100],"convolutional":[103],"Wasserstein":[104],"GAN":[105],"(WGAN)":[106],"model":[107],"along":[108,140],"conditional":[112],"RBM":[113],"(CRBM)":[114],"framework":[115,262],"generating":[117],"AGs":[118],"high":[120],"SNP":[121],"number.":[122],"These":[123],"implicitly":[125],"learn":[126],"varying":[128],"landscape":[129],"haplotypic":[131],"structure":[132],"order":[134],"capture":[136],"correlation":[138],"patterns":[139],"genome":[142,204,236],"generate":[144],"wide":[146],"diversity":[147],"plausible":[149],"haplotypes.":[150],"We":[151,195],"performed":[152],"comparative":[153],"analyses":[154],"assess":[156],"both":[157],"quality":[159,230],"generated":[162],"haplotypes":[163],"amount":[166],"possible":[168],"privacy":[169,180,188,215,232],"leakage":[170,216],"training":[173,219],"data.":[174],"As":[175],"importance":[177],"genetic":[179],"becomes":[181],"more":[182],"prevalent,":[183],"need":[185],"effective":[187],"protection":[189],"measures":[190],"increases.":[194],"neural":[198],"possess":[207],"many":[208],"without":[213],"substantial":[214],"dataset.":[220],"near":[223],"future,":[224],"further":[226],"improvements":[227],"haplotype":[229],"preservation,":[233],"large-scale":[234],"databases":[237],"assembled":[240],"provide":[242],"easily":[243],"accessible":[244],"surrogates":[245],"databases,":[248],"allowing":[249],"researchers":[250],"conduct":[252],"studies":[253],"diverse":[255],"within":[258],"safe":[260],"ethical":[261],"terms":[264],"donor":[266],"privacy.":[267]},"counts_by_year":[{"year":2025,"cited_by_count":13},{"year":2024,"cited_by_count":7}],"updated_date":"2026-05-09T13:55:54.758798","created_date":"2025-10-10T00:00:00"}
