{"id":"https://openalex.org/W4386825705","doi":"https://doi.org/10.1371/journal.pcbi.1011463","title":"Nowcasting the 2022 mpox outbreak in England","display_name":"Nowcasting the 2022 mpox outbreak in England","publication_year":2023,"publication_date":"2023-09-18","ids":{"openalex":"https://openalex.org/W4386825705","doi":"https://doi.org/10.1371/journal.pcbi.1011463","pmid":"https://pubmed.ncbi.nlm.nih.gov/37721951"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1011463","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1011463","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1371/journal.pcbi.1011463","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5059407270","display_name":"Christopher E. Overton","orcid":"https://orcid.org/0000-0002-8433-4010"},"institutions":[{"id":"https://openalex.org/I146655781","display_name":"University of Liverpool","ror":"https://ror.org/04xs57h96","country_code":"GB","type":"education","lineage":["https://openalex.org/I146655781"]},{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]},{"id":"https://openalex.org/I4387153084","display_name":"UK Health Security Agency","ror":"https://ror.org/018h10037","country_code":"GB","type":"government","lineage":["https://openalex.org/I1311074006","https://openalex.org/I4387153084"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Christopher E. Overton","raw_affiliation_strings":["Department of Mathematical Sciences, University of Liverpool, Liverpool, United Kingdom","Department of Mathematics, University of Manchester, Manchester, United Kingdom","UK Health Security Agency, Data Science and Analytics, London, United Kingdom"],"raw_orcid":"https://orcid.org/0000-0002-8433-4010","affiliations":[{"raw_affiliation_string":"Department of Mathematical Sciences, University of Liverpool, Liverpool, United Kingdom","institution_ids":["https://openalex.org/I146655781"]},{"raw_affiliation_string":"Department of Mathematics, University of Manchester, Manchester, United Kingdom","institution_ids":["https://openalex.org/I28407311"]},{"raw_affiliation_string":"UK Health Security Agency, Data Science and Analytics, London, United Kingdom","institution_ids":["https://openalex.org/I4387153084"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083613572","display_name":"Sam Abbott","orcid":"https://orcid.org/0000-0001-8057-8037"},"institutions":[{"id":"https://openalex.org/I4210089966","display_name":"London School of Hygiene & Tropical Medicine","ror":"https://ror.org/00a0jsq62","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I4210089966"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Sam Abbott","raw_affiliation_strings":["London School of Hygiene and Tropical Medicine, London, United Kingdom"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"London School of Hygiene and Tropical Medicine, London, United Kingdom","institution_ids":["https://openalex.org/I4210089966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108817822","display_name":"Rachel Christie","orcid":"https://orcid.org/0009-0009-3071-3259"},"institutions":[{"id":"https://openalex.org/I4387153084","display_name":"UK Health Security Agency","ror":"https://ror.org/018h10037","country_code":"GB","type":"government","lineage":["https://openalex.org/I1311074006","https://openalex.org/I4387153084"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Rachel Christie","raw_affiliation_strings":["UK Health Security Agency, Data Science and Analytics, London, United Kingdom"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"UK Health Security Agency, Data Science and Analytics, London, United Kingdom","institution_ids":["https://openalex.org/I4387153084"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050166983","display_name":"Fergus Cumming","orcid":"https://orcid.org/0000-0002-6795-9107"},"institutions":[{"id":"https://openalex.org/I4387153084","display_name":"UK Health Security Agency","ror":"https://ror.org/018h10037","country_code":"GB","type":"government","lineage":["https://openalex.org/I1311074006","https://openalex.org/I4387153084"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Fergus Cumming","raw_affiliation_strings":["UK Health Security Agency, Data Science and Analytics, London, United Kingdom"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"UK Health Security Agency, Data Science and Analytics, London, United Kingdom","institution_ids":["https://openalex.org/I4387153084"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035403844","display_name":"Julie Day","orcid":"https://orcid.org/0000-0003-1035-2117"},"institutions":[{"id":"https://openalex.org/I4387153084","display_name":"UK Health Security Agency","ror":"https://ror.org/018h10037","country_code":"GB","type":"government","lineage":["https://openalex.org/I1311074006","https://openalex.org/I4387153084"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Julie Day","raw_affiliation_strings":["UK Health Security Agency, Data Science and Analytics, London, United Kingdom"],"raw_orcid":"https://orcid.org/0000-0003-1035-2117","affiliations":[{"raw_affiliation_string":"UK Health Security Agency, Data Science and Analytics, London, United Kingdom","institution_ids":["https://openalex.org/I4387153084"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101760644","display_name":"Owen Jones","orcid":"https://orcid.org/0000-0002-8410-9585"},"institutions":[{"id":"https://openalex.org/I4387153084","display_name":"UK Health Security Agency","ror":"https://ror.org/018h10037","country_code":"GB","type":"government","lineage":["https://openalex.org/I1311074006","https://openalex.org/I4387153084"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Owen Jones","raw_affiliation_strings":["UK Health Security Agency, Data Science and Analytics, London, United Kingdom"],"raw_orcid":"https://orcid.org/0000-0002-8410-9585","affiliations":[{"raw_affiliation_string":"UK Health Security Agency, Data Science and Analytics, London, United Kingdom","institution_ids":["https://openalex.org/I4387153084"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103461221","display_name":"Rob Paton","orcid":null},"institutions":[{"id":"https://openalex.org/I4387153084","display_name":"UK Health Security Agency","ror":"https://ror.org/018h10037","country_code":"GB","type":"government","lineage":["https://openalex.org/I1311074006","https://openalex.org/I4387153084"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Rob Paton","raw_affiliation_strings":["UK Health Security Agency, Data Science and Analytics, London, United Kingdom"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"UK Health Security Agency, Data Science and Analytics, London, United Kingdom","institution_ids":["https://openalex.org/I4387153084"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110227776","display_name":"Charlie Turner","orcid":null},"institutions":[{"id":"https://openalex.org/I4387153084","display_name":"UK Health Security Agency","ror":"https://ror.org/018h10037","country_code":"GB","type":"government","lineage":["https://openalex.org/I1311074006","https://openalex.org/I4387153084"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Charlie Turner","raw_affiliation_strings":["UK Health Security Agency, Mpox Data, Epi and Analytics Cell, London, United Kingdom"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"UK Health Security Agency, Mpox Data, Epi and Analytics Cell, London, United Kingdom","institution_ids":["https://openalex.org/I4387153084"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5057806953","display_name":"Thomas R. Ward","orcid":"https://orcid.org/0000-0001-8602-5468"},"institutions":[{"id":"https://openalex.org/I4387153084","display_name":"UK Health Security Agency","ror":"https://ror.org/018h10037","country_code":"GB","type":"government","lineage":["https://openalex.org/I1311074006","https://openalex.org/I4387153084"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Thomas Ward","raw_affiliation_strings":["UK Health Security Agency, Data Science and Analytics, London, United Kingdom"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"UK Health Security Agency, Data Science and Analytics, London, United Kingdom","institution_ids":["https://openalex.org/I4387153084"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5035403844","https://openalex.org/A5050166983","https://openalex.org/A5057806953","https://openalex.org/A5059407270","https://openalex.org/A5083613572","https://openalex.org/A5101760644","https://openalex.org/A5103461221","https://openalex.org/A5108817822","https://openalex.org/A5110227776"],"corresponding_institution_ids":["https://openalex.org/I146655781","https://openalex.org/I28407311","https://openalex.org/I4210089966","https://openalex.org/I4387153084"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":3.4165,"has_fulltext":true,"cited_by_count":25,"citation_normalized_percentile":{"value":0.9278607,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":97,"max":99},"biblio":{"volume":"19","issue":"9","first_page":"e1011463","last_page":"e1011463"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11767","display_name":"Poxvirus research and outbreaks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/2406","display_name":"Virology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11767","display_name":"Poxvirus research and outbreaks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/2406","display_name":"Virology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11515","display_name":"Bacillus and Francisella bacterial research","score":0.9941999912261963,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12492","display_name":"Zoonotic diseases and public health","score":0.9886999726295471,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/nowcasting","display_name":"Nowcasting","score":0.9376325011253357},{"id":"https://openalex.org/keywords/outbreak","display_name":"Outbreak","score":0.8184804916381836},{"id":"https://openalex.org/keywords/pandemic","display_name":"Pandemic","score":0.6780393123626709},{"id":"https://openalex.org/keywords/coronavirus-disease-2019","display_name":"Coronavirus disease 2019 (COVID-19)","score":0.5894615650177002},{"id":"https://openalex.org/keywords/geography","display_name":"Geography","score":0.5036467909812927},{"id":"https://openalex.org/keywords/robustness","display_name":"Robustness (evolution)","score":0.4767616391181946},{"id":"https://openalex.org/keywords/demography","display_name":"Demography","score":0.466695100069046},{"id":"https://openalex.org/keywords/quarter","display_name":"Quarter (Canadian coin)","score":0.4663708806037903},{"id":"https://openalex.org/keywords/epidemiology","display_name":"Epidemiology","score":0.44861969351768494},{"id":"https://openalex.org/keywords/flexibility","display_name":"Flexibility (engineering)","score":0.4143421947956085},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.4056289792060852},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3949340879917145},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.2519845962524414},{"id":"https://openalex.org/keywords/meteorology","display_name":"Meteorology","score":0.1537661850452423},{"id":"https://openalex.org/keywords/infectious-disease","display_name":"Infectious disease (medical specialty)","score":0.13765138387680054},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.12345650792121887},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.11736306548118591},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.10794425010681152},{"id":"https://openalex.org/keywords/sociology","display_name":"Sociology","score":0.09987577795982361},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.09311649203300476}],"concepts":[{"id":"https://openalex.org/C2781013037","wikidata":"https://www.wikidata.org/wiki/Q1433331","display_name":"Nowcasting","level":2,"score":0.9376325011253357},{"id":"https://openalex.org/C116675565","wikidata":"https://www.wikidata.org/wiki/Q3241045","display_name":"Outbreak","level":2,"score":0.8184804916381836},{"id":"https://openalex.org/C89623803","wikidata":"https://www.wikidata.org/wiki/Q12184","display_name":"Pandemic","level":5,"score":0.6780393123626709},{"id":"https://openalex.org/C3008058167","wikidata":"https://www.wikidata.org/wiki/Q84263196","display_name":"Coronavirus disease 2019 (COVID-19)","level":4,"score":0.5894615650177002},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.5036467909812927},{"id":"https://openalex.org/C63479239","wikidata":"https://www.wikidata.org/wiki/Q7353546","display_name":"Robustness (evolution)","level":3,"score":0.4767616391181946},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.466695100069046},{"id":"https://openalex.org/C85079727","wikidata":"https://www.wikidata.org/wiki/Q3560114","display_name":"Quarter (Canadian coin)","level":2,"score":0.4663708806037903},{"id":"https://openalex.org/C107130276","wikidata":"https://www.wikidata.org/wiki/Q133805","display_name":"Epidemiology","level":2,"score":0.44861969351768494},{"id":"https://openalex.org/C2780598303","wikidata":"https://www.wikidata.org/wiki/Q65921492","display_name":"Flexibility (engineering)","level":2,"score":0.4143421947956085},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.4056289792060852},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3949340879917145},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.2519845962524414},{"id":"https://openalex.org/C153294291","wikidata":"https://www.wikidata.org/wiki/Q25261","display_name":"Meteorology","level":1,"score":0.1537661850452423},{"id":"https://openalex.org/C524204448","wikidata":"https://www.wikidata.org/wiki/Q788926","display_name":"Infectious disease (medical specialty)","level":3,"score":0.13765138387680054},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.12345650792121887},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.11736306548118591},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.10794425010681152},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.09987577795982361},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.09311649203300476},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.0},{"id":"https://openalex.org/C166957645","wikidata":"https://www.wikidata.org/wiki/Q23498","display_name":"Archaeology","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000072339","descriptor_name":"Sexual and Gender Minorities","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000072339","descriptor_name":"Sexual and Gender Minorities","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000072339","descriptor_name":"Sexual and Gender Minorities","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000072339","descriptor_name":"Sexual and Gender Minorities","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000072339","descriptor_name":"Sexual and Gender Minorities","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000072339","descriptor_name":"Sexual and Gender Minorities","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000072339","descriptor_name":"Sexual and Gender Minorities","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":true},{"descriptor_ui":"D004196","descriptor_name":"Disease Outbreaks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004196","descriptor_name":"Disease Outbreaks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004196","descriptor_name":"Disease Outbreaks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004196","descriptor_name":"Disease Outbreaks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004196","descriptor_name":"Disease Outbreaks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004196","descriptor_name":"Disease Outbreaks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004196","descriptor_name":"Disease Outbreaks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004739","descriptor_name":"England","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D004739","descriptor_name":"England","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D004739","descriptor_name":"England","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D004739","descriptor_name":"England","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D004739","descriptor_name":"England","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D004739","descriptor_name":"England","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D004739","descriptor_name":"England","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018451","descriptor_name":"Homosexuality, Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018451","descriptor_name":"Homosexuality, Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018451","descriptor_name":"Homosexuality, Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018451","descriptor_name":"Homosexuality, Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018451","descriptor_name":"Homosexuality, Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018451","descriptor_name":"Homosexuality, Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018451","descriptor_name":"Homosexuality, Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D045908","descriptor_name":"Mpox (monkeypox)","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D045908","descriptor_name":"Mpox (monkeypox)","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D045908","descriptor_name":"Mpox, Monkeypox","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D045908","descriptor_name":"Mpox (monkeypox)","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D045908","descriptor_name":"Mpox, Monkeypox","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D045908","descriptor_name":"Mpox (monkeypox)","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D045908","descriptor_name":"Mpox, Monkeypox","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058873","descriptor_name":"Pandemics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058873","descriptor_name":"Pandemics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058873","descriptor_name":"Pandemics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058873","descriptor_name":"Pandemics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058873","descriptor_name":"Pandemics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058873","descriptor_name":"Pandemics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058873","descriptor_name":"Pandemics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1371/journal.pcbi.1011463","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1011463","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:37721951","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37721951","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:researchonline.lshtm.ac.uk:4680393","is_oa":false,"landing_page_url":"https://orcid.org/0000-0002-8433-4010>;","pdf_url":null,"source":{"id":"https://openalex.org/S4306402527","display_name":"LSHTM Research Online (London School of Hygiene and Tropical Medicine)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210089966","host_organization_name":"London School of Hygiene & Tropical Medicine","host_organization_lineage":["https://openalex.org/I4210089966"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":null,"raw_type":"PeerReviewed"},{"id":"pmh:oai:pubmedcentral.nih.gov:10538717","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10538717","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10538717/pdf/pcbi.1011463.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"},{"id":"pmh:oai:RePEc:plo:pcbi00:1011463","is_oa":false,"landing_page_url":"https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1011463","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},{"id":"pmh:oai:doaj.org/article:bb8558ce776b4a1a9ead6b60a74b9124","is_oa":true,"landing_page_url":"https://doaj.org/article/bb8558ce776b4a1a9ead6b60a74b9124","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 19, Iss 9, p e1011463 (2023)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1011463","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1011463","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.8600000143051147}],"awards":[{"id":"https://openalex.org/G2208160801","display_name":null,"funder_award_id":"210758/Z/18/Z","funder_id":"https://openalex.org/F4320311904","funder_display_name":"Wellcome Trust"},{"id":"https://openalex.org/G6888588356","display_name":"Real-time modelling for forecasts during infectious disease outbreaks","funder_award_id":"210758","funder_id":"https://openalex.org/F4320311904","funder_display_name":"Wellcome Trust"}],"funders":[{"id":"https://openalex.org/F4320311904","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":25,"referenced_works":["https://openalex.org/W1924589045","https://openalex.org/W2004384520","https://openalex.org/W2037511541","https://openalex.org/W2054270892","https://openalex.org/W2229697975","https://openalex.org/W2947802409","https://openalex.org/W2950881544","https://openalex.org/W3004912618","https://openalex.org/W3014092698","https://openalex.org/W3016587465","https://openalex.org/W3024468332","https://openalex.org/W3031381838","https://openalex.org/W3098773228","https://openalex.org/W3101060889","https://openalex.org/W3104962527","https://openalex.org/W3107976532","https://openalex.org/W3112717819","https://openalex.org/W3216894467","https://openalex.org/W4220907386","https://openalex.org/W4234185093","https://openalex.org/W4282965214","https://openalex.org/W4307977513","https://openalex.org/W4309905549","https://openalex.org/W4311827889","https://openalex.org/W6783656829"],"related_works":["https://openalex.org/W2098567841","https://openalex.org/W3124209601","https://openalex.org/W2238969010","https://openalex.org/W2189249776","https://openalex.org/W1526105959","https://openalex.org/W3193710367","https://openalex.org/W3122492506","https://openalex.org/W4388046081","https://openalex.org/W1778290058","https://openalex.org/W1166616657"],"abstract_inverted_index":{"In":[0],"May":[1],"2022,":[2],"a":[3,155],"cluster":[4],"of":[5,103,166,180,196,199,239,251],"mpox":[6,80,90,173],"cases":[7,37],"were":[8,73],"detected":[9],"in":[10,39,92,100,122,134,144,176,188,216,225,255],"the":[11,27,30,40,67,89,93,101,104,123,131,172,189,197,200,203,220,226,233,237,240,248,252],"UK":[12,94],"that":[13,162],"could":[14],"not":[15],"be":[16,230],"traced":[17],"to":[18,51,119,129,140,170,184,229],"recent":[19],"travel":[20],"history":[21],"from":[22,210],"an":[23],"endemic":[24],"region.":[25],"Over":[26],"coming":[28],"months,":[29],"outbreak":[31,91],"grew,":[32],"with":[33,64,213],"over":[34],"3000":[35],"total":[36],"reported":[38],"UK,":[41],"and":[42,58,75,108,192,218],"similar":[43],"outbreaks":[44,48],"occurring":[45],"worldwide.":[46],"These":[47,116],"appeared":[49],"linked":[50],"sexual":[52],"contact":[53],"networks":[54],"between":[55],"gay,":[56],"bisexual":[57],"other":[59],"men":[60],"who":[61],"have":[62,153],"sex":[63],"men.":[65],"Following":[66],"COVID-19":[68],"pandemic,":[69],"local":[70],"health":[71,86],"systems":[72],"strained,":[74],"therefore":[76],"effective":[77],"surveillance":[78],"for":[79,83,112,186],"was":[81,95],"essential":[82],"managing":[84],"public":[85],"policy.":[87],"However,":[88],"characterised":[96],"by":[97],"substantial":[98,120],"delays":[99,117],"reporting":[102,227],"symptom":[105],"onset":[106],"date":[107,111],"specimen":[109],"collection":[110],"confirmed":[113],"positive":[114],"cases.":[115],"led":[118],"backfilling":[121,187],"epidemic":[124,132,174,190,253],"curve,":[125],"making":[126],"it":[127],"challenging":[128],"interpret":[130],"trajectory":[133],"real-time.":[135],"Many":[136],"nowcasting":[137,156],"models":[138,161],"exist":[139],"tackle":[141],"this":[142,181],"challenge":[143],"epidemiological":[145],"data,":[146,221],"but":[147],"these":[148],"lacked":[149],"sufficient":[150],"flexibility.":[151],"We":[152],"developed":[154],"model":[157,182,208,245],"using":[158],"generalised":[159],"additive":[160],"makes":[163],"novel":[164],"use":[165],"individual-level":[167],"patient":[168],"data":[169],"correct":[171,185],"curve":[175,191,254],"England.":[177],"The":[178,243],"aim":[179],"is":[183],"provide":[193],"real-time":[194,204],"characteristics":[195],"state":[198],"epidemic,":[201],"including":[202],"growth":[205],"rate.":[206],"This":[207],"benefited":[209],"close":[211],"collaboration":[212],"individuals":[214],"involved":[215],"collecting":[217],"processing":[219],"enabling":[222],"temporal":[223],"changes":[224],"structure":[228],"built":[231],"into":[232],"model,":[234],"which":[235],"improved":[236],"robustness":[238],"nowcasts":[241],"generated.":[242],"resulting":[244],"accurately":[246],"captured":[247],"true":[249],"shape":[250],"real":[256],"time.":[257]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":9},{"year":2024,"cited_by_count":9},{"year":2023,"cited_by_count":4}],"updated_date":"2026-05-17T08:19:37.847499","created_date":"2025-10-10T00:00:00"}
