{"id":"https://openalex.org/W4312065927","doi":"https://doi.org/10.1371/journal.pcbi.1010739","title":"A method to estimate the cellular composition of the mouse brain from heterogeneous datasets","display_name":"A method to estimate the cellular composition of the mouse brain from heterogeneous datasets","publication_year":2022,"publication_date":"2022-12-21","ids":{"openalex":"https://openalex.org/W4312065927","doi":"https://doi.org/10.1371/journal.pcbi.1010739","pmid":"https://pubmed.ncbi.nlm.nih.gov/36542673"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1010739","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1010739","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1371/journal.pcbi.1010739","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5030047449","display_name":"Dimitri Rodarie","orcid":"https://orcid.org/0000-0003-2496-2311"},"institutions":[{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]}],"countries":["CH"],"is_corresponding":true,"raw_author_name":"Dimitri Rodarie","raw_affiliation_strings":["Blue Brain Project, \u00c9cole polytechnique f\u00e9d\u00e9rale de Lausanne (EPFL), Geneva, Switzerland"],"raw_orcid":"https://orcid.org/0000-0003-2496-2311","affiliations":[{"raw_affiliation_string":"Blue Brain Project, \u00c9cole polytechnique f\u00e9d\u00e9rale de Lausanne (EPFL), Geneva, Switzerland","institution_ids":["https://openalex.org/I5124864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038795577","display_name":"Csaba Veraszt\u00f3","orcid":"https://orcid.org/0000-0001-6295-7148"},"institutions":[{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Csaba Veraszt\u00f3","raw_affiliation_strings":["Blue Brain Project, \u00c9cole polytechnique f\u00e9d\u00e9rale de Lausanne (EPFL), Geneva, Switzerland"],"raw_orcid":"https://orcid.org/0000-0001-6295-7148","affiliations":[{"raw_affiliation_string":"Blue Brain Project, \u00c9cole polytechnique f\u00e9d\u00e9rale de Lausanne (EPFL), Geneva, Switzerland","institution_ids":["https://openalex.org/I5124864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064737131","display_name":"Yann Roussel","orcid":"https://orcid.org/0000-0002-2847-4502"},"institutions":[{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Yann Roussel","raw_affiliation_strings":["Blue Brain Project, \u00c9cole polytechnique f\u00e9d\u00e9rale de Lausanne (EPFL), Geneva, Switzerland"],"raw_orcid":"https://orcid.org/0000-0002-2847-4502","affiliations":[{"raw_affiliation_string":"Blue Brain Project, \u00c9cole polytechnique f\u00e9d\u00e9rale de Lausanne (EPFL), Geneva, Switzerland","institution_ids":["https://openalex.org/I5124864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090976114","display_name":"Michael Reimann","orcid":"https://orcid.org/0000-0003-3455-2367"},"institutions":[{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Michael Reimann","raw_affiliation_strings":["Blue Brain Project, \u00c9cole polytechnique f\u00e9d\u00e9rale de Lausanne (EPFL), Geneva, Switzerland"],"raw_orcid":"https://orcid.org/0000-0003-3455-2367","affiliations":[{"raw_affiliation_string":"Blue Brain Project, \u00c9cole polytechnique f\u00e9d\u00e9rale de Lausanne (EPFL), Geneva, Switzerland","institution_ids":["https://openalex.org/I5124864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064154590","display_name":"Daniel Keller","orcid":"https://orcid.org/0000-0003-3280-6255"},"institutions":[{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Daniel Keller","raw_affiliation_strings":["Blue Brain Project, \u00c9cole polytechnique f\u00e9d\u00e9rale de Lausanne (EPFL), Geneva, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Blue Brain Project, \u00c9cole polytechnique f\u00e9d\u00e9rale de Lausanne (EPFL), Geneva, Switzerland","institution_ids":["https://openalex.org/I5124864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031748394","display_name":"Srikanth Ramaswamy","orcid":null},"institutions":[{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Srikanth Ramaswamy","raw_affiliation_strings":["Blue Brain Project, \u00c9cole polytechnique f\u00e9d\u00e9rale de Lausanne (EPFL), Geneva, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Blue Brain Project, \u00c9cole polytechnique f\u00e9d\u00e9rale de Lausanne (EPFL), Geneva, Switzerland","institution_ids":["https://openalex.org/I5124864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069964239","display_name":"Henry Markram","orcid":"https://orcid.org/0000-0001-6164-2590"},"institutions":[{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Henry Markram","raw_affiliation_strings":["Blue Brain Project, \u00c9cole polytechnique f\u00e9d\u00e9rale de Lausanne (EPFL), Geneva, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Blue Brain Project, \u00c9cole polytechnique f\u00e9d\u00e9rale de Lausanne (EPFL), Geneva, Switzerland","institution_ids":["https://openalex.org/I5124864"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5039657185","display_name":"Marc-Oliver Gewaltig","orcid":"https://orcid.org/0000-0002-1566-8711"},"institutions":[{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Marc-Oliver Gewaltig","raw_affiliation_strings":["Blue Brain Project, \u00c9cole polytechnique f\u00e9d\u00e9rale de Lausanne (EPFL), Geneva, Switzerland"],"raw_orcid":"https://orcid.org/0000-0002-1566-8711","affiliations":[{"raw_affiliation_string":"Blue Brain Project, \u00c9cole polytechnique f\u00e9d\u00e9rale de Lausanne (EPFL), Geneva, Switzerland","institution_ids":["https://openalex.org/I5124864"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5030047449"],"corresponding_institution_ids":["https://openalex.org/I5124864"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":2.3422,"has_fulltext":true,"cited_by_count":32,"citation_normalized_percentile":{"value":0.89637036,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"18","issue":"12","first_page":"e1010739","last_page":"e1010739"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11266","display_name":"Neuroinflammation and Neurodegeneration Mechanisms","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/2808","display_name":"Neurology"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11266","display_name":"Neuroinflammation and Neurodegeneration Mechanisms","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/2808","display_name":"Neurology"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9916999936103821,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10077","display_name":"Neuroscience and Neuropharmacology Research","score":0.9860000014305115,"subfield":{"id":"https://openalex.org/subfields/2804","display_name":"Cellular and Molecular Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/cell-type","display_name":"Cell type","score":0.5870606899261475},{"id":"https://openalex.org/keywords/neuron","display_name":"Neuron","score":0.5757154226303101},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5752741694450378},{"id":"https://openalex.org/keywords/inhibitory-postsynaptic-potential","display_name":"Inhibitory postsynaptic potential","score":0.5565452575683594},{"id":"https://openalex.org/keywords/brain-cell","display_name":"Brain Cell","score":0.4666585624217987},{"id":"https://openalex.org/keywords/neuroscience","display_name":"Neuroscience","score":0.4658587574958801},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.45502975583076477},{"id":"https://openalex.org/keywords/parvalbumin","display_name":"Parvalbumin","score":0.43975698947906494},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.4291073977947235},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.33986207842826843},{"id":"https://openalex.org/keywords/cell","display_name":"Cell","score":0.27915018796920776},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.20411574840545654}],"concepts":[{"id":"https://openalex.org/C189014844","wikidata":"https://www.wikidata.org/wiki/Q189118","display_name":"Cell type","level":3,"score":0.5870606899261475},{"id":"https://openalex.org/C2778794669","wikidata":"https://www.wikidata.org/wiki/Q43054","display_name":"Neuron","level":2,"score":0.5757154226303101},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5752741694450378},{"id":"https://openalex.org/C17077164","wikidata":"https://www.wikidata.org/wiki/Q1185869","display_name":"Inhibitory postsynaptic potential","level":2,"score":0.5565452575683594},{"id":"https://openalex.org/C2778144876","wikidata":"https://www.wikidata.org/wiki/Q4955745","display_name":"Brain Cell","level":2,"score":0.4666585624217987},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.4658587574958801},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.45502975583076477},{"id":"https://openalex.org/C141547260","wikidata":"https://www.wikidata.org/wiki/Q2720322","display_name":"Parvalbumin","level":2,"score":0.43975698947906494},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.4291073977947235},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.33986207842826843},{"id":"https://openalex.org/C1491633281","wikidata":"https://www.wikidata.org/wiki/Q7868","display_name":"Cell","level":2,"score":0.27915018796920776},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.20411574840545654},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D002452","descriptor_name":"Cell Count","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002452","descriptor_name":"Cell Count","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002452","descriptor_name":"Cell Count","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007395","descriptor_name":"Interneurons","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D007395","descriptor_name":"Interneurons","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D007395","descriptor_name":"Interneurons","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D008822","descriptor_name":"Mice, Transgenic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008822","descriptor_name":"Mice, Transgenic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008822","descriptor_name":"Mice, Transgenic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D014660","descriptor_name":"Vasoactive Intestinal Peptide","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D014660","descriptor_name":"Vasoactive Intestinal Peptide","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D014660","descriptor_name":"Vasoactive Intestinal Peptide","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1371/journal.pcbi.1010739","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1010739","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:36542673","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36542673","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:infoscience.epfl.ch:300393","is_oa":true,"landing_page_url":"https://infoscience.epfl.ch/handle/20.500.14299/195117","pdf_url":"https://infoscience.epfl.ch/bitstreams/2cf8053a-7fa1-47ea-9bf9-c415b945adf1/download","source":{"id":"https://openalex.org/S4306400487","display_name":"Infoscience (Ecole Polytechnique F\u00e9d\u00e9rale de Lausanne)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"research article"},{"id":"pmh:oai:RePEc:plo:pcbi00:1010739","is_oa":false,"landing_page_url":"https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1010739","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},{"id":"pmh:oai:doaj.org/article:2ebb25888d704d48aa486275fe9c3689","is_oa":true,"landing_page_url":"https://doaj.org/article/2ebb25888d704d48aa486275fe9c3689","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 18, Iss 12, p e1010739 (2022)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:9838873","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9838873","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1010739","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1010739","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320320915","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052"},{"id":"https://openalex.org/F4320331149","display_name":"Board of the Swiss Federal Institutes of Technology","ror":"https://ror.org/01rvn4p91"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":94,"referenced_works":["https://openalex.org/W12856603","https://openalex.org/W221359381","https://openalex.org/W280464670","https://openalex.org/W1521981527","https://openalex.org/W1530682407","https://openalex.org/W1566289870","https://openalex.org/W1581898161","https://openalex.org/W1639561810","https://openalex.org/W1811410135","https://openalex.org/W1843983222","https://openalex.org/W1866290703","https://openalex.org/W1921182138","https://openalex.org/W1961000729","https://openalex.org/W1963788090","https://openalex.org/W1964907693","https://openalex.org/W1964948396","https://openalex.org/W1974072126","https://openalex.org/W1975389666","https://openalex.org/W1976071070","https://openalex.org/W1981348384","https://openalex.org/W1988532274","https://openalex.org/W1997570297","https://openalex.org/W2017687738","https://openalex.org/W2018250477","https://openalex.org/W2036065817","https://openalex.org/W2036253510","https://openalex.org/W2043456870","https://openalex.org/W2045629972","https://openalex.org/W2049610475","https://openalex.org/W2054337546","https://openalex.org/W2056222360","https://openalex.org/W2059078922","https://openalex.org/W2060355960","https://openalex.org/W2066101989","https://openalex.org/W2067011924","https://openalex.org/W2075450016","https://openalex.org/W2076872841","https://openalex.org/W2079523123","https://openalex.org/W2084072056","https://openalex.org/W2085261448","https://openalex.org/W2092194649","https://openalex.org/W2094000733","https://openalex.org/W2094276452","https://openalex.org/W2094717032","https://openalex.org/W2094980562","https://openalex.org/W2118510749","https://openalex.org/W2123491442","https://openalex.org/W2124659766","https://openalex.org/W2130454733","https://openalex.org/W2133059825","https://openalex.org/W2135369850","https://openalex.org/W2149423990","https://openalex.org/W2150292683","https://openalex.org/W2152756395","https://openalex.org/W2155063410","https://openalex.org/W2164858860","https://openalex.org/W2169154686","https://openalex.org/W2333846070","https://openalex.org/W2395403489","https://openalex.org/W2467209921","https://openalex.org/W2510210584","https://openalex.org/W2549935211","https://openalex.org/W2581259096","https://openalex.org/W2587344377","https://openalex.org/W2761818916","https://openalex.org/W2766229403","https://openalex.org/W2769302050","https://openalex.org/W2777126142","https://openalex.org/W2790770291","https://openalex.org/W2806998597","https://openalex.org/W2809368942","https://openalex.org/W2884786213","https://openalex.org/W2897977514","https://openalex.org/W2902084853","https://openalex.org/W2911965397","https://openalex.org/W2943413571","https://openalex.org/W2949693884","https://openalex.org/W2950976066","https://openalex.org/W2952995021","https://openalex.org/W2954525563","https://openalex.org/W2971567752","https://openalex.org/W3003257820","https://openalex.org/W3009954736","https://openalex.org/W3016474949","https://openalex.org/W3021105102","https://openalex.org/W3038024060","https://openalex.org/W3097249505","https://openalex.org/W3103145119","https://openalex.org/W3111449295","https://openalex.org/W3183158085","https://openalex.org/W3202762561","https://openalex.org/W3215926181","https://openalex.org/W4242111955","https://openalex.org/W4313544536"],"related_works":["https://openalex.org/W4381492449","https://openalex.org/W3021171993","https://openalex.org/W2071392701","https://openalex.org/W2001851145","https://openalex.org/W2124626486","https://openalex.org/W2969826625","https://openalex.org/W1996618297","https://openalex.org/W2049974903","https://openalex.org/W3108989548","https://openalex.org/W2072682605"],"abstract_inverted_index":{"The":[0,196],"mouse":[1,34,52,133],"brain":[2,75,134,234],"contains":[3],"a":[4,38,99],"rich":[5],"diversity":[6],"of":[7,18,45,60,102,115,128,202,228],"inhibitory":[8,47,70,121,139],"neuron":[9,48,71,86,122],"types":[10,29,49,186],"that":[11,126,168],"have":[12],"been":[13],"characterized":[14],"by":[15],"their":[16],"patterns":[17],"gene":[19,88],"expression.":[20],"However,":[21],"it":[22],"is":[23,181],"still":[24],"unclear":[25],"how":[26],"these":[27],"cell":[28,116,185,230],"are":[30,135,177,205],"distributed":[31],"across":[32,50],"the":[33,43,51,57,106,119,132,157,162,210,219,226],"brain.":[35,53],"We":[36,77,124,166],"developed":[37],"computational":[39],"method":[40,55],"to":[41,68,161,189,222],"estimate":[42,125],"densities":[44,72,117],"different":[46,120],"Our":[54,179],"allows":[56],"unbiased":[58],"integration":[59],"diverse":[61],"and":[62,156,200,208],"disparate":[63],"datasets":[64],"into":[65],"one":[66],"framework":[67],"predict":[69],"for":[73,118],"uncharted":[74],"regions.":[76],"constrained":[78,109],"our":[79,169,203],"estimates":[80,114],"based":[81],"on":[82,225],"previously":[83],"computed":[84],"brain-wide":[85],"densities,":[87],"expression":[89],"data":[90,188],"from":[91],"in":[92,105,131,232],"situ":[93],"hybridization":[94],"image":[95],"stacks":[96],"together":[97],"with":[98],"wide":[100],"range":[101],"values":[103,176],"reported":[104],"literature.":[107],"Using":[108],"optimization,":[110],"we":[111],"derived":[112],"coherent":[113],"types.":[123],"20.3%":[127],"all":[129,138],"neurons":[130],"inhibitory.":[136],"Among":[137],"neurons,":[140],"18%":[141],"predominantly":[142],"express":[143,147,151],"parvalbumin":[144],"(PV),":[145],"16%":[146],"somatostatin":[148],"(SST),":[149],"3%":[150],"vasoactive":[152],"intestinal":[153],"peptide":[154],"(VIP),":[155],"remainder":[158],"63%":[159],"belong":[160],"residual":[163],"GABAergic":[164],"population.":[165],"find":[167],"density":[170],"estimations":[171],"improve":[172],"as":[173,192],"more":[174],"literature":[175],"integrated.":[178],"pipeline":[180,204],"extensible,":[182],"allowing":[183],"new":[184],"or":[187],"be":[190],"integrated":[191],"they":[193],"become":[194],"available.":[195],"data,":[197],"algorithms,":[198],"software,":[199],"results":[201],"publicly":[206],"available":[207],"update":[209],"Blue":[211],"Brain":[212],"Cell":[213],"Atlas.":[214],"This":[215],"work":[216],"therefore":[217],"leverages":[218],"research":[220],"community":[221],"collectively":[223],"converge":[224],"numbers":[227],"each":[229,233],"type":[231],"region.":[235]},"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":11},{"year":2024,"cited_by_count":12},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":1}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}
