{"id":"https://openalex.org/W4366463099","doi":"https://doi.org/10.1371/journal.pcbi.1011031","title":"Ten simple rules for working with other people\u2019s code","display_name":"Ten simple rules for working with other people\u2019s code","publication_year":2023,"publication_date":"2023-04-20","ids":{"openalex":"https://openalex.org/W4366463099","doi":"https://doi.org/10.1371/journal.pcbi.1011031","pmid":"https://pubmed.ncbi.nlm.nih.gov/37079492"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1011031","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1011031","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1011031&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1011031&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5089130442","display_name":"Charlie Pilgrim","orcid":"https://orcid.org/0000-0002-3800-677X"},"institutions":[{"id":"https://openalex.org/I39555362","display_name":"University of Warwick","ror":"https://ror.org/01a77tt86","country_code":"GB","type":"education","lineage":["https://openalex.org/I39555362"]},{"id":"https://openalex.org/I45129253","display_name":"University College London","ror":"https://ror.org/02jx3x895","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I45129253"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Charlie Pilgrim","raw_affiliation_strings":["Experimental Psychology, University College London, London, United Kingdom","The Mathematics of Systems CDT, Mathematics Department, The University of Warwick, Coventry, United Kingdom"],"raw_orcid":"https://orcid.org/0000-0002-3800-677X","affiliations":[{"raw_affiliation_string":"Experimental Psychology, University College London, London, United Kingdom","institution_ids":["https://openalex.org/I45129253"]},{"raw_affiliation_string":"The Mathematics of Systems CDT, Mathematics Department, The University of Warwick, Coventry, United Kingdom","institution_ids":["https://openalex.org/I39555362"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061511981","display_name":"Paul R. C. Kent","orcid":"https://orcid.org/0000-0001-5539-4017"},"institutions":[{"id":"https://openalex.org/I39555362","display_name":"University of Warwick","ror":"https://ror.org/01a77tt86","country_code":"GB","type":"education","lineage":["https://openalex.org/I39555362"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Paul Kent","raw_affiliation_strings":["The Mathematics of Systems CDT, Mathematics Department, The University of Warwick, Coventry, United Kingdom"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Mathematics of Systems CDT, Mathematics Department, The University of Warwick, Coventry, United Kingdom","institution_ids":["https://openalex.org/I39555362"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057896998","display_name":"Kasra Hosseini","orcid":"https://orcid.org/0000-0003-4396-6019"},"institutions":[{"id":"https://openalex.org/I4210128584","display_name":"The Alan Turing Institute","ror":"https://ror.org/035dkdb55","country_code":"GB","type":"facility","lineage":["https://openalex.org/I4210128584"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Kasra Hosseini","raw_affiliation_strings":["Research Engineering Group, The Alan Turing Institute, London, United Kingdom"],"raw_orcid":"https://orcid.org/0000-0003-4396-6019","affiliations":[{"raw_affiliation_string":"Research Engineering Group, The Alan Turing Institute, London, United Kingdom","institution_ids":["https://openalex.org/I4210128584"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5018633222","display_name":"Ed Chalstrey","orcid":null},"institutions":[{"id":"https://openalex.org/I4210128584","display_name":"The Alan Turing Institute","ror":"https://ror.org/035dkdb55","country_code":"GB","type":"facility","lineage":["https://openalex.org/I4210128584"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Ed Chalstrey","raw_affiliation_strings":["Research Engineering Group, The Alan Turing Institute, London, United Kingdom"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Research Engineering Group, The Alan Turing Institute, London, United Kingdom","institution_ids":["https://openalex.org/I4210128584"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5018633222","https://openalex.org/A5057896998","https://openalex.org/A5061511981","https://openalex.org/A5089130442"],"corresponding_institution_ids":["https://openalex.org/I39555362","https://openalex.org/I4210128584","https://openalex.org/I45129253"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":1.0727,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.85989074,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"19","issue":"4","first_page":"e1011031","last_page":"e1011031"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T11937","display_name":"Research Data Management Practices","score":0.9811000227928162,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.9645000100135803,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/simple","display_name":"Simple (philosophy)","score":0.6482048034667969},{"id":"https://openalex.org/keywords/code","display_name":"Code (set theory)","score":0.5104838609695435},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.46503230929374695},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.22975149750709534}],"concepts":[{"id":"https://openalex.org/C2780586882","wikidata":"https://www.wikidata.org/wiki/Q7520643","display_name":"Simple (philosophy)","level":2,"score":0.6482048034667969},{"id":"https://openalex.org/C2776760102","wikidata":"https://www.wikidata.org/wiki/Q5139990","display_name":"Code (set theory)","level":3,"score":0.5104838609695435},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.46503230929374695},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.22975149750709534},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":7,"locations":[{"id":"doi:10.1371/journal.pcbi.1011031","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1011031","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1011031&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:37079492","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37079492","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:eprints.ucl.ac.uk.OAI2:10169313","is_oa":true,"landing_page_url":"https://discovery.ucl.ac.uk/id/eprint/10169313/","pdf_url":"https://discovery.ucl.ac.uk/10169313/1/journal.pcbi.1011031.pdf","source":{"id":"https://openalex.org/S4306400024","display_name":"UCL Discovery (University College London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I45129253","host_organization_name":"University College London","host_organization_lineage":["https://openalex.org/I45129253"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"   PLoS Computational Biology , 19  (4)    , Article e1011031. (2023)      ","raw_type":"Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:10118162","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10118162","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10118162/pdf/pcbi.1011031.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:23baee80d6cc4e2d8325fc78d471318a","is_oa":true,"landing_page_url":"https://doaj.org/article/23baee80d6cc4e2d8325fc78d471318a","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 19, Iss 4 (2023)","raw_type":"article"},{"id":"pmh:oai:doaj.org/article:5d981529492e470bbaab34ed848e9268","is_oa":true,"landing_page_url":"https://doaj.org/article/5d981529492e470bbaab34ed848e9268","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 19, Iss 4, p e1011031 (2023)","raw_type":"article"},{"id":"pmh:oai:wrap.warwick.ac.uk:178457","is_oa":false,"landing_page_url":"https://wrap.warwick.ac.uk/178457/","pdf_url":null,"source":{"id":"https://openalex.org/S4306400665","display_name":"Warwick Research Archive Portal (University of Warwick)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I39555362","host_organization_name":"University of Warwick","host_organization_lineage":["https://openalex.org/I39555362"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Journal Article"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1011031","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1011031","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1011031&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.41999998688697815,"id":"https://metadata.un.org/sdg/8","display_name":"Decent work and economic growth"}],"awards":[{"id":"https://openalex.org/G1055012631","display_name":"EPSRC and MRC Centre for Doctoral Training in Mathematics for Real-World Systems","funder_award_id":"EP/L015374/1","funder_id":"https://openalex.org/F4320334627","funder_display_name":"Engineering and Physical Sciences Research Council"},{"id":"https://openalex.org/G1633672591","display_name":null,"funder_award_id":"N510129","funder_id":"https://openalex.org/F4320334627","funder_display_name":"Engineering and Physical Sciences Research Council"},{"id":"https://openalex.org/G2932985130","display_name":null,"funder_award_id":"EP/N510129/1","funder_id":"https://openalex.org/F4320320279","funder_display_name":"University of Warwick"},{"id":"https://openalex.org/G3855435662","display_name":null,"funder_award_id":"N510129","funder_id":"https://openalex.org/F4320313467","funder_display_name":"Alan Turing Institute"},{"id":"https://openalex.org/G4072067573","display_name":null,"funder_award_id":"EP/N510129/1","funder_id":"https://openalex.org/F4320313467","funder_display_name":"Alan Turing Institute"},{"id":"https://openalex.org/G444630160","display_name":null,"funder_award_id":"EP/N510129/","funder_id":"https://openalex.org/F4320334627","funder_display_name":"Engineering and Physical Sciences Research Council"},{"id":"https://openalex.org/G4500485203","display_name":"The Alan Turing Institute","funder_award_id":"EP/N510129/1","funder_id":"https://openalex.org/F4320334627","funder_display_name":"Engineering and Physical Sciences Research Council"},{"id":"https://openalex.org/G8597009950","display_name":null,"funder_award_id":"EP/N510129/1","funder_id":"https://openalex.org/F4320334627","funder_display_name":"Engineering and Physical Sciences Research Council"}],"funders":[{"id":"https://openalex.org/F4320313467","display_name":"Alan Turing Institute","ror":"https://ror.org/035dkdb55"},{"id":"https://openalex.org/F4320320279","display_name":"University of Warwick","ror":"https://ror.org/01a77tt86"},{"id":"https://openalex.org/F4320334627","display_name":"Engineering and Physical Sciences Research Council","ror":"https://ror.org/0439y7842"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4366463099.pdf","grobid_xml":"https://content.openalex.org/works/W4366463099.grobid-xml"},"referenced_works_count":16,"referenced_works":["https://openalex.org/W1835879695","https://openalex.org/W2008985174","https://openalex.org/W2014578004","https://openalex.org/W2036318837","https://openalex.org/W2090469606","https://openalex.org/W2122401044","https://openalex.org/W2177002043","https://openalex.org/W2270443308","https://openalex.org/W2406493898","https://openalex.org/W2903593834","https://openalex.org/W3080258022","https://openalex.org/W3120562800","https://openalex.org/W3132826558","https://openalex.org/W3133607277","https://openalex.org/W3214383379","https://openalex.org/W4210512919"],"related_works":["https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W1585007175","https://openalex.org/W2382521049","https://openalex.org/W2390279801","https://openalex.org/W2144385241","https://openalex.org/W2358668433","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W2382290278"],"abstract_inverted_index":{"Every":[0],"time":[1,114],"that":[2,14,73,95,126],"you":[3,7],"use":[4,90],"a":[5,19,22,70,133,142],"computer,":[6],"are":[8,46,96],"using":[9],"someone":[10],"else's":[11],"code,":[12],"whether":[13],"be":[15,84,105],"an":[16,61],"operating":[17,62],"system,":[18],"word":[20],"processor,":[21],"web":[23],"application,":[24],"research":[25],"tools,":[26],"or":[27,51],"simply":[28],"code":[29,33,79,131],"snippets.":[30],"Almost":[31],"all":[32],"has":[34],"some":[35],"bugs":[36,45,103],"and":[37,86,92,107,111,138],"errors.":[38],"In":[39],"day":[40,42],"to":[41,83,109,116],"life,":[43],"these":[44],"usually":[47],"not":[48,97],"too":[49],"important":[50],"at":[52],"least":[53],"obvious":[54],"when":[55],"they":[56],"do":[57],"happen":[58],"(think":[59],"of":[60,144],"system":[63],"crashing).":[64],"However,":[65],"in":[66],"research,":[67],"there":[68],"is":[69,122,132,139],"perfect":[71],"storm":[72],"makes":[74],"working":[75,127],"with":[76,99,128],"other":[77,129],"people's":[78,130],"particularly":[80],"challenging-research":[81],"needs":[82],"correct":[85],"accurate,":[87],"researchers":[88,112,137],"often":[89],"niche":[91],"non-commercial":[93],"tools":[94],"built":[98],"best":[100],"software":[101],"practices,":[102],"can":[104],"subtle":[106],"hard":[108],"detect,":[110],"have":[113],"pressures":[115],"get":[117],"things":[118],"done":[119],"quickly.":[120],"It":[121],"no":[123],"surprise":[124],"then":[125],"common":[134],"frustration":[135],"for":[136],"even":[140],"considered":[141],"rite":[143],"passage":[145]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1}],"updated_date":"2026-05-06T08:25:59.206177","created_date":"2025-10-10T00:00:00"}
