{"id":"https://openalex.org/W4323293914","doi":"https://doi.org/10.1371/journal.pcbi.1010920","title":"Physics-based tissue simulator to model multicellular systems: A study of liver regeneration and hepatocellular carcinoma recurrence","display_name":"Physics-based tissue simulator to model multicellular systems: A study of liver regeneration and hepatocellular carcinoma recurrence","publication_year":2023,"publication_date":"2023-03-06","ids":{"openalex":"https://openalex.org/W4323293914","doi":"https://doi.org/10.1371/journal.pcbi.1010920","pmid":"https://pubmed.ncbi.nlm.nih.gov/36877741"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1010920","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1010920","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1010920&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1010920&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5022296196","display_name":"Luciana Melina Luque","orcid":"https://orcid.org/0000-0002-1010-3359"},"institutions":[{"id":"https://openalex.org/I151201029","display_name":"Consejo Nacional de Investigaciones Cient\u00edficas y T\u00e9cnicas","ror":"https://ror.org/03cqe8w59","country_code":"AR","type":"government","lineage":["https://openalex.org/I151201029","https://openalex.org/I4210123736","https://openalex.org/I4387155568"]},{"id":"https://openalex.org/I4210126377","display_name":"Instituto de Fisica de Liquidos y Sistemas Biologicos","ror":"https://ror.org/030qxdf23","country_code":"AR","type":"facility","lineage":["https://openalex.org/I151201029","https://openalex.org/I4210123736","https://openalex.org/I4210126377","https://openalex.org/I4210138160","https://openalex.org/I4387155568","https://openalex.org/I874386039"]}],"countries":["AR"],"is_corresponding":true,"raw_author_name":"Luciana Melina Luque","raw_affiliation_strings":["Instituto de F\u00edsica de L\u00edquidos y Sistemas Biol\u00f3gicos - CONICET. La Plata, Argentina"],"raw_orcid":"https://orcid.org/0000-0002-1010-3359","affiliations":[{"raw_affiliation_string":"Instituto de F\u00edsica de L\u00edquidos y Sistemas Biol\u00f3gicos - CONICET. La Plata, Argentina","institution_ids":["https://openalex.org/I4210126377","https://openalex.org/I151201029"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012103174","display_name":"C. Manuel Carlevaro","orcid":"https://orcid.org/0000-0003-3528-7614"},"institutions":[{"id":"https://openalex.org/I128590013","display_name":"National Technological University","ror":"https://ror.org/04t730v47","country_code":"AR","type":"education","lineage":["https://openalex.org/I128590013"]},{"id":"https://openalex.org/I151201029","display_name":"Consejo Nacional de Investigaciones Cient\u00edficas y T\u00e9cnicas","ror":"https://ror.org/03cqe8w59","country_code":"AR","type":"government","lineage":["https://openalex.org/I151201029","https://openalex.org/I4210123736","https://openalex.org/I4387155568"]},{"id":"https://openalex.org/I4210126377","display_name":"Instituto de Fisica de Liquidos y Sistemas Biologicos","ror":"https://ror.org/030qxdf23","country_code":"AR","type":"facility","lineage":["https://openalex.org/I151201029","https://openalex.org/I4210123736","https://openalex.org/I4210126377","https://openalex.org/I4210138160","https://openalex.org/I4387155568","https://openalex.org/I874386039"]}],"countries":["AR"],"is_corresponding":true,"raw_author_name":"Carlos Manuel Carlevaro","raw_affiliation_strings":["Departamento de Ingenier\u00eda Mec\u00e1nica, Universidad Tecnol\u00f3gica Nacional, Facultad Regional La Plata, La Plata, Argentina","Instituto de F\u00edsica de L\u00edquidos y Sistemas Biol\u00f3gicos - CONICET. La Plata, Argentina"],"raw_orcid":"https://orcid.org/0000-0003-3528-7614","affiliations":[{"raw_affiliation_string":"Departamento de Ingenier\u00eda Mec\u00e1nica, Universidad Tecnol\u00f3gica Nacional, Facultad Regional La Plata, La Plata, Argentina","institution_ids":["https://openalex.org/I128590013"]},{"raw_affiliation_string":"Instituto de F\u00edsica de L\u00edquidos y Sistemas Biol\u00f3gicos - CONICET. La Plata, Argentina","institution_ids":["https://openalex.org/I4210126377","https://openalex.org/I151201029"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077490007","display_name":"Camilo Julio Llamoza-Torres","orcid":"https://orcid.org/0000-0001-8072-9413"},"institutions":[{"id":"https://openalex.org/I4210150677","display_name":"Hospital Universitario Virgen de la Arrixaca","ror":"https://ror.org/058thx797","country_code":"ES","type":"healthcare","lineage":["https://openalex.org/I4210150677"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Camilo Julio Llamoza Torres","raw_affiliation_strings":["Hospital Cl\u00ednico Universitario Virgen de la Arrixaca. Murcia, Espa\u00f1a"],"raw_orcid":"https://orcid.org/0000-0001-8072-9413","affiliations":[{"raw_affiliation_string":"Hospital Cl\u00ednico Universitario Virgen de la Arrixaca. Murcia, Espa\u00f1a","institution_ids":["https://openalex.org/I4210150677"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5014834945","display_name":"E. Lomba","orcid":"https://orcid.org/0000-0002-4768-2040"},"institutions":[{"id":"https://openalex.org/I4210147396","display_name":"Instituto de Qu\u00edmica F\u00edsica Blas Cabrera","ror":"https://ror.org/03xk60j79","country_code":"ES","type":"facility","lineage":["https://openalex.org/I134820265","https://openalex.org/I4210147396"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Enrique Lomba","raw_affiliation_strings":["Instituto de Qu\u00edmica F\u00edsica Rocasolano - CSIC. Madrid, Espa\u00f1a"],"raw_orcid":"https://orcid.org/0000-0002-4768-2040","affiliations":[{"raw_affiliation_string":"Instituto de Qu\u00edmica F\u00edsica Rocasolano - CSIC. Madrid, Espa\u00f1a","institution_ids":["https://openalex.org/I4210147396"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5012103174","https://openalex.org/A5014834945","https://openalex.org/A5022296196","https://openalex.org/A5077490007"],"corresponding_institution_ids":["https://openalex.org/I128590013","https://openalex.org/I151201029","https://openalex.org/I4210126377","https://openalex.org/I4210147396","https://openalex.org/I4210150677"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":0.8511,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.67320999,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":98},"biblio":{"volume":"19","issue":"3","first_page":"e1010920","last_page":"e1010920"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11829","display_name":"Mathematical Biology Tumor Growth","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/2611","display_name":"Modeling and Simulation"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11829","display_name":"Mathematical Biology Tumor Growth","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/2611","display_name":"Modeling and Simulation"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10966","display_name":"Liver physiology and pathology","score":0.9861999750137329,"subfield":{"id":"https://openalex.org/subfields/2721","display_name":"Hepatology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9538000226020813,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/hepatocellular-carcinoma","display_name":"Hepatocellular carcinoma","score":0.7912799119949341},{"id":"https://openalex.org/keywords/regeneration","display_name":"Regeneration (biology)","score":0.6924346685409546},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.6741818189620972},{"id":"https://openalex.org/keywords/liver-regeneration","display_name":"Liver regeneration","score":0.6184775829315186},{"id":"https://openalex.org/keywords/hepatectomy","display_name":"Hepatectomy","score":0.5868362188339233},{"id":"https://openalex.org/keywords/multicellular-organism","display_name":"Multicellular organism","score":0.524885356426239},{"id":"https://openalex.org/keywords/liver-cancer","display_name":"Liver cancer","score":0.5138757228851318},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.47539222240448},{"id":"https://openalex.org/keywords/liver-tissue","display_name":"Liver tissue","score":0.474107563495636},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.4075286388397217},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3887689411640167},{"id":"https://openalex.org/keywords/biological-system","display_name":"Biological system","score":0.3687548041343689},{"id":"https://openalex.org/keywords/biomedical-engineering","display_name":"Biomedical engineering","score":0.34426817297935486},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.33187615871429443},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.32937803864479065},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.24688374996185303},{"id":"https://openalex.org/keywords/cancer-research","display_name":"Cancer research","score":0.21724101901054382},{"id":"https://openalex.org/keywords/surgery","display_name":"Surgery","score":0.18211835622787476},{"id":"https://openalex.org/keywords/resection","display_name":"Resection","score":0.13677525520324707},{"id":"https://openalex.org/keywords/cell-biology","display_name":"Cell biology","score":0.08405506610870361},{"id":"https://openalex.org/keywords/endocrinology","display_name":"Endocrinology","score":0.08292031288146973}],"concepts":[{"id":"https://openalex.org/C2778019345","wikidata":"https://www.wikidata.org/wiki/Q1148337","display_name":"Hepatocellular carcinoma","level":2,"score":0.7912799119949341},{"id":"https://openalex.org/C171056886","wikidata":"https://www.wikidata.org/wiki/Q193119","display_name":"Regeneration (biology)","level":2,"score":0.6924346685409546},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.6741818189620972},{"id":"https://openalex.org/C2776795407","wikidata":"https://www.wikidata.org/wiki/Q19597761","display_name":"Liver regeneration","level":3,"score":0.6184775829315186},{"id":"https://openalex.org/C2776909242","wikidata":"https://www.wikidata.org/wiki/Q1514021","display_name":"Hepatectomy","level":3,"score":0.5868362188339233},{"id":"https://openalex.org/C74318829","wikidata":"https://www.wikidata.org/wiki/Q36458","display_name":"Multicellular organism","level":3,"score":0.524885356426239},{"id":"https://openalex.org/C2776231280","wikidata":"https://www.wikidata.org/wiki/Q623031","display_name":"Liver cancer","level":3,"score":0.5138757228851318},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.47539222240448},{"id":"https://openalex.org/C2992176824","wikidata":"https://www.wikidata.org/wiki/Q9368","display_name":"Liver tissue","level":2,"score":0.474107563495636},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.4075286388397217},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3887689411640167},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.3687548041343689},{"id":"https://openalex.org/C136229726","wikidata":"https://www.wikidata.org/wiki/Q327092","display_name":"Biomedical engineering","level":1,"score":0.34426817297935486},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.33187615871429443},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.32937803864479065},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.24688374996185303},{"id":"https://openalex.org/C502942594","wikidata":"https://www.wikidata.org/wiki/Q3421914","display_name":"Cancer research","level":1,"score":0.21724101901054382},{"id":"https://openalex.org/C141071460","wikidata":"https://www.wikidata.org/wiki/Q40821","display_name":"Surgery","level":1,"score":0.18211835622787476},{"id":"https://openalex.org/C159110652","wikidata":"https://www.wikidata.org/wiki/Q17078201","display_name":"Resection","level":2,"score":0.13677525520324707},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.08405506610870361},{"id":"https://openalex.org/C134018914","wikidata":"https://www.wikidata.org/wiki/Q162606","display_name":"Endocrinology","level":1,"score":0.08292031288146973},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D006498","descriptor_name":"Hepatectomy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006498","descriptor_name":"Hepatectomy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006498","descriptor_name":"Hepatectomy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006528","descriptor_name":"Carcinoma, Hepatocellular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006528","descriptor_name":"Carcinoma, Hepatocellular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006528","descriptor_name":"Carcinoma, Hepatocellular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008113","descriptor_name":"Liver Neoplasms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008113","descriptor_name":"Liver Neoplasms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008113","descriptor_name":"Liver Neoplasms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008115","descriptor_name":"Liver Regeneration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008115","descriptor_name":"Liver Regeneration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008115","descriptor_name":"Liver Regeneration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009364","descriptor_name":"Neoplasm Recurrence, Local","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009364","descriptor_name":"Neoplasm Recurrence, Local","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009364","descriptor_name":"Neoplasm Recurrence, Local","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059016","descriptor_name":"Tumor Microenvironment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059016","descriptor_name":"Tumor Microenvironment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059016","descriptor_name":"Tumor Microenvironment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1371/journal.pcbi.1010920","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1010920","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1010920&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:36877741","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36877741","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10019748","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10019748","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10019748/pdf/pcbi.1010920.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"},{"id":"pmh:oai:digital.csic.es:10261/337316","is_oa":true,"landing_page_url":"http://hdl.handle.net/10261/337316","pdf_url":null,"source":{"id":"https://openalex.org/S4306400616","display_name":"DIGITAL.CSIC (Spanish National Research Council (CSIC))","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I134820265","host_organization_name":"Consejo Superior de Investigaciones Cient\u00edficas","host_organization_lineage":["https://openalex.org/I134820265"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:doaj.org/article:bbdebce44bbb4a23a0b92d36e153123b","is_oa":true,"landing_page_url":"https://doaj.org/article/bbdebce44bbb4a23a0b92d36e153123b","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 19, Iss 3, p e1010920 (2023)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1010920","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1010920","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1010920&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.6200000047683716,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"awards":[{"id":"https://openalex.org/G2005313826","display_name":null,"funder_award_id":"2020-134-APN-DIR","funder_id":"https://openalex.org/F4320321594","funder_display_name":"Consejo Nacional de Investigaciones Cient\u00edficas y T\u00e9cnicas"},{"id":"https://openalex.org/G2064520478","display_name":"Effects of confinement on inhomogeneous systems","funder_award_id":"734276","funder_id":"https://openalex.org/F4320338337","funder_display_name":"H2020 Marie Sk\u0142odowska-Curie Actions"},{"id":"https://openalex.org/G4518290339","display_name":null,"funder_award_id":"RESOL-2020-134-APN-DIR#CONICET","funder_id":"https://openalex.org/F4320321594","funder_display_name":"Consejo Nacional de Investigaciones Cient\u00edficas y T\u00e9cnicas"},{"id":"https://openalex.org/G5375817835","display_name":null,"funder_award_id":"734276","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G687244432","display_name":null,"funder_award_id":"PID2020-115722GB-C22","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"}],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320321594","display_name":"Consejo Nacional de Investigaciones Cient\u00edficas y T\u00e9cnicas","ror":"https://ror.org/03cqe8w59"},{"id":"https://openalex.org/F4320322227","display_name":"Universidad Nacional de La Plata","ror":"https://ror.org/01tjs6929"},{"id":"https://openalex.org/F4320335598","display_name":"Agencia Estatal de Investigaci\u00f3n","ror":null},{"id":"https://openalex.org/F4320338337","display_name":"H2020 Marie Sk\u0142odowska-Curie Actions","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4323293914.pdf","grobid_xml":"https://content.openalex.org/works/W4323293914.grobid-xml"},"referenced_works_count":145,"referenced_works":["https://openalex.org/W22682603","https://openalex.org/W82764054","https://openalex.org/W85719053","https://openalex.org/W1265389026","https://openalex.org/W1498712972","https://openalex.org/W1524470428","https://openalex.org/W1549748890","https://openalex.org/W1905676497","https://openalex.org/W1921732424","https://openalex.org/W1943756471","https://openalex.org/W1964042756","https://openalex.org/W1965814195","https://openalex.org/W1967379823","https://openalex.org/W1968716491","https://openalex.org/W1972126834","https://openalex.org/W1973808490","https://openalex.org/W1983763042","https://openalex.org/W1985285668","https://openalex.org/W1985342348","https://openalex.org/W1985911638","https://openalex.org/W1987210594","https://openalex.org/W1990553788","https://openalex.org/W1994700716","https://openalex.org/W1995632296","https://openalex.org/W1996269383","https://openalex.org/W1998420703","https://openalex.org/W1998511093","https://openalex.org/W1998833753","https://openalex.org/W2001761023","https://openalex.org/W2003775437","https://openalex.org/W2004016630","https://openalex.org/W2006690205","https://openalex.org/W2010025550","https://openalex.org/W2011161139","https://openalex.org/W2011301426","https://openalex.org/W2015594324","https://openalex.org/W2020582828","https://openalex.org/W2020678429","https://openalex.org/W2027477719","https://openalex.org/W2030263511","https://openalex.org/W2031821806","https://openalex.org/W2035096179","https://openalex.org/W2035982119","https://openalex.org/W2038862693","https://openalex.org/W2040837794","https://openalex.org/W2042332837","https://openalex.org/W2045854741","https://openalex.org/W2047968138","https://openalex.org/W2048195900","https://openalex.org/W2055466365","https://openalex.org/W2056370235","https://openalex.org/W2057093021","https://openalex.org/W2061642003","https://openalex.org/W2062260782","https://openalex.org/W2063276691","https://openalex.org/W2066288526","https://openalex.org/W2066596712","https://openalex.org/W2076672259","https://openalex.org/W2077372842","https://openalex.org/W2079677140","https://openalex.org/W2088524660","https://openalex.org/W2089019762","https://openalex.org/W2090530769","https://openalex.org/W2109587553","https://openalex.org/W2119076869","https://openalex.org/W2119462662","https://openalex.org/W2120749469","https://openalex.org/W2124357987","https://openalex.org/W2124602920","https://openalex.org/W2127225632","https://openalex.org/W2137869551","https://openalex.org/W2139738991","https://openalex.org/W2140205687","https://openalex.org/W2140826070","https://openalex.org/W2146421436","https://openalex.org/W2159922381","https://openalex.org/W2163403599","https://openalex.org/W2166192049","https://openalex.org/W2167752761","https://openalex.org/W2169169493","https://openalex.org/W2169311046","https://openalex.org/W2251635988","https://openalex.org/W2256248976","https://openalex.org/W2272546316","https://openalex.org/W2283844404","https://openalex.org/W2285507676","https://openalex.org/W2293074557","https://openalex.org/W2297967082","https://openalex.org/W2315027248","https://openalex.org/W2397513198","https://openalex.org/W2398992413","https://openalex.org/W2429444364","https://openalex.org/W2434961035","https://openalex.org/W2463517602","https://openalex.org/W2465247588","https://openalex.org/W2517776083","https://openalex.org/W2551818288","https://openalex.org/W2590343780","https://openalex.org/W2591717879","https://openalex.org/W2592092817","https://openalex.org/W2597872842","https://openalex.org/W2602799623","https://openalex.org/W2742802033","https://openalex.org/W2753939078","https://openalex.org/W2770990707","https://openalex.org/W2784660883","https://openalex.org/W2790972423","https://openalex.org/W2791816571","https://openalex.org/W2808915844","https://openalex.org/W2891648284","https://openalex.org/W2910271149","https://openalex.org/W2949797623","https://openalex.org/W2968480797","https://openalex.org/W2975814872","https://openalex.org/W3008927934","https://openalex.org/W3043860344","https://openalex.org/W3047433286","https://openalex.org/W3106312086","https://openalex.org/W3123718048","https://openalex.org/W3124021984","https://openalex.org/W3138798301","https://openalex.org/W3144728562","https://openalex.org/W3165655050","https://openalex.org/W3188419868","https://openalex.org/W3192149514","https://openalex.org/W3207644942","https://openalex.org/W3213277274","https://openalex.org/W4210242473","https://openalex.org/W4210774372","https://openalex.org/W4210995852","https://openalex.org/W4211173486","https://openalex.org/W4220816453","https://openalex.org/W4221003202","https://openalex.org/W4230276156","https://openalex.org/W4234123804","https://openalex.org/W4235469020","https://openalex.org/W4236638336","https://openalex.org/W4237329722","https://openalex.org/W4240404393","https://openalex.org/W4244944373","https://openalex.org/W4247080625","https://openalex.org/W4252248121","https://openalex.org/W4254164242","https://openalex.org/W4403559015","https://openalex.org/W6600974424"],"related_works":["https://openalex.org/W2020147560","https://openalex.org/W2382085838","https://openalex.org/W4281630112","https://openalex.org/W3031051508","https://openalex.org/W1906850451","https://openalex.org/W1963455375","https://openalex.org/W2524803057","https://openalex.org/W2398538497","https://openalex.org/W2518476977","https://openalex.org/W2400543055"],"abstract_inverted_index":{"We":[0],"present":[1],"a":[2,74,127,131,161],"multiagent-based":[3],"model":[4,72,100,119,151],"that":[5],"captures":[6],"the":[7,19,22,40,53,62,65,68,103,115,124,150],"interactions":[8],"between":[9],"different":[10,112],"types":[11],"of":[12,21,43,55,67,76,79,105,126,137],"cells":[13,46],"with":[14,64,143],"their":[15,56],"microenvironment,":[16],"and":[17,29,47,82,97,145],"enables":[18],"analysis":[20],"emergent":[23],"global":[24],"behavior":[25],"during":[26],"tissue":[27,80],"regeneration":[28,81,107],"tumor":[30,83],"development.":[31],"Using":[32],"this":[33],"model,":[34],"we":[35,101],"are":[36,140],"able":[37,121],"to":[38,95,122,153],"reproduce":[39],"temporal":[41],"dynamics":[42],"regular":[44],"healthy":[45],"cancer":[48],"cells,":[49],"as":[50,52],"well":[51,159],"evolution":[54],"three-dimensional":[57],"spatial":[58,77],"distributions.":[59],"By":[60,148],"tuning":[61],"system":[63],"characteristics":[66],"individual":[69],"patients,":[70],"our":[71,99,118,138],"reproduces":[73],"variety":[75],"patterns":[78],"growth,":[84],"resembling":[85],"those":[86],"found":[87],"in":[88,111,141,167],"clinical":[89,116,146],"imaging":[90],"or":[91],"biopsies.":[92],"In":[93,114],"order":[94],"calibrate":[96],"validate":[98],"study":[102],"process":[104],"liver":[106],"after":[108,130],"surgical":[109],"hepatectomy":[110],"degrees.":[113],"context,":[117],"is":[120],"predict":[123],"recurrence":[125],"hepatocellular":[128],"carcinoma":[129],"70%":[132],"partial":[133],"hepatectomy.":[134],"The":[135],"outcomes":[136],"simulations":[139],"agreement":[142],"experimental":[144],"observations.":[147],"fitting":[149],"parameters":[152],"specific":[154],"patient":[155],"factors,":[156],"it":[157],"might":[158],"become":[160],"useful":[162],"platform":[163],"for":[164],"hypotheses":[165],"testing":[166],"treatments":[168],"protocols.":[169]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":2}],"updated_date":"2026-05-23T08:51:43.019350","created_date":"2025-10-10T00:00:00"}
