{"id":"https://openalex.org/W4327683686","doi":"https://doi.org/10.1371/journal.pcbi.1010939","title":"PCB: A pseudotemporal causality-based Bayesian approach to identify EMT-associated regulatory relationships of AS events and RBPs during breast cancer progression","display_name":"PCB: A pseudotemporal causality-based Bayesian approach to identify EMT-associated regulatory relationships of AS events and RBPs during breast cancer progression","publication_year":2023,"publication_date":"2023-03-17","ids":{"openalex":"https://openalex.org/W4327683686","doi":"https://doi.org/10.1371/journal.pcbi.1010939","pmid":"https://pubmed.ncbi.nlm.nih.gov/36930678"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1010939","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1010939","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1010939&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1010939&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100914412","display_name":"Liangjie Sun","orcid":null},"institutions":[{"id":"https://openalex.org/I889458895","display_name":"University of Hong Kong","ror":"https://ror.org/02zhqgq86","country_code":"HK","type":"education","lineage":["https://openalex.org/I889458895"]}],"countries":["HK"],"is_corresponding":true,"raw_author_name":"Liangjie Sun","raw_affiliation_strings":["Department of Mathematics, The University of Hong Kong, Hong Kong, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Mathematics, The University of Hong Kong, Hong Kong, China","institution_ids":["https://openalex.org/I889458895"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079234443","display_name":"Yushan Qiu","orcid":"https://orcid.org/0000-0002-9393-3648"},"institutions":[{"id":"https://openalex.org/I180726961","display_name":"Shenzhen University","ror":"https://ror.org/01vy4gh70","country_code":"CN","type":"education","lineage":["https://openalex.org/I180726961"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yushan Qiu","raw_affiliation_strings":["College of Mathematics and Statistics, Shenzhen University, Shenzhen, China"],"raw_orcid":"https://orcid.org/0000-0002-9393-3648","affiliations":[{"raw_affiliation_string":"College of Mathematics and Statistics, Shenzhen University, Shenzhen, China","institution_ids":["https://openalex.org/I180726961"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086061723","display_name":"Wai\u2010Ki Ching","orcid":"https://orcid.org/0000-0002-5785-3210"},"institutions":[{"id":"https://openalex.org/I889458895","display_name":"University of Hong Kong","ror":"https://ror.org/02zhqgq86","country_code":"HK","type":"education","lineage":["https://openalex.org/I889458895"]}],"countries":["HK"],"is_corresponding":true,"raw_author_name":"Wai-Ki Ching","raw_affiliation_strings":["Department of Mathematics, The University of Hong Kong, Hong Kong, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Mathematics, The University of Hong Kong, Hong Kong, China","institution_ids":["https://openalex.org/I889458895"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010031834","display_name":"Pu Zhao","orcid":"https://orcid.org/0000-0001-6164-8300"},"institutions":[{"id":"https://openalex.org/I9224756","display_name":"Northeastern University","ror":"https://ror.org/03awzbc87","country_code":"CN","type":"education","lineage":["https://openalex.org/I9224756"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Pu Zhao","raw_affiliation_strings":["College of Life and Health Sciences, Northeastern University, Shenyang, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Life and Health Sciences, Northeastern University, Shenyang, China","institution_ids":["https://openalex.org/I9224756"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5017426085","display_name":"Quan Zou","orcid":"https://orcid.org/0000-0001-6406-1142"},"institutions":[{"id":"https://openalex.org/I150229711","display_name":"University of Electronic Science and Technology of China","ror":"https://ror.org/04qr3zq92","country_code":"CN","type":"education","lineage":["https://openalex.org/I150229711"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Quan Zou","raw_affiliation_strings":["Institute of Fundamental and Frontier Sciences, University of Electronic Science and Technology of China, Chengdu, China"],"raw_orcid":"https://orcid.org/0000-0001-6406-1142","affiliations":[{"raw_affiliation_string":"Institute of Fundamental and Frontier Sciences, University of Electronic Science and Technology of China, Chengdu, China","institution_ids":["https://openalex.org/I150229711"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5010031834","https://openalex.org/A5017426085","https://openalex.org/A5079234443","https://openalex.org/A5086061723","https://openalex.org/A5100914412"],"corresponding_institution_ids":["https://openalex.org/I150229711","https://openalex.org/I180726961","https://openalex.org/I889458895","https://openalex.org/I9224756"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":0.8073,"has_fulltext":true,"cited_by_count":6,"citation_normalized_percentile":{"value":0.72395438,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"19","issue":"3","first_page":"e1010939","last_page":"e1010939"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9965000152587891,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9926999807357788,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/breast-cancer","display_name":"Breast cancer","score":0.6827576160430908},{"id":"https://openalex.org/keywords/causality","display_name":"Causality (physics)","score":0.5943735241889954},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5542595982551575},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.5461075305938721},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4920751452445984},{"id":"https://openalex.org/keywords/bayesian-probability","display_name":"Bayesian probability","score":0.47020962834358215},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.40187186002731323},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.29417359828948975},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.27663424611091614},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.21608680486679077},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.08511534333229065}],"concepts":[{"id":"https://openalex.org/C530470458","wikidata":"https://www.wikidata.org/wiki/Q128581","display_name":"Breast cancer","level":3,"score":0.6827576160430908},{"id":"https://openalex.org/C64357122","wikidata":"https://www.wikidata.org/wiki/Q1149766","display_name":"Causality (physics)","level":2,"score":0.5943735241889954},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5542595982551575},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.5461075305938721},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4920751452445984},{"id":"https://openalex.org/C107673813","wikidata":"https://www.wikidata.org/wiki/Q812534","display_name":"Bayesian probability","level":2,"score":0.47020962834358215},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.40187186002731323},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.29417359828948975},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.27663424611091614},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.21608680486679077},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.08511534333229065},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D003430","descriptor_name":"Cross-Sectional Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003430","descriptor_name":"Cross-Sectional Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003430","descriptor_name":"Cross-Sectional Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009385","descriptor_name":"Neoplastic Processes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009385","descriptor_name":"Neoplastic Processes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009385","descriptor_name":"Neoplastic Processes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016601","descriptor_name":"RNA-Binding Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016601","descriptor_name":"RNA-Binding Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016601","descriptor_name":"RNA-Binding Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016601","descriptor_name":"RNA-Binding Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D016601","descriptor_name":"RNA-Binding Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D016601","descriptor_name":"RNA-Binding Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D017398","descriptor_name":"Alternative Splicing","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017398","descriptor_name":"Alternative Splicing","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017398","descriptor_name":"Alternative Splicing","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D045744","descriptor_name":"Cell Line, Tumor","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D045744","descriptor_name":"Cell Line, Tumor","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D045744","descriptor_name":"Cell Line, Tumor","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058750","descriptor_name":"Epithelial-Mesenchymal Transition","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D058750","descriptor_name":"Epithelial-Mesenchymal Transition","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D058750","descriptor_name":"Epithelial-Mesenchymal Transition","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1371/journal.pcbi.1010939","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1010939","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1010939&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:36930678","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36930678","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10057809","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10057809","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10057809/pdf/pcbi.1010939.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:a535d4b54bee4f5f82f4e848f37adac9","is_oa":true,"landing_page_url":"https://doaj.org/article/a535d4b54bee4f5f82f4e848f37adac9","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 19, Iss 3, p e1010939 (2023)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1010939","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1010939","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1010939&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.8500000238418579,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"awards":[{"id":"https://openalex.org/G2413941631","display_name":null,"funder_award_id":"N2120003","funder_id":"https://openalex.org/F4320329696","funder_display_name":"Special Funds for the Basic Research and Development Program in the Central Non-profit Research Institutesof China"},{"id":"https://openalex.org/G4066883761","display_name":null,"funder_award_id":"2019A1515111180","funder_id":"https://openalex.org/F4320337111","funder_display_name":"Basic and Applied Basic Research Foundation of Guangdong Province"},{"id":"https://openalex.org/G6057786331","display_name":null,"funder_award_id":"62002234","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320329696","display_name":"Special Funds for the Basic Research and Development Program in the Central Non-profit Research Institutesof China","ror":null},{"id":"https://openalex.org/F4320337111","display_name":"Basic and Applied Basic Research Foundation of Guangdong Province","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4327683686.pdf","grobid_xml":"https://content.openalex.org/works/W4327683686.grobid-xml"},"referenced_works_count":80,"referenced_works":["https://openalex.org/W1818313583","https://openalex.org/W1894724448","https://openalex.org/W1964081206","https://openalex.org/W1968544359","https://openalex.org/W1968569455","https://openalex.org/W1984544688","https://openalex.org/W1990637089","https://openalex.org/W1993287310","https://openalex.org/W1995315737","https://openalex.org/W1996086117","https://openalex.org/W1997316363","https://openalex.org/W1997535872","https://openalex.org/W1998116314","https://openalex.org/W2000742696","https://openalex.org/W2011690214","https://openalex.org/W2016360721","https://openalex.org/W2029979788","https://openalex.org/W2052427812","https://openalex.org/W2054183022","https://openalex.org/W2054364834","https://openalex.org/W2054531472","https://openalex.org/W2054566879","https://openalex.org/W2058524550","https://openalex.org/W2063011414","https://openalex.org/W2063530272","https://openalex.org/W2065797952","https://openalex.org/W2071046812","https://openalex.org/W2076636899","https://openalex.org/W2103912979","https://openalex.org/W2112666597","https://openalex.org/W2119802952","https://openalex.org/W2120889859","https://openalex.org/W2133735831","https://openalex.org/W2136850043","https://openalex.org/W2155804510","https://openalex.org/W2159730169","https://openalex.org/W2160235457","https://openalex.org/W2162809957","https://openalex.org/W2166471851","https://openalex.org/W2167808312","https://openalex.org/W2295954653","https://openalex.org/W2304542741","https://openalex.org/W2308134484","https://openalex.org/W2314109998","https://openalex.org/W2315467829","https://openalex.org/W2337780126","https://openalex.org/W2339326063","https://openalex.org/W2341866024","https://openalex.org/W2344628383","https://openalex.org/W2436570678","https://openalex.org/W2482875018","https://openalex.org/W2519839815","https://openalex.org/W2601310384","https://openalex.org/W2604416127","https://openalex.org/W2735495785","https://openalex.org/W2757234574","https://openalex.org/W2807032285","https://openalex.org/W2888918698","https://openalex.org/W2897433657","https://openalex.org/W2911129797","https://openalex.org/W2943809572","https://openalex.org/W2969877525","https://openalex.org/W2973083231","https://openalex.org/W2981943921","https://openalex.org/W2988735188","https://openalex.org/W2999530967","https://openalex.org/W3002046464","https://openalex.org/W3009938892","https://openalex.org/W3032365447","https://openalex.org/W3044710794","https://openalex.org/W3046003662","https://openalex.org/W3092171409","https://openalex.org/W3108876509","https://openalex.org/W3126763236","https://openalex.org/W3133977518","https://openalex.org/W3137443677","https://openalex.org/W3156599094","https://openalex.org/W3194482250","https://openalex.org/W4200394080","https://openalex.org/W4250982861"],"related_works":["https://openalex.org/W1677090476","https://openalex.org/W2081494945","https://openalex.org/W2389053294","https://openalex.org/W1970893504","https://openalex.org/W4312071518","https://openalex.org/W2901208600","https://openalex.org/W3103491425","https://openalex.org/W830525666","https://openalex.org/W2983134435","https://openalex.org/W2330229995"],"abstract_inverted_index":{"During":[0],"breast":[1,74],"cancer":[2,75],"metastasis,":[3],"the":[4,40,60,82,89,117,134,149],"developmental":[5],"process":[6,92],"epithelial-mesenchymal":[7],"(EM)":[8],"transition":[9,18,42,68,91],"is":[10],"abnormally":[11],"activated.":[12],"Transcriptional":[13],"regulatory":[14,29,84,119,135],"networks":[15],"controlling":[16],"EM":[17,41,67,90],"are":[19,93,104,161],"well-studied;":[20],"however,":[21],"alternative":[22,51,57,122,145],"RNA":[23],"splicing":[24,35,58,123,146],"also":[25],"plays":[26],"a":[27,109],"critical":[28],"role":[30],"during":[31,66],"this":[32],"process.":[33],"Alternative":[34],"was":[36],"proved":[37],"to":[38,49,115,138],"control":[39],"process,":[43],"and":[44,59,69,101,125,157],"RNA-binding":[45,61,126,141],"proteins":[46,62,142],"were":[47],"determined":[48],"regulate":[50,64],"splicing.":[52],"A":[53],"comprehensive":[54],"understanding":[55],"of":[56,88,99,153],"that":[63],"it":[65],"their":[70],"dynamic":[71,83,118],"impact":[72],"on":[73,132],"remains":[76],"largely":[77],"unknown.":[78],"To":[79],"accurately":[80],"study":[81,129],"relationships,":[85],"time-series":[86],"data":[87,98,156],"essential.":[94],"However,":[95],"only":[96],"cross-sectional":[97],"epithelial":[100],"mesenchymal":[102],"specimens":[103],"available.":[105],"Therefore,":[106],"we":[107],"developed":[108],"pseudotemporal":[110],"causality-based":[111],"Bayesian":[112],"(PCB)":[113],"approach":[114,137],"infer":[116],"relationships":[120],"between":[121],"events":[124,147],"proteins.":[127],"Our":[128],"sheds":[130],"light":[131],"facilitating":[133],"network-based":[136],"identify":[139],"key":[140],"or":[143,151],"target":[144],"for":[148,159],"diagnosis":[150],"treatment":[152],"cancers.":[154],"The":[155],"code":[158],"PCB":[160],"available":[162],"at:":[163],"http://hkumath.hku.hk/~wkc/PCB(data+code).zip.":[164]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
