{"id":"https://openalex.org/W4286008086","doi":"https://doi.org/10.1371/journal.pcbi.1010308","title":"Modeling scenarios for mitigating outbreaks in congregate settings","display_name":"Modeling scenarios for mitigating outbreaks in congregate settings","publication_year":2022,"publication_date":"2022-07-20","ids":{"openalex":"https://openalex.org/W4286008086","doi":"https://doi.org/10.1371/journal.pcbi.1010308","pmid":"https://pubmed.ncbi.nlm.nih.gov/35857774"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1010308","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1010308","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1010308&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1010308&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5043576357","display_name":"Seth Blumberg","orcid":"https://orcid.org/0000-0001-5495-4238"},"institutions":[{"id":"https://openalex.org/I1289490764","display_name":"Centers for Disease Control and Prevention","ror":"https://ror.org/042twtr12","country_code":"US","type":"funder","lineage":["https://openalex.org/I1289490764","https://openalex.org/I1299022934"]},{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]},{"id":"https://openalex.org/I2802636490","display_name":"San Francisco Foundation","ror":"https://ror.org/046jh9k27","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I2802636490"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Seth Blumberg","raw_affiliation_strings":["Modeling Infectious Diseases in Healthcare Network, Centers for Disease Control and Prevention, Atlanta, Georgia, United States of America","University of California San Francisco, Department of Medicine, San Francisco, California, United States of America","University of California San Francisco, Francis I. Proctor Foundation, San Francisco, California, United States of America"],"affiliations":[{"raw_affiliation_string":"Modeling Infectious Diseases in Healthcare Network, Centers for Disease Control and Prevention, Atlanta, Georgia, United States of America","institution_ids":["https://openalex.org/I1289490764"]},{"raw_affiliation_string":"University of California San Francisco, Department of Medicine, San Francisco, California, United States of America","institution_ids":["https://openalex.org/I180670191"]},{"raw_affiliation_string":"University of California San Francisco, Francis I. Proctor Foundation, San Francisco, California, United States of America","institution_ids":["https://openalex.org/I2802636490","https://openalex.org/I180670191"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047581157","display_name":"Phoebe Lu","orcid":null},"institutions":[{"id":"https://openalex.org/I1289490764","display_name":"Centers for Disease Control and Prevention","ror":"https://ror.org/042twtr12","country_code":"US","type":"funder","lineage":["https://openalex.org/I1289490764","https://openalex.org/I1299022934"]},{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]},{"id":"https://openalex.org/I2802636490","display_name":"San Francisco Foundation","ror":"https://ror.org/046jh9k27","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I2802636490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Phoebe Lu","raw_affiliation_strings":["Modeling Infectious Diseases in Healthcare Network, Centers for Disease Control and Prevention, Atlanta, Georgia, United States of America","University of California San Francisco, Francis I. Proctor Foundation, San Francisco, California, United States of America"],"affiliations":[{"raw_affiliation_string":"Modeling Infectious Diseases in Healthcare Network, Centers for Disease Control and Prevention, Atlanta, Georgia, United States of America","institution_ids":["https://openalex.org/I1289490764"]},{"raw_affiliation_string":"University of California San Francisco, Francis I. Proctor Foundation, San Francisco, California, United States of America","institution_ids":["https://openalex.org/I2802636490","https://openalex.org/I180670191"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061892680","display_name":"Ada Kwan","orcid":"https://orcid.org/0000-0003-4889-9433"},"institutions":[{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ada T. Kwan","raw_affiliation_strings":["University of California San Francisco, Department of Medicine, San Francisco, California, United States of America"],"affiliations":[{"raw_affiliation_string":"University of California San Francisco, Department of Medicine, San Francisco, California, United States of America","institution_ids":["https://openalex.org/I180670191"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041923408","display_name":"Christopher M. Hoover","orcid":"https://orcid.org/0000-0003-1976-8493"},"institutions":[{"id":"https://openalex.org/I1289490764","display_name":"Centers for Disease Control and Prevention","ror":"https://ror.org/042twtr12","country_code":"US","type":"funder","lineage":["https://openalex.org/I1289490764","https://openalex.org/I1299022934"]},{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]},{"id":"https://openalex.org/I2802636490","display_name":"San Francisco Foundation","ror":"https://ror.org/046jh9k27","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I2802636490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Christopher M. Hoover","raw_affiliation_strings":["Modeling Infectious Diseases in Healthcare Network, Centers for Disease Control and Prevention, Atlanta, Georgia, United States of America","University of California San Francisco, Francis I. Proctor Foundation, San Francisco, California, United States of America"],"affiliations":[{"raw_affiliation_string":"Modeling Infectious Diseases in Healthcare Network, Centers for Disease Control and Prevention, Atlanta, Georgia, United States of America","institution_ids":["https://openalex.org/I1289490764"]},{"raw_affiliation_string":"University of California San Francisco, Francis I. Proctor Foundation, San Francisco, California, United States of America","institution_ids":["https://openalex.org/I2802636490","https://openalex.org/I180670191"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052657259","display_name":"James O. Lloyd\u2010Smith","orcid":"https://orcid.org/0000-0001-7941-502X"},"institutions":[{"id":"https://openalex.org/I161318765","display_name":"University of California, Los Angeles","ror":"https://ror.org/046rm7j60","country_code":"US","type":"education","lineage":["https://openalex.org/I161318765"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"James O. Lloyd-Smith","raw_affiliation_strings":["University of California Los Angeles, Department of Ecology and Evolutionary Biology, Los Angeles, California, United States of America"],"affiliations":[{"raw_affiliation_string":"University of California Los Angeles, Department of Ecology and Evolutionary Biology, Los Angeles, California, United States of America","institution_ids":["https://openalex.org/I161318765"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086843422","display_name":"David Sears","orcid":"https://orcid.org/0000-0003-3854-6482"},"institutions":[{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"David Sears","raw_affiliation_strings":["University of California San Francisco, Department of Medicine, San Francisco, California, United States of America"],"affiliations":[{"raw_affiliation_string":"University of California San Francisco, Department of Medicine, San Francisco, California, United States of America","institution_ids":["https://openalex.org/I180670191"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063104847","display_name":"Stefano Bertozzi","orcid":"https://orcid.org/0000-0002-1723-7085"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I4210128723","display_name":"Instituto Nacional de Salud P\u00fablica","ror":"https://ror.org/032y0n460","country_code":"MX","type":"government","lineage":["https://openalex.org/I4210095685","https://openalex.org/I4210128723"]},{"id":"https://openalex.org/I95457486","display_name":"University of California, Berkeley","ror":"https://ror.org/01an7q238","country_code":"US","type":"education","lineage":["https://openalex.org/I95457486"]}],"countries":["MX","US"],"is_corresponding":false,"raw_author_name":"Stefano M. Bertozzi","raw_affiliation_strings":["National Institute of Public Health of Mexico, Cuernavaca, Mexico","University of California Berkeley, School of Public Health, Berkeley, California, United States of America","University of Washington, Department of Global Health, Seattle, Washington, United States of America"],"affiliations":[{"raw_affiliation_string":"National Institute of Public Health of Mexico, Cuernavaca, Mexico","institution_ids":["https://openalex.org/I4210128723"]},{"raw_affiliation_string":"University of California Berkeley, School of Public Health, Berkeley, California, United States of America","institution_ids":["https://openalex.org/I95457486"]},{"raw_affiliation_string":"University of Washington, Department of Global Health, Seattle, Washington, United States of America","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5091689131","display_name":"Lee Worden","orcid":"https://orcid.org/0000-0001-9799-0183"},"institutions":[{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]},{"id":"https://openalex.org/I2802636490","display_name":"San Francisco Foundation","ror":"https://ror.org/046jh9k27","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I2802636490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lee Worden","raw_affiliation_strings":["University of California San Francisco, Francis I. Proctor Foundation, San Francisco, California, United States of America"],"affiliations":[{"raw_affiliation_string":"University of California San Francisco, Francis I. Proctor Foundation, San Francisco, California, United States of America","institution_ids":["https://openalex.org/I2802636490","https://openalex.org/I180670191"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5043576357"],"corresponding_institution_ids":["https://openalex.org/I1289490764","https://openalex.org/I180670191","https://openalex.org/I2802636490"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":1.9174,"has_fulltext":true,"cited_by_count":16,"citation_normalized_percentile":{"value":0.84921418,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":98,"max":99},"biblio":{"volume":"18","issue":"7","first_page":"e1010308","last_page":"e1010308"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10410","display_name":"COVID-19 epidemiological studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/2611","display_name":"Modeling and Simulation"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10410","display_name":"COVID-19 epidemiological studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/2611","display_name":"Modeling and Simulation"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11581","display_name":"Viral Infections and Outbreaks Research","score":0.9886999726295471,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10747","display_name":"Disaster Management and Resilience","score":0.9797000288963318,"subfield":{"id":"https://openalex.org/subfields/3312","display_name":"Sociology and Political Science"},"field":{"id":"https://openalex.org/fields/33","display_name":"Social Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/outbreak","display_name":"Outbreak","score":0.5996554493904114},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4531151056289673},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.42527350783348083},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.21641525626182556},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.21338552236557007}],"concepts":[{"id":"https://openalex.org/C116675565","wikidata":"https://www.wikidata.org/wiki/Q3241045","display_name":"Outbreak","level":2,"score":0.5996554493904114},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4531151056289673},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.42527350783348083},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.21641525626182556},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.21338552236557007}],"mesh":[{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":true},{"descriptor_ui":"D004196","descriptor_name":"Disease Outbreaks","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":false},{"descriptor_ui":"D004196","descriptor_name":"Disease Outbreaks","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":false},{"descriptor_ui":"D004196","descriptor_name":"Disease Outbreaks","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":false},{"descriptor_ui":"D004196","descriptor_name":"Disease Outbreaks","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":false},{"descriptor_ui":"D004196","descriptor_name":"Disease Outbreaks","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":false},{"descriptor_ui":"D004196","descriptor_name":"Disease Outbreaks","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":false},{"descriptor_ui":"D004196","descriptor_name":"Disease Outbreaks","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":false},{"descriptor_ui":"D004196","descriptor_name":"Disease Outbreaks","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009735","descriptor_name":"Nursing Homes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009735","descriptor_name":"Nursing Homes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009735","descriptor_name":"Nursing Homes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009735","descriptor_name":"Nursing Homes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009735","descriptor_name":"Nursing Homes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009735","descriptor_name":"Nursing Homes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009735","descriptor_name":"Nursing Homes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009735","descriptor_name":"Nursing Homes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014611","descriptor_name":"Vaccination","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014611","descriptor_name":"Vaccination","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014611","descriptor_name":"Vaccination","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014611","descriptor_name":"Vaccination","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014611","descriptor_name":"Vaccination","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014611","descriptor_name":"Vaccination","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014611","descriptor_name":"Vaccination","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014611","descriptor_name":"Vaccination","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017053","descriptor_name":"Infection Control","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017053","descriptor_name":"Infection Control","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017053","descriptor_name":"Infection Control","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017053","descriptor_name":"Infection Control","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017053","descriptor_name":"Infection Control","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017053","descriptor_name":"Infection Control","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017053","descriptor_name":"Infection Control","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017053","descriptor_name":"Infection Control","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1371/journal.pcbi.1010308","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1010308","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1010308&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:35857774","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35857774","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:ark:/13030/qt7qq9s46s","is_oa":false,"landing_page_url":null,"pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null},{"id":"pmh:oai:doaj.org/article:77e19fd0aa2a4bf6bd950248515485c5","is_oa":true,"landing_page_url":"https://doaj.org/article/77e19fd0aa2a4bf6bd950248515485c5","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 18, Iss 7, p e1010308 (2022)","raw_type":"article"},{"id":"pmh:oai:escholarship.org:ark:/13030/qt7qq9s46s","is_oa":true,"landing_page_url":"https://escholarship.org/uc/item/7qq9s46s","pdf_url":null,"source":{"id":"https://openalex.org/S4306400115","display_name":"eScholarship (California Digital Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2801248553","host_organization_name":"California Digital Library","host_organization_lineage":["https://openalex.org/I2801248553"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS computational biology, vol 18, iss 7","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:9342784","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9342784","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1010308","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1010308","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1010308&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.7699999809265137,"id":"https://metadata.un.org/sdg/3"}],"awards":[{"id":"https://openalex.org/G2371584397","display_name":null,"funder_award_id":"CDC U01CK000590","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G257758517","display_name":null,"funder_award_id":"K12 EY031372","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G3611247453","display_name":null,"funder_award_id":"R01GM","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G3804219375","display_name":null,"funder_award_id":"K12 EY031372","funder_id":"https://openalex.org/F4320337350","funder_display_name":"National Eye Institute"},{"id":"https://openalex.org/G3817782108","display_name":null,"funder_award_id":"R01GM130900","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G5241415837","display_name":null,"funder_award_id":"NIH K12","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G6835582147","display_name":null,"funder_award_id":"U01CK000590","funder_id":"https://openalex.org/F4320332162","funder_display_name":"Centers for Disease Control and Prevention"},{"id":"https://openalex.org/G8288036582","display_name":null,"funder_award_id":"NIH R01","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320332162","display_name":"Centers for Disease Control and Prevention","ror":"https://ror.org/042twtr12"},{"id":"https://openalex.org/F4320337350","display_name":"National Eye Institute","ror":"https://ror.org/03wkg3b53"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4286008086.pdf","grobid_xml":"https://content.openalex.org/works/W4286008086.grobid-xml"},"referenced_works_count":39,"referenced_works":["https://openalex.org/W1982251560","https://openalex.org/W2010365240","https://openalex.org/W2020182439","https://openalex.org/W2035886603","https://openalex.org/W2069251911","https://openalex.org/W2079458878","https://openalex.org/W2094740420","https://openalex.org/W2110204999","https://openalex.org/W2130457392","https://openalex.org/W2519290674","https://openalex.org/W2734790791","https://openalex.org/W2914002714","https://openalex.org/W2962847904","https://openalex.org/W3010233963","https://openalex.org/W3010781325","https://openalex.org/W3013233995","https://openalex.org/W3014725674","https://openalex.org/W3015537027","https://openalex.org/W3015571324","https://openalex.org/W3017085637","https://openalex.org/W3018807993","https://openalex.org/W3021112975","https://openalex.org/W3023023888","https://openalex.org/W3032969757","https://openalex.org/W3038063455","https://openalex.org/W3041115643","https://openalex.org/W3046950965","https://openalex.org/W3084226083","https://openalex.org/W3084301924","https://openalex.org/W3087356468","https://openalex.org/W3089975294","https://openalex.org/W3092430350","https://openalex.org/W3105224959","https://openalex.org/W3111614902","https://openalex.org/W3112934818","https://openalex.org/W3148330193","https://openalex.org/W4200044874","https://openalex.org/W4232030042","https://openalex.org/W6726908622"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2373635223","https://openalex.org/W2412355096","https://openalex.org/W1990012352","https://openalex.org/W2431766951","https://openalex.org/W4385969441","https://openalex.org/W127458931","https://openalex.org/W2362266265"],"abstract_inverted_index":{"The":[0,214],"explosive":[1],"outbreaks":[2,199],"of":[3,36,43,50,86,99,108,115,121,125,133,152,160,172,197,206,230,238,261,337],"COVID-19":[4],"seen":[5],"in":[6,96,257,293,318,343],"congregate":[7,319],"settings":[8],"such":[9],"as":[10,61,92,303],"prisons":[11],"and":[12,24,123,130,195,288,323],"nursing":[13],"homes,":[14],"has":[15,270],"highlighted":[16],"a":[17,62,68,78,93,113,143,157,204,311,329],"critical":[18],"need":[19],"for":[20,27,84,306,314],"effective":[21,279],"outbreak":[22,232,241,269,344],"prevention":[23],"mitigation":[25],"strategies":[26],"these":[28,308],"settings.":[29,320,345],"Here":[30],"we":[31,165],"consider":[32],"how":[33,307],"different":[34,219],"types":[35,132],"control":[37,255,276,342],"interventions":[38],"impact":[39,336],"the":[40,53,57,97,102,106,118,149,170,173,193,202,223,228,235,259,281,298,334],"expected":[41,150,236],"number":[42,98,151,159,237,260,283],"symptomatic":[44,109],"infections":[45],"due":[46],"to":[47,67,191,226,251,273,332],"outbreaks.":[48],"Introduction":[49],"disease":[51,180,198,254,316],"into":[52,210],"resident":[54],"population":[55,175],"from":[56,240],"community":[58],"is":[59,75,90,225,264,277,284,290],"modeled":[60,76,91],"stochastic":[63],"point":[64],"process":[65],"coupled":[66],"branching":[69],"process,":[70],"while":[71],"spread":[72],"between":[73],"residents":[74,207],"via":[77],"deterministic":[79],"compartmental":[80],"model":[81],"that":[82,137,167],"accounts":[83],"depletion":[85],"susceptible":[87,100,174,262],"individuals.":[88],"Control":[89],"proportional":[94],"decrease":[95],"residents,":[101],"reproduction":[103,158,282],"number,":[104],"and/or":[105],"proportion":[107],"infections.":[110],"This":[111],"permits":[112],"range":[114],"assumptions":[116],"about":[117],"density":[119],"dependence":[120],"transmission":[122,317],"modes":[124],"protection":[126],"by":[127,176,182,200],"vaccination,":[128],"depopulation":[129,140],"other":[131,244],"control.":[134,295],"We":[135,296],"find":[136,166],"vaccination":[138],"or":[139,234],"can":[141],"have":[142],"greater":[144],"than":[145],"linear":[146],"effect":[147],"on":[148,221],"cases.":[153],"For":[154],"example,":[155],"assuming":[156],"3.0":[161],"with":[162],"density-dependent":[163],"transmission,":[164],"preemptively":[168],"reducing":[169],"size":[171],"20%":[177],"reduced":[178,266],"overall":[179],"burden":[181,196],"47%.":[183],"In":[184,243],"some":[185],"circumstances,":[186],"it":[187],"may":[188,217,247],"be":[189,218,248],"possible":[190],"reduce":[192,227],"risk":[194],"optimizing":[201],"way":[203],"group":[205],"are":[208],"apportioned":[209],"distinct":[211],"residential":[212],"units.":[213],"optimal":[215],"apportionment":[216],"depending":[220],"whether":[222],"goal":[224],"probability":[229],"an":[231,249,268,304],"occurring,":[233],"cases":[239],"dynamics.":[242],"circumstances":[245],"there":[246,289],"opportunity":[250],"implement":[252],"reactive":[253],"measures":[256],"which":[258],"individuals":[263],"rapidly":[265],"once":[267],"been":[271],"detected":[272],"occur.":[274],"Reactive":[275],"most":[278],"when":[280],"not":[285],"too":[286],"high,":[287],"minimal":[291],"delay":[292],"implementing":[294],"highlight":[297],"California":[299],"state":[300],"prison":[301],"system":[302],"example":[305],"findings":[309],"provide":[310],"quantitative":[312,330],"framework":[313,331],"understanding":[315],"Our":[321],"approach":[322],"accompanying":[324],"interactive":[325],"website":[326],"(https://phoebelu.shinyapps.io/DepopulationModels/)":[327],"provides":[328],"evaluate":[333],"potential":[335],"policy":[338],"decisions":[339],"governing":[340],"infection":[341]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2024,"cited_by_count":8},{"year":2023,"cited_by_count":6}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
