{"id":"https://openalex.org/W4387737033","doi":"https://doi.org/10.1371/journal.pcbi.1011014","title":"Distilling identifiable and interpretable dynamic models from biological data","display_name":"Distilling identifiable and interpretable dynamic models from biological data","publication_year":2023,"publication_date":"2023-10-18","ids":{"openalex":"https://openalex.org/W4387737033","doi":"https://doi.org/10.1371/journal.pcbi.1011014","pmid":"https://pubmed.ncbi.nlm.nih.gov/37851682"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1011014","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1011014","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1011014&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1011014&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5008250075","display_name":"Gemma Massonis","orcid":"https://orcid.org/0000-0001-8740-825X"},"institutions":[{"id":"https://openalex.org/I134820265","display_name":"Consejo Superior de Investigaciones Cient\u00edficas","ror":"https://ror.org/02gfc7t72","country_code":"ES","type":"government","lineage":["https://openalex.org/I134820265"]},{"id":"https://openalex.org/I4210098595","display_name":"Misi\u00f3n Biol\u00f3gica de Galicia","ror":"https://ror.org/00tpn9z48","country_code":"ES","type":"nonprofit","lineage":["https://openalex.org/I134820265","https://openalex.org/I4210098595"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Gemma Massonis","raw_affiliation_strings":["Computational Biology Lab, MBG-CSIC (Spanish National Research Council), Pontevedra, Galicia, Spain"],"raw_orcid":"https://orcid.org/0000-0001-8740-825X","affiliations":[{"raw_affiliation_string":"Computational Biology Lab, MBG-CSIC (Spanish National Research Council), Pontevedra, Galicia, Spain","institution_ids":["https://openalex.org/I134820265","https://openalex.org/I4210098595"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032919554","display_name":"Alejandro F. Villaverde","orcid":"https://orcid.org/0000-0001-7401-7380"},"institutions":[{"id":"https://openalex.org/I2802755756","display_name":"Centro de Supercomputaci\u00f3n de Galicia","ror":"https://ror.org/02z51cq88","country_code":"ES","type":"nonprofit","lineage":["https://openalex.org/I2802755756"]},{"id":"https://openalex.org/I6289922","display_name":"Universidade de Vigo","ror":"https://ror.org/05rdf8595","country_code":"ES","type":"education","lineage":["https://openalex.org/I6289922"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Alejandro F. Villaverde","raw_affiliation_strings":["CITMAga, Santiago de Compostela, Galicia, Spain","Universidade de Vigo, Department of Systems and Control Engineering, Vigo, Galicia, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CITMAga, Santiago de Compostela, Galicia, Spain","institution_ids":["https://openalex.org/I2802755756"]},{"raw_affiliation_string":"Universidade de Vigo, Department of Systems and Control Engineering, Vigo, Galicia, Spain","institution_ids":["https://openalex.org/I6289922"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5090264675","display_name":"Julio R. Banga","orcid":"https://orcid.org/0000-0002-4245-0320"},"institutions":[{"id":"https://openalex.org/I134820265","display_name":"Consejo Superior de Investigaciones Cient\u00edficas","ror":"https://ror.org/02gfc7t72","country_code":"ES","type":"government","lineage":["https://openalex.org/I134820265"]},{"id":"https://openalex.org/I4210098595","display_name":"Misi\u00f3n Biol\u00f3gica de Galicia","ror":"https://ror.org/00tpn9z48","country_code":"ES","type":"nonprofit","lineage":["https://openalex.org/I134820265","https://openalex.org/I4210098595"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Julio R. Banga","raw_affiliation_strings":["Computational Biology Lab, MBG-CSIC (Spanish National Research Council), Pontevedra, Galicia, Spain"],"raw_orcid":"https://orcid.org/0000-0002-4245-0320","affiliations":[{"raw_affiliation_string":"Computational Biology Lab, MBG-CSIC (Spanish National Research Council), Pontevedra, Galicia, Spain","institution_ids":["https://openalex.org/I134820265","https://openalex.org/I4210098595"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5032919554","https://openalex.org/A5090264675"],"corresponding_institution_ids":["https://openalex.org/I134820265","https://openalex.org/I2802755756","https://openalex.org/I4210098595","https://openalex.org/I6289922"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2629,"currency":"EUR","value_usd":2835},"fwci":1.7879,"has_fulltext":true,"cited_by_count":14,"citation_normalized_percentile":{"value":0.83819208,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"19","issue":"10","first_page":"e1011014","last_page":"e1011014"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11206","display_name":"Model Reduction and Neural Networks","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/3109","display_name":"Statistical and Nonlinear Physics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11206","display_name":"Model Reduction and Neural Networks","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/3109","display_name":"Statistical and Nonlinear Physics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9921000003814697,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9908000230789185,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/identifiability","display_name":"Identifiability","score":0.7734304666519165},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6651724576950073},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.5852199196815491},{"id":"https://openalex.org/keywords/nonlinear-system","display_name":"Nonlinear system","score":0.5456420183181763},{"id":"https://openalex.org/keywords/observability","display_name":"Observability","score":0.5409193634986877},{"id":"https://openalex.org/keywords/dynamical-systems-theory","display_name":"Dynamical systems theory","score":0.4620833098888397},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.46052369475364685},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4499172568321228},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.4177578389644623},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.33516746759414673},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.21732664108276367},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.14397844672203064},{"id":"https://openalex.org/keywords/applied-mathematics","display_name":"Applied mathematics","score":0.12931013107299805},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10516554117202759}],"concepts":[{"id":"https://openalex.org/C122770356","wikidata":"https://www.wikidata.org/wiki/Q1656753","display_name":"Identifiability","level":2,"score":0.7734304666519165},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6651724576950073},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.5852199196815491},{"id":"https://openalex.org/C158622935","wikidata":"https://www.wikidata.org/wiki/Q660848","display_name":"Nonlinear system","level":2,"score":0.5456420183181763},{"id":"https://openalex.org/C36299963","wikidata":"https://www.wikidata.org/wiki/Q1369844","display_name":"Observability","level":2,"score":0.5409193634986877},{"id":"https://openalex.org/C79379906","wikidata":"https://www.wikidata.org/wiki/Q3174497","display_name":"Dynamical systems theory","level":2,"score":0.4620833098888397},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.46052369475364685},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4499172568321228},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.4177578389644623},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.33516746759414673},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.21732664108276367},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.14397844672203064},{"id":"https://openalex.org/C28826006","wikidata":"https://www.wikidata.org/wiki/Q33521","display_name":"Applied mathematics","level":1,"score":0.12931013107299805},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10516554117202759},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017711","descriptor_name":"Nonlinear Dynamics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017711","descriptor_name":"Nonlinear Dynamics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017711","descriptor_name":"Nonlinear Dynamics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017711","descriptor_name":"Nonlinear Dynamics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017711","descriptor_name":"Nonlinear Dynamics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":7,"locations":[{"id":"doi:10.1371/journal.pcbi.1011014","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1011014","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1011014&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:37851682","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37851682","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:digital.csic.es:10261/343572","is_oa":true,"landing_page_url":"http://hdl.handle.net/10261/343572","pdf_url":"https://digital.csic.es/bitstream/10261/343572/1/journal.pcbi.1011014.pdf","source":{"id":"https://openalex.org/S4306400616","display_name":"DIGITAL.CSIC (Spanish National Research Council (CSIC))","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I134820265","host_organization_name":"Consejo Superior de Investigaciones Cient\u00edficas","host_organization_lineage":["https://openalex.org/I134820265"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"http://purl.org/coar/resource_type/c_6501"},{"id":"pmh:oai:pubmedcentral.nih.gov:10615316","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10615316","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10615316/pdf/pcbi.1011014.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"},{"id":"pmh:oai:www.investigo.biblioteca.uvigo.es:11093/5399","is_oa":true,"landing_page_url":"http://hdl.handle.net/11093/5399","pdf_url":"https://www.investigo.biblioteca.uvigo.es/xmlui/bitstream/11093/5399/4/2023_massonis_dynamic_models.pdf","source":{"id":"https://openalex.org/S4377196408","display_name":"Investigo Institutional repository of UVigo (Universidade de Vigo)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I6289922","host_organization_name":"Universidade de Vigo","host_organization_lineage":["https://openalex.org/I6289922"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"article"},{"id":"pmh:oai:RePEc:plo:pcbi00:1011014","is_oa":false,"landing_page_url":"https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1011014","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},{"id":"pmh:oai:doaj.org/article:1225c4bb0dd74c2c8a4a56f9d90b87f3","is_oa":true,"landing_page_url":"https://doaj.org/article/1225c4bb0dd74c2c8a4a56f9d90b87f3","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 19, Iss 10, p e1011014 (2023)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1011014","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1011014","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1011014&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1091473466","display_name":null,"funder_award_id":"ED431F 2021/003","funder_id":"https://openalex.org/F4320326655","funder_display_name":"Xunta de Galicia"},{"id":"https://openalex.org/G1175115578","display_name":null,"funder_award_id":"AEI//10.13039/501100011033/","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G1771795543","display_name":null,"funder_award_id":"PID2020-117271RB-C22","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G2262748287","display_name":null,"funder_award_id":"501100011033","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G2713276326","display_name":null,"funder_award_id":"by MCIN/AEI/10.13039/501100011033","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G300979063","display_name":null,"funder_award_id":"10.13039/501100011033","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G3255697262","display_name":null,"funder_award_id":"PID2020-113992RA-I00","funder_id":"https://openalex.org/F4320326655","funder_display_name":"Xunta de Galicia"},{"id":"https://openalex.org/G34346518","display_name":null,"funder_award_id":"MCIN/AEI/10.13039/501 100 011 033","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G3480869486","display_name":null,"funder_award_id":"13039","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G4092263876","display_name":null,"funder_award_id":"MCIN/AEI /10.13039/501100011033","funder_id":"https://openalex.org/F4320326655","funder_display_name":"Xunta de Galicia"},{"id":"https://openalex.org/G4120009395","display_name":null,"funder_award_id":"RYC-2019-027537-I","funder_id":"https://openalex.org/F4320326655","funder_display_name":"Xunta de Galicia"},{"id":"https://openalex.org/G425668148","display_name":null,"funder_award_id":".13039/501100011033","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G4462967385","display_name":null,"funder_award_id":"ED431F","funder_id":"https://openalex.org/F4320326655","funder_display_name":"Xunta de Galicia"},{"id":"https://openalex.org/G4526231891","display_name":null,"funder_award_id":"MCIN / AEI/10","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G5080475149","display_name":null,"funder_award_id":"10.13039","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G546199279","display_name":null,"funder_award_id":"MCIN/AEI/10.13039/ 501100011033","funder_id":"https://openalex.org/F4320338080","funder_display_name":"European Social Fund"},{"id":"https://openalex.org/G6218905885","display_name":null,"funder_award_id":"501100011033","funder_id":"https://openalex.org/F4320338080","funder_display_name":"European Social Fund"},{"id":"https://openalex.org/G67688110","display_name":null,"funder_award_id":"AEI/10.13039/501100011033","funder_id":"https://openalex.org/F4320326655","funder_display_name":"Xunta de Galicia"},{"id":"https://openalex.org/G7084143925","display_name":null,"funder_award_id":"AEI/10","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G8888022036","display_name":null,"funder_award_id":"AEI/10.13039/501100011033","funder_id":"https://openalex.org/F4320338080","funder_display_name":"European Social Fund"}],"funders":[{"id":"https://openalex.org/F4320326655","display_name":"Xunta de Galicia","ror":"https://ror.org/0181xnw06"},{"id":"https://openalex.org/F4320335598","display_name":"Agencia Estatal de Investigaci\u00f3n","ror":null},{"id":"https://openalex.org/F4320338080","display_name":"European Social Fund","ror":"https://ror.org/00k4n6c32"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4387737033.pdf","grobid_xml":"https://content.openalex.org/works/W4387737033.grobid-xml"},"referenced_works_count":77,"referenced_works":["https://openalex.org/W133148819","https://openalex.org/W1583357624","https://openalex.org/W1967668980","https://openalex.org/W1988621592","https://openalex.org/W1994695086","https://openalex.org/W2012905675","https://openalex.org/W2048951385","https://openalex.org/W2081240630","https://openalex.org/W2092492826","https://openalex.org/W2093696424","https://openalex.org/W2093828424","https://openalex.org/W2107280554","https://openalex.org/W2122950891","https://openalex.org/W2133068979","https://openalex.org/W2141394518","https://openalex.org/W2157966686","https://openalex.org/W2162317699","https://openalex.org/W2168648059","https://openalex.org/W2170252203","https://openalex.org/W2239232218","https://openalex.org/W2255206421","https://openalex.org/W2396005362","https://openalex.org/W2402945115","https://openalex.org/W2460076960","https://openalex.org/W2552635486","https://openalex.org/W2605543710","https://openalex.org/W2641287658","https://openalex.org/W2738933006","https://openalex.org/W2770718418","https://openalex.org/W2888857063","https://openalex.org/W2889716319","https://openalex.org/W2892208363","https://openalex.org/W2892676085","https://openalex.org/W2905083628","https://openalex.org/W2951191580","https://openalex.org/W2954868958","https://openalex.org/W2964145209","https://openalex.org/W2969228105","https://openalex.org/W2982380908","https://openalex.org/W2999026783","https://openalex.org/W3003690504","https://openalex.org/W3003922491","https://openalex.org/W3014869516","https://openalex.org/W3016401366","https://openalex.org/W3087723685","https://openalex.org/W3092527036","https://openalex.org/W3095240514","https://openalex.org/W3100641539","https://openalex.org/W3126293391","https://openalex.org/W3129940801","https://openalex.org/W3134362241","https://openalex.org/W3139456908","https://openalex.org/W3157497780","https://openalex.org/W3163993681","https://openalex.org/W3164124231","https://openalex.org/W3187435263","https://openalex.org/W3198180641","https://openalex.org/W3199023886","https://openalex.org/W3215447930","https://openalex.org/W3216319821","https://openalex.org/W4210560064","https://openalex.org/W4211059059","https://openalex.org/W4214537854","https://openalex.org/W4240465045","https://openalex.org/W4283207540","https://openalex.org/W4286781802","https://openalex.org/W4293661336","https://openalex.org/W4308489451","https://openalex.org/W4309134934","https://openalex.org/W4309361673","https://openalex.org/W4318755299","https://openalex.org/W4324028835","https://openalex.org/W4324074103","https://openalex.org/W4387178584","https://openalex.org/W4399071506","https://openalex.org/W6605430434","https://openalex.org/W6777336434"],"related_works":["https://openalex.org/W2046459260","https://openalex.org/W2765830098","https://openalex.org/W2967463586","https://openalex.org/W2074679142","https://openalex.org/W2724847603","https://openalex.org/W1971989957","https://openalex.org/W2517338020","https://openalex.org/W3157641275","https://openalex.org/W1936791174","https://openalex.org/W2008365461"],"abstract_inverted_index":{"Mechanistic":[0],"dynamical":[1],"models":[2,36,63,126,134,161,225],"allow":[3],"us":[4],"to":[5,25,121,177,201,242],"study":[6],"the":[7,31,59,68,75,96,104,122,153,187,207],"behavior":[8],"of":[9,34,61,67,78,98,106,124,136,138,156,169,189,209],"complex":[10],"biological":[11,133,203],"systems.":[12],"They":[13],"can":[14,185],"provide":[15],"an":[16,42,92],"objective":[17],"and":[18,41,83,159,172,181,197,247],"quantitative":[19],"understanding":[20],"that":[21,226],"would":[22],"be":[23],"difficult":[24],"achieve":[26],"through":[27],"other":[28],"means.":[29],"However,":[30],"systematic":[32],"development":[33,60],"these":[35,230],"is":[37,71,91,251],"a":[38,146,190,244],"non-trivial":[39],"exercise":[40],"open":[43],"problem":[44],"in":[45,110,240],"computational":[46],"biology.":[47],"Currently,":[48],"many":[49],"research":[50],"efforts":[51],"are":[52,163,227],"focused":[53],"on":[54,132],"model":[55,191,249],"discovery,":[56],"i.e.":[57],"automating":[58],"interpretable":[62],"from":[64],"data.":[65],"One":[66],"main":[69],"frameworks":[70],"sparse":[72,76],"regression,":[73],"where":[74],"identification":[77,105],"nonlinear":[79,100,140],"dynamics":[80],"(SINDy)":[81],"algorithm":[82],"its":[84,194,199],"variants":[85],"have":[86],"enjoyed":[87],"great":[88],"success.":[89],"SINDy-PI":[90,116,222],"extension":[93],"which":[94,162,184,250],"allows":[95,152],"discovery":[97,155],"rational":[99],"terms,":[101],"thus":[102],"enabling":[103],"kinetic":[107],"functions":[108],"common":[109],"biochemical":[111],"networks,":[112],"such":[113],"as":[114],"Michaelis-Menten.":[115],"also":[117,164,252],"pays":[118],"special":[119],"attention":[120],"recovery":[123],"parsimonious":[125],"(Occam's":[127],"razor).":[128],"Here":[129],"we":[130,232],"focus":[131],"composed":[135],"sets":[137],"deterministic":[139],"ordinary":[141],"differential":[142],"equations.":[143],"We":[144,205,216],"present":[145],"methodology":[147],"that,":[148,218],"combined":[149],"with":[150,212],"SINDy-PI,":[151],"automatic":[154],"structurally":[157,245],"identifiable":[158,246],"observable":[160,248],"mechanistically":[165],"interpretable.":[166,253],"The":[167],"lack":[168],"structural":[170],"identifiability":[171],"observability":[173],"makes":[174],"it":[175],"impossible":[176],"uniquely":[178],"infer":[179],"parameter":[180],"state":[182],"variables,":[183],"compromise":[186],"usefulness":[188],"by":[192],"distorting":[193],"mechanistic":[195],"significance":[196],"hampering":[198],"ability":[200],"produce":[202],"insights.":[204],"illustrate":[206],"performance":[208],"our":[210,235],"method":[211,236],"six":[213],"case":[214],"studies.":[215],"find":[217],"despite":[219],"enforcing":[220],"sparsity,":[221],"sometimes":[223],"yields":[224],"unidentifiable.":[228],"In":[229],"cases":[231],"show":[233],"how":[234],"transforms":[237],"their":[238],"equations":[239],"order":[241],"obtain":[243]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":6},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":1}],"updated_date":"2026-08-05T07:39:15.569665","created_date":"2025-10-10T00:00:00"}
