{"id":"https://openalex.org/W4386357177","doi":"https://doi.org/10.1371/journal.pcbi.1011383","title":"Dynamical modelling of viral infection and cooperative immune protection in COVID-19 patients","display_name":"Dynamical modelling of viral infection and cooperative immune protection in COVID-19 patients","publication_year":2023,"publication_date":"2023-09-01","ids":{"openalex":"https://openalex.org/W4386357177","doi":"https://doi.org/10.1371/journal.pcbi.1011383","pmid":"https://pubmed.ncbi.nlm.nih.gov/37656752"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1011383","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1011383","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1011383&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1011383&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5058914600","display_name":"Zhengqing Zhou","orcid":"https://orcid.org/0000-0002-6218-7494"},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Zhengqing Zhou","raw_affiliation_strings":["School of Physics, Center for Quantitative Biology, Peking University, Beijing, China"],"affiliations":[{"raw_affiliation_string":"School of Physics, Center for Quantitative Biology, Peking University, Beijing, China","institution_ids":["https://openalex.org/I20231570"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025306449","display_name":"Dianjie Li","orcid":"https://orcid.org/0000-0002-9976-7556"},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Dianjie Li","raw_affiliation_strings":["School of Physics, Center for Quantitative Biology, Peking University, Beijing, China"],"affiliations":[{"raw_affiliation_string":"School of Physics, Center for Quantitative Biology, Peking University, Beijing, China","institution_ids":["https://openalex.org/I20231570"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017101860","display_name":"Ziheng Zhao","orcid":"https://orcid.org/0009-0006-6511-4772"},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Ziheng Zhao","raw_affiliation_strings":["Department of Immunology, School of Basic Medical Sciences, NHC Key Laboratory of Medical Immunology, Peking University, Beijing, China"],"affiliations":[{"raw_affiliation_string":"Department of Immunology, School of Basic Medical Sciences, NHC Key Laboratory of Medical Immunology, Peking University, Beijing, China","institution_ids":["https://openalex.org/I20231570"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003375656","display_name":"Shuyu Shi","orcid":null},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]},{"id":"https://openalex.org/I4210141942","display_name":"Peking University Third Hospital","ror":"https://ror.org/04wwqze12","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210141942"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Shuyu Shi","raw_affiliation_strings":["Peking University Third Hospital, Peking University, Beijing, China"],"affiliations":[{"raw_affiliation_string":"Peking University Third Hospital, Peking University, Beijing, China","institution_ids":["https://openalex.org/I20231570","https://openalex.org/I4210141942"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057540608","display_name":"Jianghua Wu","orcid":"https://orcid.org/0000-0001-7351-8933"},"institutions":[{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]},{"id":"https://openalex.org/I1318643470","display_name":"Union Hospital","ror":"https://ror.org/01j7r2734","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I1318643470"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Jianghua Wu","raw_affiliation_strings":["Institute of Hematology, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China"],"affiliations":[{"raw_affiliation_string":"Institute of Hematology, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China","institution_ids":["https://openalex.org/I1318643470","https://openalex.org/I47720641"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100410900","display_name":"Jianwei Li","orcid":"https://orcid.org/0000-0003-4353-0960"},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Jianwei Li","raw_affiliation_strings":["School of Physics, Center for Quantitative Biology, Peking University, Beijing, China"],"affiliations":[{"raw_affiliation_string":"School of Physics, Center for Quantitative Biology, Peking University, Beijing, China","institution_ids":["https://openalex.org/I20231570"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071884290","display_name":"Jingpeng Zhang","orcid":"https://orcid.org/0000-0003-3407-0819"},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Jingpeng Zhang","raw_affiliation_strings":["School of Physics, Center for Quantitative Biology, Peking University, Beijing, China"],"affiliations":[{"raw_affiliation_string":"School of Physics, Center for Quantitative Biology, Peking University, Beijing, China","institution_ids":["https://openalex.org/I20231570"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061426997","display_name":"Ke Gui","orcid":null},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Ke Gui","raw_affiliation_strings":["Department of Immunology, School of Basic Medical Sciences, NHC Key Laboratory of Medical Immunology, Peking University, Beijing, China"],"affiliations":[{"raw_affiliation_string":"Department of Immunology, School of Basic Medical Sciences, NHC Key Laboratory of Medical Immunology, Peking University, Beijing, China","institution_ids":["https://openalex.org/I20231570"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5115595679","display_name":"Yu Zhang","orcid":"https://orcid.org/0000-0001-8296-154X"},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yu Zhang","raw_affiliation_strings":["Department of Immunology, School of Basic Medical Sciences, NHC Key Laboratory of Medical Immunology, Peking University, Beijing, China"],"affiliations":[{"raw_affiliation_string":"Department of Immunology, School of Basic Medical Sciences, NHC Key Laboratory of Medical Immunology, Peking University, Beijing, China","institution_ids":["https://openalex.org/I20231570"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029511953","display_name":"Qi Ouyang","orcid":"https://orcid.org/0000-0001-9122-420X"},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Qi Ouyang","raw_affiliation_strings":["School of Physics, Center for Quantitative Biology, Peking University, Beijing, China"],"affiliations":[{"raw_affiliation_string":"School of Physics, Center for Quantitative Biology, Peking University, Beijing, China","institution_ids":["https://openalex.org/I20231570"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048815633","display_name":"Heng Mei","orcid":"https://orcid.org/0000-0001-7941-2443"},"institutions":[{"id":"https://openalex.org/I1318643470","display_name":"Union Hospital","ror":"https://ror.org/01j7r2734","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I1318643470"]},{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Heng Mei","raw_affiliation_strings":["Institute of Hematology, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China"],"affiliations":[{"raw_affiliation_string":"Institute of Hematology, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China","institution_ids":["https://openalex.org/I1318643470","https://openalex.org/I47720641"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074069807","display_name":"Yu Hu","orcid":"https://orcid.org/0000-0002-2815-4568"},"institutions":[{"id":"https://openalex.org/I1318643470","display_name":"Union Hospital","ror":"https://ror.org/01j7r2734","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I1318643470"]},{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yu Hu","raw_affiliation_strings":["Institute of Hematology, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China"],"affiliations":[{"raw_affiliation_string":"Institute of Hematology, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China","institution_ids":["https://openalex.org/I1318643470","https://openalex.org/I47720641"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5039354723","display_name":"Fangting Li","orcid":"https://orcid.org/0000-0002-1483-1820"},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Fangting Li","raw_affiliation_strings":["School of Physics, Center for Quantitative Biology, Peking University, Beijing, China"],"affiliations":[{"raw_affiliation_string":"School of Physics, Center for Quantitative Biology, Peking University, Beijing, China","institution_ids":["https://openalex.org/I20231570"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":13,"corresponding_author_ids":["https://openalex.org/A5003375656","https://openalex.org/A5017101860","https://openalex.org/A5025306449","https://openalex.org/A5029511953","https://openalex.org/A5039354723","https://openalex.org/A5048815633","https://openalex.org/A5057540608","https://openalex.org/A5058914600","https://openalex.org/A5061426997","https://openalex.org/A5071884290","https://openalex.org/A5074069807","https://openalex.org/A5100410900","https://openalex.org/A5115595679"],"corresponding_institution_ids":["https://openalex.org/I1318643470","https://openalex.org/I20231570","https://openalex.org/I4210141942","https://openalex.org/I47720641"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":3.5405,"has_fulltext":true,"cited_by_count":18,"citation_normalized_percentile":{"value":0.93759243,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":100},"biblio":{"volume":"19","issue":"9","first_page":"e1011383","last_page":"e1011383"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10118","display_name":"SARS-CoV-2 and COVID-19 Research","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10118","display_name":"SARS-CoV-2 and COVID-19 Research","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10410","display_name":"COVID-19 epidemiological studies","score":0.9943000078201294,"subfield":{"id":"https://openalex.org/subfields/2611","display_name":"Modeling and Simulation"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11764","display_name":"Evolution and Genetic Dynamics","score":0.988099992275238,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/immune-system","display_name":"Immune system","score":0.798446536064148},{"id":"https://openalex.org/keywords/immunology","display_name":"Immunology","score":0.5867763161659241},{"id":"https://openalex.org/keywords/virus","display_name":"Virus","score":0.5389249324798584},{"id":"https://openalex.org/keywords/population","display_name":"Population","score":0.537483811378479},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.5328266024589539},{"id":"https://openalex.org/keywords/acquired-immune-system","display_name":"Acquired immune system","score":0.5087712407112122},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.49427199363708496},{"id":"https://openalex.org/keywords/viral-load","display_name":"Viral load","score":0.4865554869174957},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.4831799566745758},{"id":"https://openalex.org/keywords/innate-immune-system","display_name":"Innate immune system","score":0.4380418062210083},{"id":"https://openalex.org/keywords/antibody","display_name":"Antibody","score":0.41262075304985046},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.2574641704559326}],"concepts":[{"id":"https://openalex.org/C8891405","wikidata":"https://www.wikidata.org/wiki/Q1059","display_name":"Immune system","level":2,"score":0.798446536064148},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.5867763161659241},{"id":"https://openalex.org/C2522874641","wikidata":"https://www.wikidata.org/wiki/Q808","display_name":"Virus","level":2,"score":0.5389249324798584},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.537483811378479},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.5328266024589539},{"id":"https://openalex.org/C193419808","wikidata":"https://www.wikidata.org/wiki/Q1645075","display_name":"Acquired immune system","level":3,"score":0.5087712407112122},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.49427199363708496},{"id":"https://openalex.org/C142462285","wikidata":"https://www.wikidata.org/wiki/Q2528140","display_name":"Viral load","level":3,"score":0.4865554869174957},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.4831799566745758},{"id":"https://openalex.org/C136449434","wikidata":"https://www.wikidata.org/wiki/Q428253","display_name":"Innate immune system","level":3,"score":0.4380418062210083},{"id":"https://openalex.org/C159654299","wikidata":"https://www.wikidata.org/wiki/Q79460","display_name":"Antibody","level":2,"score":0.41262075304985046},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.2574641704559326},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C99454951","wikidata":"https://www.wikidata.org/wiki/Q932068","display_name":"Environmental health","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":true},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014777","descriptor_name":"Virus Diseases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014777","descriptor_name":"Virus Diseases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014777","descriptor_name":"Virus Diseases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014777","descriptor_name":"Virus Diseases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019562","descriptor_name":"Viral Load","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019562","descriptor_name":"Viral Load","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019562","descriptor_name":"Viral Load","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019562","descriptor_name":"Viral Load","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1371/journal.pcbi.1011383","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1011383","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1011383&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:37656752","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37656752","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10501599","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10501599","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10501599/pdf/pcbi.1011383.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:9ddd92010ee04d528de88d0a1016d6d4","is_oa":true,"landing_page_url":"https://doaj.org/article/9ddd92010ee04d528de88d0a1016d6d4","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 19, Iss 9, p e1011383 (2023)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1011383","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1011383","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1011383&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.7300000190734863,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"awards":[{"id":"https://openalex.org/G1121271761","display_name":null,"funder_award_id":"Program","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G1936649502","display_name":null,"funder_award_id":"12090054","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2087396116","display_name":null,"funder_award_id":"China","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3085993365","display_name":null,"funder_award_id":"(Grant No.","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3317480652","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G391238517","display_name":null,"funder_award_id":", and","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4165070653","display_name":null,"funder_award_id":"174007","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5994120800","display_name":null,"funder_award_id":"Natural","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7033253288","display_name":null,"funder_award_id":"Grants","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7279584839","display_name":null,"funder_award_id":"12174007","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7726157001","display_name":null,"funder_award_id":"Grant No.","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4386357177.pdf","grobid_xml":"https://content.openalex.org/works/W4386357177.grobid-xml"},"referenced_works_count":124,"referenced_works":["https://openalex.org/W1991592276","https://openalex.org/W2022098233","https://openalex.org/W2043519223","https://openalex.org/W2054519334","https://openalex.org/W2060735144","https://openalex.org/W2064059889","https://openalex.org/W2064571548","https://openalex.org/W2091129202","https://openalex.org/W2118796952","https://openalex.org/W2568283272","https://openalex.org/W2967649901","https://openalex.org/W3000413850","https://openalex.org/W3003257820","https://openalex.org/W3007460166","https://openalex.org/W3011398105","https://openalex.org/W3013125498","https://openalex.org/W3013186573","https://openalex.org/W3014735311","https://openalex.org/W3016489853","https://openalex.org/W3016523961","https://openalex.org/W3016661132","https://openalex.org/W3016746341","https://openalex.org/W3023033208","https://openalex.org/W3024643080","https://openalex.org/W3027630905","https://openalex.org/W3032394272","https://openalex.org/W3034168389","https://openalex.org/W3041960835","https://openalex.org/W3042270788","https://openalex.org/W3042833857","https://openalex.org/W3043502363","https://openalex.org/W3043831218","https://openalex.org/W3047144258","https://openalex.org/W3047719754","https://openalex.org/W3080981445","https://openalex.org/W3081502886","https://openalex.org/W3082162733","https://openalex.org/W3085420778","https://openalex.org/W3087744389","https://openalex.org/W3091610971","https://openalex.org/W3091868035","https://openalex.org/W3093988179","https://openalex.org/W3094870207","https://openalex.org/W3102328262","https://openalex.org/W3103145119","https://openalex.org/W3103598365","https://openalex.org/W3107596380","https://openalex.org/W3111255098","https://openalex.org/W3111459703","https://openalex.org/W3111590711","https://openalex.org/W3112845709","https://openalex.org/W3112902030","https://openalex.org/W3115793324","https://openalex.org/W3116925452","https://openalex.org/W3118390399","https://openalex.org/W3119342358","https://openalex.org/W3123175540","https://openalex.org/W3126652124","https://openalex.org/W3128154910","https://openalex.org/W3130389391","https://openalex.org/W3134208712","https://openalex.org/W3139167208","https://openalex.org/W3154980577","https://openalex.org/W3161424923","https://openalex.org/W3163785571","https://openalex.org/W3164002264","https://openalex.org/W3164547793","https://openalex.org/W3167079926","https://openalex.org/W3168460051","https://openalex.org/W3172858351","https://openalex.org/W3174133744","https://openalex.org/W3174181317","https://openalex.org/W3181534243","https://openalex.org/W3182094313","https://openalex.org/W3184226105","https://openalex.org/W3193641425","https://openalex.org/W3196516725","https://openalex.org/W3198233589","https://openalex.org/W3198305631","https://openalex.org/W3198487015","https://openalex.org/W3200998454","https://openalex.org/W3203507661","https://openalex.org/W3204470084","https://openalex.org/W3204857585","https://openalex.org/W3208677062","https://openalex.org/W3209028723","https://openalex.org/W3209269499","https://openalex.org/W3215049942","https://openalex.org/W3216106237","https://openalex.org/W3216606420","https://openalex.org/W3217549965","https://openalex.org/W4200030049","https://openalex.org/W4200115612","https://openalex.org/W4200209174","https://openalex.org/W4200323949","https://openalex.org/W4205815466","https://openalex.org/W4206024366","https://openalex.org/W4206127973","https://openalex.org/W4206245015","https://openalex.org/W4206952965","https://openalex.org/W4210308999","https://openalex.org/W4210642183","https://openalex.org/W4210843726","https://openalex.org/W4212891121","https://openalex.org/W4213386337","https://openalex.org/W4214560814","https://openalex.org/W4220807057","https://openalex.org/W4220884449","https://openalex.org/W4220904663","https://openalex.org/W4225691034","https://openalex.org/W4226112770","https://openalex.org/W4226145347","https://openalex.org/W4226181138","https://openalex.org/W4280548301","https://openalex.org/W4280594901","https://openalex.org/W4283582637","https://openalex.org/W4290774080","https://openalex.org/W4292229998","https://openalex.org/W4292323551","https://openalex.org/W4292475523","https://openalex.org/W4297327551","https://openalex.org/W4310643051","https://openalex.org/W4313500110","https://openalex.org/W6846841974"],"related_works":["https://openalex.org/W1551592253","https://openalex.org/W2050558417","https://openalex.org/W4225914417","https://openalex.org/W2135436588","https://openalex.org/W3030144597","https://openalex.org/W2498374562","https://openalex.org/W2951371476","https://openalex.org/W2044757050","https://openalex.org/W4231524083","https://openalex.org/W2073938056"],"abstract_inverted_index":{"Once":[0],"challenged":[1],"by":[2,148],"the":[3,6,35,46,60,69,74,126,141],"SARS-CoV-2":[4,92,123,149],"virus,":[5],"human":[7],"host":[8,24,144],"immune":[9,28,42,64,78,97],"system":[10],"triggers":[11],"a":[12,19,136],"dynamic":[13,36],"process":[14],"against":[15,91],"infection.":[16,93],"We":[17,58,86],"constructed":[18],"mathematical":[20,130],"model":[21],"to":[22,30,67,72,80,111,157],"describe":[23],"innate":[25],"and":[26,41,71,104,151,161],"adaptive":[27],"response":[29,145],"viral":[31,39],"challenge.":[32],"Based":[33],"on":[34,100],"properties":[37],"of":[38,55,63,83,122,128,143],"load":[40],"response,":[43],"we":[44,118],"classified":[45],"resulting":[47],"dynamics":[48,121,142],"into":[49],"four":[50],"modes,":[51],"reflecting":[52],"increasing":[53],"severity":[54],"COVID-19":[56],"disease.":[57],"found":[59],"numerical":[61],"product":[62],"system's":[65],"ability":[66],"clear":[68],"virus":[70],"kill":[73],"infected":[75],"cells,":[76],"namely":[77],"efficacy,":[79],"be":[81,109,155],"predictive":[82],"disease":[84],"severity.":[85],"also":[87],"investigated":[88],"vaccine-induced":[89],"protection":[90,115,160],"Results":[94],"suggested":[95],"that":[96],"efficacy":[98],"based":[99],"memory":[101],"T":[102],"cells":[103],"neutralizing":[105],"antibody":[106],"titers":[107],"could":[108],"used":[110,156],"predict":[112,158],"population":[113],"vaccine":[114,159],"rates.":[116],"Finally,":[117],"analyzed":[119],"infection":[120],"variants":[124],"within":[125],"construct":[127],"our":[129,133],"model.":[131],"Overall,":[132],"results":[134],"provide":[135],"systematic":[137],"framework":[138,153],"for":[139],"understanding":[140],"upon":[146],"challenge":[147],"infection,":[150],"this":[152],"can":[154],"perform":[162],"clinical":[163],"diagnosis.":[164]},"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":7},{"year":2024,"cited_by_count":7}],"updated_date":"2026-03-18T14:38:29.013473","created_date":"2025-10-10T00:00:00"}
