{"id":"https://openalex.org/W4307442028","doi":"https://doi.org/10.1371/journal.pcbi.1010496","title":"CHOIRBM: An R package for exploratory data analysis and interactive visualization of pain patient body map data","display_name":"CHOIRBM: An R package for exploratory data analysis and interactive visualization of pain patient body map data","publication_year":2022,"publication_date":"2022-10-27","ids":{"openalex":"https://openalex.org/W4307442028","doi":"https://doi.org/10.1371/journal.pcbi.1010496","pmid":"https://pubmed.ncbi.nlm.nih.gov/36301800"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1010496","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1010496","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1010496&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1010496&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5027296990","display_name":"Eric Cramer","orcid":"https://orcid.org/0000-0003-2085-3679"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Eric Cramer","raw_affiliation_strings":["Division of Pain Medicine, Stanford University School of Medicine, Palo Alto, California, United States of America"],"raw_orcid":"https://orcid.org/0000-0003-2085-3679","affiliations":[{"raw_affiliation_string":"Division of Pain Medicine, Stanford University School of Medicine, Palo Alto, California, United States of America","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089009097","display_name":"Maisa S. Ziadni","orcid":"https://orcid.org/0000-0001-8371-0646"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Maisa Ziadni","raw_affiliation_strings":["Division of Pain Medicine, Stanford University School of Medicine, Palo Alto, California, United States of America"],"raw_orcid":"https://orcid.org/0000-0001-8371-0646","affiliations":[{"raw_affiliation_string":"Division of Pain Medicine, Stanford University School of Medicine, Palo Alto, California, United States of America","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082084240","display_name":"Kristen Hymel Scherrer","orcid":"https://orcid.org/0000-0002-4023-1706"},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kristen Hymel Scherrer","raw_affiliation_strings":["Department of Cell Biology and Physiology, University of North Carolina at Chapel Hill School of Medicine, Chapel Hill, North Carolina, United States of America"],"raw_orcid":"https://orcid.org/0000-0002-4023-1706","affiliations":[{"raw_affiliation_string":"Department of Cell Biology and Physiology, University of North Carolina at Chapel Hill School of Medicine, Chapel Hill, North Carolina, United States of America","institution_ids":["https://openalex.org/I114027177"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000136505","display_name":"Sean Mackey","orcid":"https://orcid.org/0000-0001-7744-5348"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Sean Mackey","raw_affiliation_strings":["Division of Pain Medicine, Stanford University School of Medicine, Palo Alto, California, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Pain Medicine, Stanford University School of Medicine, Palo Alto, California, United States of America","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5002970137","display_name":"Ming\u2010Chih Kao","orcid":"https://orcid.org/0000-0001-7274-9430"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ming-Chih Kao","raw_affiliation_strings":["Division of Pain Medicine, Stanford University School of Medicine, Palo Alto, California, United States of America"],"raw_orcid":"https://orcid.org/0000-0001-7274-9430","affiliations":[{"raw_affiliation_string":"Division of Pain Medicine, Stanford University School of Medicine, Palo Alto, California, United States of America","institution_ids":["https://openalex.org/I97018004"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5000136505"],"corresponding_institution_ids":["https://openalex.org/I97018004"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":1.4163,"has_fulltext":true,"cited_by_count":13,"citation_normalized_percentile":{"value":0.81924049,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"18","issue":"10","first_page":"e1010496","last_page":"e1010496"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12267","display_name":"Diet and metabolism studies","score":0.994700014591217,"subfield":{"id":"https://openalex.org/subfields/2737","display_name":"Physiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T12267","display_name":"Diet and metabolism studies","score":0.994700014591217,"subfield":{"id":"https://openalex.org/subfields/2737","display_name":"Physiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10745","display_name":"Heart Rate Variability and Autonomic Control","score":0.9909999966621399,"subfield":{"id":"https://openalex.org/subfields/2705","display_name":"Cardiology and Cardiovascular Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11282","display_name":"Fibromyalgia and Chronic Fatigue Syndrome Research","score":0.9898999929428101,"subfield":{"id":"https://openalex.org/subfields/2738","display_name":"Psychiatry and Mental health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7665188312530518},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.6480090022087097},{"id":"https://openalex.org/keywords/modular-design","display_name":"Modular design","score":0.6097511053085327},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.45975375175476074},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.4273056983947754},{"id":"https://openalex.org/keywords/data-visualization","display_name":"Data visualization","score":0.42284905910491943},{"id":"https://openalex.org/keywords/data-mapping","display_name":"Data mapping","score":0.4195060431957245},{"id":"https://openalex.org/keywords/human\u2013computer-interaction","display_name":"Human\u2013computer interaction","score":0.40690869092941284},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.2779868245124817},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.12213370203971863},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.11756783723831177}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7665188312530518},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.6480090022087097},{"id":"https://openalex.org/C101468663","wikidata":"https://www.wikidata.org/wiki/Q1620158","display_name":"Modular design","level":2,"score":0.6097511053085327},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.45975375175476074},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.4273056983947754},{"id":"https://openalex.org/C172367668","wikidata":"https://www.wikidata.org/wiki/Q6504956","display_name":"Data visualization","level":3,"score":0.42284905910491943},{"id":"https://openalex.org/C137314826","wikidata":"https://www.wikidata.org/wiki/Q2330408","display_name":"Data mapping","level":2,"score":0.4195060431957245},{"id":"https://openalex.org/C107457646","wikidata":"https://www.wikidata.org/wiki/Q207434","display_name":"Human\u2013computer interaction","level":1,"score":0.40690869092941284},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.2779868245124817},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.12213370203971863},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.11756783723831177}],"mesh":[{"descriptor_ui":"D000078332","descriptor_name":"Data Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000078332","descriptor_name":"Data Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000078332","descriptor_name":"Data Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010146","descriptor_name":"Pain","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010146","descriptor_name":"Pain","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010146","descriptor_name":"Pain","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1371/journal.pcbi.1010496","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1010496","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1010496&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:36301800","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36301800","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:doaj.org/article:bc965e2c1b674ef5ae09835029f18de7","is_oa":true,"landing_page_url":"https://doaj.org/article/bc965e2c1b674ef5ae09835029f18de7","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 18, Iss 10, p e1010496 (2022)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:9612541","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9612541","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1010496","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1010496","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1010496&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1391714954","display_name":null,"funder_award_id":"K24NS126781","funder_id":"https://openalex.org/F4320337359","funder_display_name":"National Institute of Neurological Disorders and Stroke"},{"id":"https://openalex.org/G1617480470","display_name":null,"funder_award_id":"K24DA029262","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G1902914717","display_name":null,"funder_award_id":"K24NS126781","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G2373909690","display_name":null,"funder_award_id":"T32 DA035165","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G4224736470","display_name":null,"funder_award_id":"K23DA047473","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G4755605178","display_name":null,"funder_award_id":"DA035165","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G6842833641","display_name":null,"funder_award_id":"K24 DA029262","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G8420700051","display_name":null,"funder_award_id":"R61 NS11865","funder_id":"https://openalex.org/F4320337359","funder_display_name":"National Institute of Neurological Disorders and Stroke"}],"funders":[{"id":"https://openalex.org/F4320337347","display_name":"National Institute on Drug Abuse","ror":"https://ror.org/00fq5cm18"},{"id":"https://openalex.org/F4320337359","display_name":"National Institute of Neurological Disorders and Stroke","ror":"https://ror.org/01s5ya894"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4307442028.pdf","grobid_xml":"https://content.openalex.org/works/W4307442028.grobid-xml"},"referenced_works_count":39,"referenced_works":["https://openalex.org/W85787240","https://openalex.org/W1083694828","https://openalex.org/W1904525511","https://openalex.org/W1908118904","https://openalex.org/W1966512415","https://openalex.org/W1985670285","https://openalex.org/W1986884477","https://openalex.org/W2084518320","https://openalex.org/W2093274439","https://openalex.org/W2103241260","https://openalex.org/W2116912819","https://openalex.org/W2295957483","https://openalex.org/W2320909684","https://openalex.org/W2331694814","https://openalex.org/W2335347226","https://openalex.org/W2360955555","https://openalex.org/W2465906015","https://openalex.org/W2470649090","https://openalex.org/W2510547160","https://openalex.org/W2548317342","https://openalex.org/W2569392006","https://openalex.org/W2588774292","https://openalex.org/W2593365322","https://openalex.org/W2606182950","https://openalex.org/W2611580340","https://openalex.org/W2626854722","https://openalex.org/W2757796663","https://openalex.org/W2766366306","https://openalex.org/W2789401719","https://openalex.org/W2791018156","https://openalex.org/W2802547146","https://openalex.org/W2895664177","https://openalex.org/W2906596360","https://openalex.org/W2913068911","https://openalex.org/W2947290924","https://openalex.org/W2980769650","https://openalex.org/W3124781960","https://openalex.org/W3165802878","https://openalex.org/W3173379613"],"related_works":["https://openalex.org/W2013728941","https://openalex.org/W4225274103","https://openalex.org/W2154046714","https://openalex.org/W2189613078","https://openalex.org/W2579659702","https://openalex.org/W2923661510","https://openalex.org/W1574055964","https://openalex.org/W1965329638","https://openalex.org/W2542318691","https://openalex.org/W3160708108"],"abstract_inverted_index":{"Body":[0,90],"maps":[1],"are":[2],"commonly":[3],"used":[4],"to":[5],"capture":[6,26],"the":[7,16,21,66,76,88,104,119,133,136,148,151,164,167,174],"location":[8],"of":[9,18,41,68,78,116,135,147,166,179],"a":[10],"patient's":[11],"pain":[12,19],"and":[13,37,47,56,60,80,97,114,139,171,176],"thus":[14],"reflect":[15],"extent":[17],"throughout":[20],"body.":[22],"With":[23],"increasing":[24],"electronic":[25],"body":[27,83],"map":[28,84],"information,":[29],"there":[30],"is":[31,101,130,140],"an":[32,54],"emerging":[33],"need":[34],"for":[35],"clinic-":[36],"research-ready":[38],"tools":[39],"capable":[40],"visualizing":[42],"this":[43],"data":[44,85],"on":[45,65,103,142],"individual":[46,95],"mass":[48],"scales.":[49],"Here":[50],"we":[51],"propose":[52],"CHOIRBM,":[53],"extensible":[55],"modular":[57,168],"R":[58,106,169],"package":[59,129,149,170],"companion":[61],"web":[62],"application":[63],"built":[64,102],"grammar":[67],"graphics":[69,107],"system.":[70],"CHOIRBM":[71,100,128,162],"provides":[72],"functions":[73,153],"that":[74],"simplify":[75],"process":[77],"analyzing":[79],"plotting":[81],"patient":[82,96],"integrated":[86],"from":[87,157],"CHOIR":[89],"Map":[91],"(CBM)":[92],"at":[93],"both":[94,173],"large-dataset":[98],"levels.":[99],"popular":[105],"package,":[108],"ggplot2,":[109],"which":[110],"facilitates":[111],"further":[112],"development":[113,121,145],"addition":[115],"functionality":[117,165],"by":[118],"open-source":[120],"community":[122],"as":[123],"future":[124],"requirements":[125],"arise.":[126],"The":[127,144],"distributed":[131],"under":[132],"terms":[134],"MIT":[137],"license":[138],"available":[141],"CRAN.":[143],"version":[146],"with":[150],"latest":[152],"may":[154],"be":[155],"installed":[156],"GitHub.":[158],"Example":[159],"analysis":[160],"using":[161],"demonstrates":[163],"highlights":[172],"clinical":[175],"research":[177],"utility":[178],"efficiently":[180],"producing":[181],"CBM":[182],"visualizations.":[183]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":6},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":2}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}
