{"id":"https://openalex.org/W4323653645","doi":"https://doi.org/10.1371/journal.pcbi.1010342","title":"Detection of genes with differential expression dispersion unravels the role of autophagy in cancer progression","display_name":"Detection of genes with differential expression dispersion unravels the role of autophagy in cancer progression","publication_year":2023,"publication_date":"2023-03-09","ids":{"openalex":"https://openalex.org/W4323653645","doi":"https://doi.org/10.1371/journal.pcbi.1010342","pmid":"https://pubmed.ncbi.nlm.nih.gov/36893104"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1010342","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1010342","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1371/journal.pcbi.1010342","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5089749184","display_name":"Christophe Le Priol","orcid":"https://orcid.org/0000-0002-9411-0176"},"institutions":[{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I2738703131","display_name":"Commissariat \u00e0 l'\u00c9nergie Atomique et aux \u00c9nergies Alternatives","ror":"https://ror.org/00jjx8s55","country_code":"FR","type":"government","lineage":["https://openalex.org/I2738703131"]},{"id":"https://openalex.org/I3020098449","display_name":"CEA Grenoble","ror":"https://ror.org/02mg6n827","country_code":"FR","type":"government","lineage":["https://openalex.org/I2738703131","https://openalex.org/I3020098449"]},{"id":"https://openalex.org/I4210091409","display_name":"Institut de Recherche Interdisciplinaire de Grenoble","ror":"https://ror.org/00byxdz40","country_code":"FR","type":"government","lineage":["https://openalex.org/I2738703131","https://openalex.org/I2738703131","https://openalex.org/I4210091409","https://openalex.org/I4210113668"]},{"id":"https://openalex.org/I4210156758","display_name":"Institut de G\u00e9nomique Fonctionnelle","ror":"https://ror.org/043wmc583","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I19894307","https://openalex.org/I4210096427","https://openalex.org/I4210156758"]},{"id":"https://openalex.org/I899635006","display_name":"Universit\u00e9 Grenoble Alpes","ror":"https://ror.org/02rx3b187","country_code":"FR","type":"education","lineage":["https://openalex.org/I899635006"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Christophe Le Priol","raw_affiliation_strings":["Univ. Grenoble Alpes, INSERM, CEA-IRIG, Biomics, Grenoble, France","IRIG - Institut de Recherche Interdisciplinaire de Grenoble (France)","BIOMICS - Biomicrotechnologie et g\u00e9nomique fonctionnelle (17 rue des Martyrs 38054 Grenoble cedex - France)"],"affiliations":[{"raw_affiliation_string":"Univ. Grenoble Alpes, INSERM, CEA-IRIG, Biomics, Grenoble, France","institution_ids":["https://openalex.org/I899635006","https://openalex.org/I154526488","https://openalex.org/I3020098449","https://openalex.org/I2738703131"]},{"raw_affiliation_string":"IRIG - Institut de Recherche Interdisciplinaire de Grenoble (France)","institution_ids":["https://openalex.org/I4210091409"]},{"raw_affiliation_string":"BIOMICS - Biomicrotechnologie et g\u00e9nomique fonctionnelle (17 rue des Martyrs 38054 Grenoble cedex - France)","institution_ids":["https://openalex.org/I4210156758"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5114376683","display_name":"Chlo\u00e9\u2010Agathe Azencott","orcid":"https://orcid.org/0000-0003-1003-301X"},"institutions":[{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I2746051580","display_name":"Universit\u00e9 Paris Sciences et Lettres","ror":"https://ror.org/013cjyk83","country_code":"FR","type":"education","lineage":["https://openalex.org/I2746051580"]},{"id":"https://openalex.org/I4210113863","display_name":"G\u00e9nomique Bioinformatique et Applications","ror":"https://ror.org/0264vhs54","country_code":"FR","type":"facility","lineage":["https://openalex.org/I124158823","https://openalex.org/I4210113863","https://openalex.org/I4210134562"]},{"id":"https://openalex.org/I4387153074","display_name":"Cancer et g\u00e9nome: Bioinformatique, biostatistiques et \u00e9pid\u00e9miologie des syst\u00e8mes complexes","ror":"https://ror.org/0095dt357","country_code":null,"type":"facility","lineage":["https://openalex.org/I154526488","https://openalex.org/I190752583","https://openalex.org/I2746051580","https://openalex.org/I2746051580","https://openalex.org/I4387153074","https://openalex.org/I70768539","https://openalex.org/I80043"]},{"id":"https://openalex.org/I70768539","display_name":"\u00c9cole Nationale Sup\u00e9rieure des Mines de Paris","ror":"https://ror.org/04y8cs423","country_code":"FR","type":"education","lineage":["https://openalex.org/I190752583","https://openalex.org/I2746051580","https://openalex.org/I70768539"]},{"id":"https://openalex.org/I80043","display_name":"Institut Curie","ror":"https://ror.org/04t0gwh46","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I80043"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Chlo\u00e9-Agathe Azencott","raw_affiliation_strings":["Center for Computational Biology, Mines ParisTech, PSL Research University, Paris, France","INSERM U900, Paris, France","Institut Curie, Paris, France","CBIO - Centre de Bioinformatique (35 rue Saint-Honor\u00e9 77300 Fontainebleau, France - France)","Cancer et g\u00e9nome: Bioinformatique, biostatistiques et \u00e9pid\u00e9miologie d'un syst\u00e8me complexe (26 rue d'Ulm - 75248 Paris cedex 05 - France)"],"affiliations":[{"raw_affiliation_string":"Center for Computational Biology, Mines ParisTech, PSL Research University, Paris, France","institution_ids":["https://openalex.org/I2746051580","https://openalex.org/I70768539"]},{"raw_affiliation_string":"INSERM U900, Paris, France","institution_ids":["https://openalex.org/I154526488"]},{"raw_affiliation_string":"Institut Curie, Paris, France","institution_ids":["https://openalex.org/I80043"]},{"raw_affiliation_string":"CBIO - Centre de Bioinformatique (35 rue Saint-Honor\u00e9 77300 Fontainebleau, France - France)","institution_ids":[]},{"raw_affiliation_string":"Cancer et g\u00e9nome: Bioinformatique, biostatistiques et \u00e9pid\u00e9miologie d'un syst\u00e8me complexe (26 rue d'Ulm - 75248 Paris cedex 05 - France)","institution_ids":["https://openalex.org/I4210113863","https://openalex.org/I4387153074"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5090218857","display_name":"Xavier Gidrol","orcid":"https://orcid.org/0000-0002-4233-3749"},"institutions":[{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I2738703131","display_name":"Commissariat \u00e0 l'\u00c9nergie Atomique et aux \u00c9nergies Alternatives","ror":"https://ror.org/00jjx8s55","country_code":"FR","type":"government","lineage":["https://openalex.org/I2738703131"]},{"id":"https://openalex.org/I3020098449","display_name":"CEA Grenoble","ror":"https://ror.org/02mg6n827","country_code":"FR","type":"government","lineage":["https://openalex.org/I2738703131","https://openalex.org/I3020098449"]},{"id":"https://openalex.org/I4210091409","display_name":"Institut de Recherche Interdisciplinaire de Grenoble","ror":"https://ror.org/00byxdz40","country_code":"FR","type":"government","lineage":["https://openalex.org/I2738703131","https://openalex.org/I2738703131","https://openalex.org/I4210091409","https://openalex.org/I4210113668"]},{"id":"https://openalex.org/I4210156758","display_name":"Institut de G\u00e9nomique Fonctionnelle","ror":"https://ror.org/043wmc583","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I19894307","https://openalex.org/I4210096427","https://openalex.org/I4210156758"]},{"id":"https://openalex.org/I899635006","display_name":"Universit\u00e9 Grenoble Alpes","ror":"https://ror.org/02rx3b187","country_code":"FR","type":"education","lineage":["https://openalex.org/I899635006"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Xavier Gidrol","raw_affiliation_strings":["Univ. Grenoble Alpes, INSERM, CEA-IRIG, Biomics, Grenoble, France","BIOMICS - Biomicrotechnologie et g\u00e9nomique fonctionnelle (17 rue des Martyrs 38054 Grenoble cedex - France)","IRIG - Institut de Recherche Interdisciplinaire de Grenoble (France)"],"affiliations":[{"raw_affiliation_string":"Univ. Grenoble Alpes, INSERM, CEA-IRIG, Biomics, Grenoble, France","institution_ids":["https://openalex.org/I899635006","https://openalex.org/I154526488","https://openalex.org/I3020098449","https://openalex.org/I2738703131"]},{"raw_affiliation_string":"BIOMICS - Biomicrotechnologie et g\u00e9nomique fonctionnelle (17 rue des Martyrs 38054 Grenoble cedex - France)","institution_ids":["https://openalex.org/I4210156758"]},{"raw_affiliation_string":"IRIG - Institut de Recherche Interdisciplinaire de Grenoble (France)","institution_ids":["https://openalex.org/I4210091409"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5089749184"],"corresponding_institution_ids":["https://openalex.org/I154526488","https://openalex.org/I2738703131","https://openalex.org/I3020098449","https://openalex.org/I4210091409","https://openalex.org/I4210156758","https://openalex.org/I899635006"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"EUR","value_usd":2863},"fwci":0.1543,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.56762898,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"19","issue":"3","first_page":"e1010342","last_page":"e1010342"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9944999814033508,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9943000078201294,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5964094996452332},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5859875679016113},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.5842278599739075},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.5722573399543762},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5546532869338989},{"id":"https://openalex.org/keywords/rna-seq","display_name":"RNA-Seq","score":0.4908507466316223},{"id":"https://openalex.org/keywords/microrna","display_name":"microRNA","score":0.47152838110923767},{"id":"https://openalex.org/keywords/expression","display_name":"Expression (computer science)","score":0.45328453183174133},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.3768587112426758},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3674500584602356},{"id":"https://openalex.org/keywords/transcriptome","display_name":"Transcriptome","score":0.2732082009315491},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.16902750730514526}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5964094996452332},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5859875679016113},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.5842278599739075},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.5722573399543762},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5546532869338989},{"id":"https://openalex.org/C107397762","wikidata":"https://www.wikidata.org/wiki/Q2542347","display_name":"RNA-Seq","level":5,"score":0.4908507466316223},{"id":"https://openalex.org/C145059251","wikidata":"https://www.wikidata.org/wiki/Q310899","display_name":"microRNA","level":3,"score":0.47152838110923767},{"id":"https://openalex.org/C90559484","wikidata":"https://www.wikidata.org/wiki/Q778379","display_name":"Expression (computer science)","level":2,"score":0.45328453183174133},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3768587112426758},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3674500584602356},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.2732082009315491},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.16902750730514526},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D001343","descriptor_name":"Autophagy","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001343","descriptor_name":"Autophagy","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001343","descriptor_name":"Autophagy","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1371/journal.pcbi.1010342","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1010342","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:36893104","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36893104","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:9997931","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9997931","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC9997931/pdf/pcbi.1010342.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"},{"id":"pmh:oai:HAL:hal-03901624v1","is_oa":false,"landing_page_url":"https://minesparis-psl.hal.science/hal-03901624","pdf_url":null,"source":{"id":"https://openalex.org/S4406922466","display_name":"SPIRE - Sciences Po Institutional REpository","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1010342","raw_type":"Journal articles"},{"id":"pmh:oai:RePEc:plo:pcbi00:1010342","is_oa":false,"landing_page_url":"https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1010342","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},{"id":"pmh:oai:doaj.org/article:e7aba5e4d85d4568a8a6818ddb0e328b","is_oa":true,"landing_page_url":"https://doaj.org/article/e7aba5e4d85d4568a8a6818ddb0e328b","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 19, Iss 3, p e1010342 (2023)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1010342","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1010342","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.5600000023841858,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320313937","display_name":"Universit\u00e9 Grenoble Alpes","ror":"https://ror.org/02rx3b187"},{"id":"https://openalex.org/F4320320893","display_name":"Institut National de la Sant\u00e9 et de la Recherche M\u00e9dicale","ror":"https://ror.org/02vjkv261"},{"id":"https://openalex.org/F4320323911","display_name":"Commissariat \u00e0 l'\u00c9nergie Atomique et aux \u00c9nergies Alternatives","ror":"https://ror.org/00jjx8s55"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":74,"referenced_works":["https://openalex.org/W1576726980","https://openalex.org/W1589771869","https://openalex.org/W1596515083","https://openalex.org/W1644145788","https://openalex.org/W1732324184","https://openalex.org/W1963740134","https://openalex.org/W1964356021","https://openalex.org/W1964486421","https://openalex.org/W1964608340","https://openalex.org/W1971962952","https://openalex.org/W1976752968","https://openalex.org/W1979302584","https://openalex.org/W1987012261","https://openalex.org/W1994018858","https://openalex.org/W2003788015","https://openalex.org/W2020596227","https://openalex.org/W2021429824","https://openalex.org/W2022590976","https://openalex.org/W2027455260","https://openalex.org/W2030832538","https://openalex.org/W2032065412","https://openalex.org/W2035618305","https://openalex.org/W2036099163","https://openalex.org/W2037330932","https://openalex.org/W2040664117","https://openalex.org/W2058358568","https://openalex.org/W2061958715","https://openalex.org/W2074299722","https://openalex.org/W2074414424","https://openalex.org/W2101268168","https://openalex.org/W2101458260","https://openalex.org/W2105512180","https://openalex.org/W2107018762","https://openalex.org/W2107342968","https://openalex.org/W2110017531","https://openalex.org/W2110065044","https://openalex.org/W2114104545","https://openalex.org/W2121211805","https://openalex.org/W2121343862","https://openalex.org/W2121633536","https://openalex.org/W2125974203","https://openalex.org/W2130116522","https://openalex.org/W2132980978","https://openalex.org/W2133755000","https://openalex.org/W2135256913","https://openalex.org/W2141425631","https://openalex.org/W2141925314","https://openalex.org/W2145416275","https://openalex.org/W2148847151","https://openalex.org/W2150575159","https://openalex.org/W2164963807","https://openalex.org/W2165909549","https://openalex.org/W2167882141","https://openalex.org/W2168278787","https://openalex.org/W2177489649","https://openalex.org/W2179438025","https://openalex.org/W2236822143","https://openalex.org/W2333651975","https://openalex.org/W2409924512","https://openalex.org/W2528811213","https://openalex.org/W2570629027","https://openalex.org/W2582676576","https://openalex.org/W2610537770","https://openalex.org/W2618676107","https://openalex.org/W2740618823","https://openalex.org/W2746479894","https://openalex.org/W2775443868","https://openalex.org/W2791997421","https://openalex.org/W2900821772","https://openalex.org/W2920970571","https://openalex.org/W3125115489","https://openalex.org/W3193762322","https://openalex.org/W4205643011","https://openalex.org/W4211017114"],"related_works":["https://openalex.org/W2737319532","https://openalex.org/W4392896533","https://openalex.org/W2062945643","https://openalex.org/W2050308539","https://openalex.org/W4394426846","https://openalex.org/W3151405604","https://openalex.org/W2565797512","https://openalex.org/W3002447856","https://openalex.org/W2057742104","https://openalex.org/W4283692078"],"abstract_inverted_index":{"The":[0,134],"majority":[1],"of":[2,22,82,110,164,175,194],"gene":[3,37],"expression":[4,14,28,38,79,127,146],"studies":[5],"focus":[6],"on":[7,113],"the":[8,25,47,57,61,98,108,141,176,192,195],"search":[9],"for":[10],"genes":[11,123,142],"whose":[12,185],"mean":[13,78,99,155],"is":[15,63,189],"different":[16],"between":[17,80],"two":[18],"or":[19],"more":[20],"populations":[21],"samples":[23],"in":[24,34,36,77,96,102,148,154,173,187],"so-called":[26],"\"differential":[27],"analysis\"":[29],"approach.":[30],"However,":[31],"a":[32,67,75,125,152],"difference":[33,76],"variance":[35],"may":[39],"also":[40],"be":[41,70],"biologically":[42],"and":[43,100,116,150,170,206],"physiologically":[44],"relevant.":[45],"In":[46,179],"classical":[48],"statistical":[49],"model":[50],"used":[51],"to":[52,69,73,87,120,133,168,199,207],"analyze":[53],"RNA-sequencing":[54],"(RNA-seq)":[55],"data,":[56],"dispersion,":[58],"which":[59,93,165],"defines":[60],"variance,":[62],"only":[64],"considered":[65],"as":[66],"parameter":[68,118],"estimated":[71],"prior":[72],"identifying":[74],"conditions":[81],"interest.":[83],"Here,":[84],"we":[85,157],"propose":[86],"evaluate":[88],"four":[89],"recently":[90],"published":[91],"methods,":[92],"detect":[94,122],"differences":[95],"both":[97],"dispersion":[101,147,197],"RNA-seq":[103],"data.":[104],"We":[105,129],"thoroughly":[106],"investigated":[107],"performance":[109],"these":[111,131],"methods":[112,132],"simulated":[114],"datasets":[115],"characterized":[117],"settings":[119],"reliably":[121],"with":[124,143],"differential":[126,196],"dispersion.":[128],"applied":[130],"Cancer":[135],"Genome":[136],"Atlas":[137],"datasets.":[138],"Interestingly,":[139],"among":[140],"an":[144],"increased":[145],"tumors":[149],"without":[151],"change":[153],"expression,":[156],"identified":[158],"some":[159],"key":[160],"cellular":[161],"functions,":[162],"most":[163,174],"were":[166,171],"related":[167],"catabolism":[169],"overrepresented":[172],"analyzed":[177],"cancers.":[178],"particular,":[180],"our":[181],"results":[182],"highlight":[183],"autophagy,":[184],"role":[186],"cancerogenesis":[188],"context-dependent,":[190],"illustrating":[191],"potential":[193],"approach":[198],"gain":[200],"new":[201,209],"insights":[202],"into":[203],"biological":[204],"processes":[205],"discover":[208],"biomarkers.":[210]},"counts_by_year":[{"year":2024,"cited_by_count":1}],"updated_date":"2026-03-27T14:29:43.386196","created_date":"2025-10-10T00:00:00"}
