{"id":"https://openalex.org/W4295038133","doi":"https://doi.org/10.1371/journal.pcbi.1010441","title":"Utility of constraints reflecting system stability on analyses for biological models","display_name":"Utility of constraints reflecting system stability on analyses for biological models","publication_year":2022,"publication_date":"2022-09-09","ids":{"openalex":"https://openalex.org/W4295038133","doi":"https://doi.org/10.1371/journal.pcbi.1010441","pmid":"https://pubmed.ncbi.nlm.nih.gov/36084151"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1010441","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1010441","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1010441&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1010441&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5065199698","display_name":"Yoshiaki Kariya","orcid":"https://orcid.org/0000-0001-8227-2605"},"institutions":[{"id":"https://openalex.org/I4210109338","display_name":"University of Tokyo Hospital","ror":"https://ror.org/022cvpj02","country_code":"JP","type":"healthcare","lineage":["https://openalex.org/I4210109338"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Yoshiaki Kariya","raw_affiliation_strings":["Department of Pharmacy, The University of Tokyo Hospital, Faculty of Medicine, The University of Tokyo, Bunkyo-ku, Tokyo, Japan"],"raw_orcid":"https://orcid.org/0000-0001-8227-2605","affiliations":[{"raw_affiliation_string":"Department of Pharmacy, The University of Tokyo Hospital, Faculty of Medicine, The University of Tokyo, Bunkyo-ku, Tokyo, Japan","institution_ids":["https://openalex.org/I4210109338"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071851025","display_name":"Masashi Honma","orcid":null},"institutions":[{"id":"https://openalex.org/I4210109338","display_name":"University of Tokyo Hospital","ror":"https://ror.org/022cvpj02","country_code":"JP","type":"healthcare","lineage":["https://openalex.org/I4210109338"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Masashi Honma","raw_affiliation_strings":["Department of Pharmacy, The University of Tokyo Hospital, Faculty of Medicine, The University of Tokyo, Bunkyo-ku, Tokyo, Japan"],"raw_orcid":"https://orcid.org/0000-0001-8481-763X","affiliations":[{"raw_affiliation_string":"Department of Pharmacy, The University of Tokyo Hospital, Faculty of Medicine, The University of Tokyo, Bunkyo-ku, Tokyo, Japan","institution_ids":["https://openalex.org/I4210109338"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050450986","display_name":"Keita Tokuda","orcid":"https://orcid.org/0000-0002-0275-5541"},"institutions":[{"id":"https://openalex.org/I146399215","display_name":"University of Tsukuba","ror":"https://ror.org/02956yf07","country_code":"JP","type":"education","lineage":["https://openalex.org/I146399215"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Keita Tokuda","raw_affiliation_strings":["Department of Computer Science, University of Tsukuba, Tsukuba, Ibaraki, Japan"],"raw_orcid":"https://orcid.org/0000-0002-0275-5541","affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Tsukuba, Tsukuba, Ibaraki, Japan","institution_ids":["https://openalex.org/I146399215"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080907178","display_name":"Akihiko Konagaya","orcid":"https://orcid.org/0000-0001-6846-7449"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Akihiko Konagaya","raw_affiliation_strings":["Molecular Robotics Research Institute, Limited, Kyowa Create Dai-ichi, Minato-ku, Tokyo, Japan"],"raw_orcid":"https://orcid.org/0000-0001-6846-7449","affiliations":[{"raw_affiliation_string":"Molecular Robotics Research Institute, Limited, Kyowa Create Dai-ichi, Minato-ku, Tokyo, Japan","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5077377566","display_name":"Hiroshi Suzuki","orcid":"https://orcid.org/0000-0002-9730-3133"},"institutions":[{"id":"https://openalex.org/I4210109338","display_name":"University of Tokyo Hospital","ror":"https://ror.org/022cvpj02","country_code":"JP","type":"healthcare","lineage":["https://openalex.org/I4210109338"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Hiroshi Suzuki","raw_affiliation_strings":["Department of Pharmacy, The University of Tokyo Hospital, Faculty of Medicine, The University of Tokyo, Bunkyo-ku, Tokyo, Japan"],"raw_orcid":"https://orcid.org/0000-0002-9730-3133","affiliations":[{"raw_affiliation_string":"Department of Pharmacy, The University of Tokyo Hospital, Faculty of Medicine, The University of Tokyo, Bunkyo-ku, Tokyo, Japan","institution_ids":["https://openalex.org/I4210109338"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5071851025"],"corresponding_institution_ids":["https://openalex.org/I4210109338"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":0.1736,"has_fulltext":true,"cited_by_count":3,"citation_normalized_percentile":{"value":0.48367869,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":98},"biblio":{"volume":"18","issue":"9","first_page":"e1010441","last_page":"e1010441"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11178","display_name":"Receptor Mechanisms and Signaling","score":0.9969000220298767,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9965000152587891,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/parameter-space","display_name":"Parameter space","score":0.7463784217834473},{"id":"https://openalex.org/keywords/biological-system","display_name":"Biological system","score":0.6141942143440247},{"id":"https://openalex.org/keywords/stability","display_name":"Stability (learning theory)","score":0.5252896547317505},{"id":"https://openalex.org/keywords/ordinary-differential-equation","display_name":"Ordinary differential equation","score":0.4600323438644409},{"id":"https://openalex.org/keywords/applied-mathematics","display_name":"Applied mathematics","score":0.4341749846935272},{"id":"https://openalex.org/keywords/estimation-theory","display_name":"Estimation theory","score":0.4148673713207245},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.3980458378791809},{"id":"https://openalex.org/keywords/mathematical-optimization","display_name":"Mathematical optimization","score":0.3671078681945801},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3593147397041321},{"id":"https://openalex.org/keywords/control-theory","display_name":"Control theory (sociology)","score":0.332920104265213},{"id":"https://openalex.org/keywords/differential-equation","display_name":"Differential equation","score":0.24442395567893982},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.20718231797218323},{"id":"https://openalex.org/keywords/mathematical-analysis","display_name":"Mathematical analysis","score":0.18534743785858154},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.15185171365737915},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.13640308380126953}],"concepts":[{"id":"https://openalex.org/C73586568","wikidata":"https://www.wikidata.org/wiki/Q2600211","display_name":"Parameter space","level":2,"score":0.7463784217834473},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.6141942143440247},{"id":"https://openalex.org/C112972136","wikidata":"https://www.wikidata.org/wiki/Q7595718","display_name":"Stability (learning theory)","level":2,"score":0.5252896547317505},{"id":"https://openalex.org/C51544822","wikidata":"https://www.wikidata.org/wiki/Q465274","display_name":"Ordinary differential equation","level":3,"score":0.4600323438644409},{"id":"https://openalex.org/C28826006","wikidata":"https://www.wikidata.org/wiki/Q33521","display_name":"Applied mathematics","level":1,"score":0.4341749846935272},{"id":"https://openalex.org/C167928553","wikidata":"https://www.wikidata.org/wiki/Q1376021","display_name":"Estimation theory","level":2,"score":0.4148673713207245},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.3980458378791809},{"id":"https://openalex.org/C126255220","wikidata":"https://www.wikidata.org/wiki/Q141495","display_name":"Mathematical optimization","level":1,"score":0.3671078681945801},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3593147397041321},{"id":"https://openalex.org/C47446073","wikidata":"https://www.wikidata.org/wiki/Q5165890","display_name":"Control theory (sociology)","level":3,"score":0.332920104265213},{"id":"https://openalex.org/C78045399","wikidata":"https://www.wikidata.org/wiki/Q11214","display_name":"Differential equation","level":2,"score":0.24442395567893982},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.20718231797218323},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.18534743785858154},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.15185171365737915},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.13640308380126953},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.0},{"id":"https://openalex.org/C2775924081","wikidata":"https://www.wikidata.org/wiki/Q55608371","display_name":"Control (management)","level":2,"score":0.0},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000893","descriptor_name":"Anti-Inflammatory Agents","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000893","descriptor_name":"Anti-Inflammatory Agents","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000893","descriptor_name":"Anti-Inflammatory Agents","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001241","descriptor_name":"Aspirin","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D001241","descriptor_name":"Aspirin","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D001241","descriptor_name":"Aspirin","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013928","descriptor_name":"Thromboxane A2","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013928","descriptor_name":"Thromboxane A2","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013928","descriptor_name":"Thromboxane A2","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016328","descriptor_name":"NF-kappa B","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016328","descriptor_name":"NF-kappa B","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016328","descriptor_name":"NF-kappa B","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016718","descriptor_name":"Arachidonic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016718","descriptor_name":"Arachidonic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016718","descriptor_name":"Arachidonic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D044062","descriptor_name":"Prostaglandins I","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D044062","descriptor_name":"Prostaglandins I","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D044062","descriptor_name":"Prostaglandins I","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1371/journal.pcbi.1010441","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1010441","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1010441&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:36084151","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36084151","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:RePEc:plo:pcbi00:1010441","is_oa":false,"landing_page_url":"https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1010441","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},{"id":"pmh:oai:doaj.org/article:2992647b40b4446d8fb94f31e72a38ba","is_oa":true,"landing_page_url":"https://doaj.org/article/2992647b40b4446d8fb94f31e72a38ba","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 18, Iss 9, p e1010441 (2022)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:9491612","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9491612","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1010441","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1010441","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1010441&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G7553617534","display_name":null,"funder_award_id":"24249034","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G7900981282","display_name":null,"funder_award_id":"22136001","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G8543242623","display_name":null,"funder_award_id":"18H04162","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"}],"funders":[{"id":"https://openalex.org/F4320334764","display_name":"Japan Society for the Promotion of Science","ror":"https://ror.org/00hhkn466"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4295038133.pdf","grobid_xml":"https://content.openalex.org/works/W4295038133.grobid-xml"},"referenced_works_count":57,"referenced_works":["https://openalex.org/W1860242155","https://openalex.org/W1860450641","https://openalex.org/W1974450761","https://openalex.org/W1975444080","https://openalex.org/W1982528660","https://openalex.org/W1996799079","https://openalex.org/W2001620484","https://openalex.org/W2004087869","https://openalex.org/W2006672203","https://openalex.org/W2011327495","https://openalex.org/W2026995446","https://openalex.org/W2027000049","https://openalex.org/W2038264484","https://openalex.org/W2038547684","https://openalex.org/W2042065803","https://openalex.org/W2045791225","https://openalex.org/W2057364858","https://openalex.org/W2076599644","https://openalex.org/W2082664513","https://openalex.org/W2089127654","https://openalex.org/W2100837885","https://openalex.org/W2102164505","https://openalex.org/W2103507858","https://openalex.org/W2108032818","https://openalex.org/W2109295942","https://openalex.org/W2111616124","https://openalex.org/W2116252714","https://openalex.org/W2123982600","https://openalex.org/W2127419446","https://openalex.org/W2135393211","https://openalex.org/W2139478702","https://openalex.org/W2150929828","https://openalex.org/W2151019321","https://openalex.org/W2154401739","https://openalex.org/W2165240999","https://openalex.org/W2166337262","https://openalex.org/W2205473914","https://openalex.org/W2274070243","https://openalex.org/W2434961035","https://openalex.org/W2586633795","https://openalex.org/W2592082128","https://openalex.org/W2604836793","https://openalex.org/W2621184382","https://openalex.org/W2760516132","https://openalex.org/W2791999253","https://openalex.org/W2884341428","https://openalex.org/W2891428319","https://openalex.org/W2912714001","https://openalex.org/W2914135414","https://openalex.org/W2947494173","https://openalex.org/W2960312893","https://openalex.org/W3045955831","https://openalex.org/W4211017114","https://openalex.org/W4212883601","https://openalex.org/W4238014472","https://openalex.org/W4248721357","https://openalex.org/W4252269258"],"related_works":["https://openalex.org/W1998254728","https://openalex.org/W2069805373","https://openalex.org/W2810607982","https://openalex.org/W4399435637","https://openalex.org/W1987771408","https://openalex.org/W2042934151","https://openalex.org/W2905630886","https://openalex.org/W2612639608","https://openalex.org/W2023661646","https://openalex.org/W2066489961"],"abstract_inverted_index":{"Simulating":[0],"complex":[1],"biological":[2,123,274,298],"models":[3,275],"consisting":[4],"of":[5,15,27,41,48,95,117,179,202,218,228,297],"multiple":[6],"ordinary":[7],"differential":[8],"equations":[9],"can":[10,285],"aid":[11],"in":[12,157,176,240,287],"the":[13,16,25,32,39,79,82,96,100,118,131,147,163,169,177,180,209,219,226,229,235,253,267,278,282,295],"prediction":[14],"pharmacological/biological":[17],"responses;":[18],"however,":[19],"they":[20],"are":[21,70,264],"often":[22],"hampered":[23],"by":[24,91,213,224],"availability":[26],"reliable":[28],"kinetic":[29,49],"parameters.":[30],"In":[31,166,233],"present":[33],"study,":[34],"we":[35,76,109,153],"aimed":[36],"to":[37,58,130,145,196,242,251,259,266],"discover":[38],"properties":[40,217,296],"behaviors":[42],"without":[43],"determining":[44],"an":[45,111],"optimal":[46],"combination":[47],"parameter":[50,62,120,158,172,182,210,231,279,291],"values":[51,173],"(parameter":[52],"set).":[53],"The":[54,184,199,215],"key":[55],"idea":[56],"was":[57,190],"collect":[59],"as":[60,64,192],"many":[61,68],"sets":[63,211,280,292],"possible.":[65],"Given":[66],"that":[67,247,277],"systems":[69,124],"biologically":[71,289],"stable":[72],"and":[73,85,103,143,293],"resilient":[74],"(BSR),":[75],"focused":[77,97],"on":[78,272],"dynamics":[80],"around":[81],"steady":[83],"state":[84],"formulated":[86],"objective":[87,101],"functions":[88,102],"for":[89,113,122],"BSR":[90,148,164,283],"partial":[92],"linear":[93],"approximation":[94],"region.":[98],"Using":[99],"modified":[104],"global":[105],"cluster":[106],"Newton":[107],"method,":[108],"developed":[110],"algorithm":[112],"a":[114,138,193],"thorough":[115],"exploration":[116],"allowable":[119],"space":[121,159],"(TEAPS).":[125],"We":[126],"first":[127],"applied":[128],"TEAPS":[129],"NF-\u03baB":[132],"signaling":[133],"model.":[134],"This":[135],"system":[136,220],"shows":[137],"damped":[139],"oscillation":[140],"after":[141],"stimulation":[142],"seems":[144],"fit":[146],"constraint.":[149],"By":[150],"applying":[151],"TEAPS,":[152],"found":[154],"several":[155],"directions":[156],"which":[160],"stringently":[161],"determines":[162],"property.":[165],"such":[167,246],"directions,":[168],"experimentally":[170],"fitted":[171],"were":[174,206,221],"included":[175],"range":[178],"obtained":[181,212,230],"sets.":[183,232],"arachidonic":[185],"acid":[186],"metabolic":[187],"pathway":[188],"model":[189,194],"used":[191],"related":[195],"pharmacological":[197,200],"responses.":[198],"effects":[201],"nonsteroidal":[203],"anti-inflammatory":[204],"drugs":[205],"simulated":[207],"using":[208],"TEAPS.":[214],"structural":[216],"partly":[222],"extracted":[223],"analyzing":[225],"distribution":[227],"addition,":[234],"simulations":[236],"showed":[237],"inter-drug":[238],"differences":[239],"prostacyclin":[241],"thromboxane":[243],"A2":[244],"ratio":[245],"aspirin":[248],"treatment":[249,257],"tends":[250,258],"increase":[252],"ratio,":[254],"while":[255],"rofecoxib":[256],"decrease":[260],"it.":[261],"These":[262,270],"trends":[263],"comparable":[265],"clinical":[268],"observations.":[269],"results":[271],"real":[273],"suggest":[276],"satisfying":[281],"condition":[284],"help":[286],"finding":[288],"plausible":[290],"understanding":[294],"systems.":[299]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2024,"cited_by_count":2}],"updated_date":"2026-03-27T05:58:40.876381","created_date":"2025-10-10T00:00:00"}
