{"id":"https://openalex.org/W4212974503","doi":"https://doi.org/10.1371/journal.pcbi.1009876","title":"Multi-omics data integration reveals metabolome as the top predictor of the cervicovaginal microenvironment","display_name":"Multi-omics data integration reveals metabolome as the top predictor of the cervicovaginal microenvironment","publication_year":2022,"publication_date":"2022-02-23","ids":{"openalex":"https://openalex.org/W4212974503","doi":"https://doi.org/10.1371/journal.pcbi.1009876","pmid":"https://pubmed.ncbi.nlm.nih.gov/35196323"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1009876","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1009876","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1009876&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1009876&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5000165682","display_name":"Nicholas A. Bokulich","orcid":"https://orcid.org/0000-0002-1784-8935"},"institutions":[{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Nicholas A. Bokulich","raw_affiliation_strings":["Laboratory of Food Systems Biotechnology, Institute of Food, Nutrition, and Health, ETH Z\u00fcrich, Switzerland"],"raw_orcid":"https://orcid.org/0000-0002-1784-8935","affiliations":[{"raw_affiliation_string":"Laboratory of Food Systems Biotechnology, Institute of Food, Nutrition, and Health, ETH Z\u00fcrich, Switzerland","institution_ids":["https://openalex.org/I35440088"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046024274","display_name":"Pawe\u0142 \u0141aniewski","orcid":"https://orcid.org/0000-0002-5190-2173"},"institutions":[{"id":"https://openalex.org/I138006243","display_name":"University of Arizona","ror":"https://ror.org/03m2x1q45","country_code":"US","type":"education","lineage":["https://openalex.org/I138006243"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Pawe\u0142 \u0141aniewski","raw_affiliation_strings":["Department of Basic Medical Sciences, College of Medicine-Phoenix, University of Arizona, Phoenix, Arizona, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Basic Medical Sciences, College of Medicine-Phoenix, University of Arizona, Phoenix, Arizona, United States of America","institution_ids":["https://openalex.org/I138006243"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082470569","display_name":"A. K. Adamov","orcid":"https://orcid.org/0000-0002-7506-1583"},"institutions":[{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Anja Adamov","raw_affiliation_strings":["Laboratory of Food Systems Biotechnology, Institute of Food, Nutrition, and Health, ETH Z\u00fcrich, Switzerland"],"raw_orcid":"https://orcid.org/0000-0002-7506-1583","affiliations":[{"raw_affiliation_string":"Laboratory of Food Systems Biotechnology, Institute of Food, Nutrition, and Health, ETH Z\u00fcrich, Switzerland","institution_ids":["https://openalex.org/I35440088"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025133222","display_name":"Dana M. Chase","orcid":"https://orcid.org/0000-0002-1073-8688"},"institutions":[{"id":"https://openalex.org/I4210162453","display_name":"Arizona Oncology","ror":"https://ror.org/05c1xy536","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210162453"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Dana M. Chase","raw_affiliation_strings":["Arizona Oncology, Phoenix, Arizona, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Arizona Oncology, Phoenix, Arizona, United States of America","institution_ids":["https://openalex.org/I4210162453"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038626201","display_name":"J. Gregory Caporaso","orcid":"https://orcid.org/0000-0002-8865-1670"},"institutions":[{"id":"https://openalex.org/I203172682","display_name":"Northern Arizona University","ror":"https://ror.org/0272j5188","country_code":"US","type":"education","lineage":["https://openalex.org/I203172682"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"J. Gregory Caporaso","raw_affiliation_strings":["Center for Applied Microbiome Science, Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, Arizona, United States of America"],"raw_orcid":"https://orcid.org/0000-0002-8865-1670","affiliations":[{"raw_affiliation_string":"Center for Applied Microbiome Science, Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, Arizona, United States of America","institution_ids":["https://openalex.org/I203172682"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5002269357","display_name":"Melissa M. Herbst\u2010Kralovetz","orcid":"https://orcid.org/0000-0002-8540-5917"},"institutions":[{"id":"https://openalex.org/I138006243","display_name":"University of Arizona","ror":"https://ror.org/03m2x1q45","country_code":"US","type":"education","lineage":["https://openalex.org/I138006243"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Melissa M. Herbst-Kralovetz","raw_affiliation_strings":["Department of Basic Medical Sciences, College of Medicine-Phoenix, University of Arizona, Phoenix, Arizona, United States of America","Department of Obstetrics and Gynecology, College of Medicine-Phoenix, University of Arizona, Phoenix, Arizona, United States of America"],"raw_orcid":"https://orcid.org/0000-0002-8540-5917","affiliations":[{"raw_affiliation_string":"Department of Basic Medical Sciences, College of Medicine-Phoenix, University of Arizona, Phoenix, Arizona, United States of America","institution_ids":["https://openalex.org/I138006243"]},{"raw_affiliation_string":"Department of Obstetrics and Gynecology, College of Medicine-Phoenix, University of Arizona, Phoenix, Arizona, United States of America","institution_ids":["https://openalex.org/I138006243"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5002269357"],"corresponding_institution_ids":["https://openalex.org/I138006243"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":10.5911,"has_fulltext":true,"cited_by_count":67,"citation_normalized_percentile":{"value":0.99008341,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":97,"max":100},"biblio":{"volume":"18","issue":"2","first_page":"e1009876","last_page":"e1009876"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10146","display_name":"Cervical Cancer and HPV Research","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10146","display_name":"Cervical Cancer and HPV Research","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10428","display_name":"Reproductive tract infections research","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/2404","display_name":"Microbiology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10418","display_name":"Pelvic floor disorders treatments","score":0.9509000182151794,"subfield":{"id":"https://openalex.org/subfields/2745","display_name":"Rheumatology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/metabolome","display_name":"Metabolome","score":0.9087109565734863},{"id":"https://openalex.org/keywords/microbiome","display_name":"Microbiome","score":0.7125727534294128},{"id":"https://openalex.org/keywords/metabolomics","display_name":"Metabolomics","score":0.6891716122627258},{"id":"https://openalex.org/keywords/omics","display_name":"Omics","score":0.6361348628997803},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.6067562699317932},{"id":"https://openalex.org/keywords/immune-system","display_name":"Immune system","score":0.5409896969795227},{"id":"https://openalex.org/keywords/carcinogenesis","display_name":"Carcinogenesis","score":0.5199636220932007},{"id":"https://openalex.org/keywords/inflammation","display_name":"Inflammation","score":0.5008912086486816},{"id":"https://openalex.org/keywords/biomarker","display_name":"Biomarker","score":0.46099451184272766},{"id":"https://openalex.org/keywords/biomarker-discovery","display_name":"Biomarker discovery","score":0.44444137811660767},{"id":"https://openalex.org/keywords/tumor-microenvironment","display_name":"Tumor microenvironment","score":0.43326735496520996},{"id":"https://openalex.org/keywords/cervical-cancer","display_name":"Cervical cancer","score":0.426962673664093},{"id":"https://openalex.org/keywords/vagina","display_name":"Vagina","score":0.42412757873535156},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.42104285955429077},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.35852086544036865},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3442731499671936},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.34401610493659973},{"id":"https://openalex.org/keywords/immunology","display_name":"Immunology","score":0.31957679986953735},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.27902278304100037},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.21297535300254822},{"id":"https://openalex.org/keywords/proteomics","display_name":"Proteomics","score":0.13284632563591003},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.11318057775497437}],"concepts":[{"id":"https://openalex.org/C135870905","wikidata":"https://www.wikidata.org/wiki/Q903667","display_name":"Metabolome","level":3,"score":0.9087109565734863},{"id":"https://openalex.org/C143121216","wikidata":"https://www.wikidata.org/wiki/Q1330402","display_name":"Microbiome","level":2,"score":0.7125727534294128},{"id":"https://openalex.org/C21565614","wikidata":"https://www.wikidata.org/wiki/Q12149006","display_name":"Metabolomics","level":2,"score":0.6891716122627258},{"id":"https://openalex.org/C157585117","wikidata":"https://www.wikidata.org/wiki/Q158666","display_name":"Omics","level":2,"score":0.6361348628997803},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6067562699317932},{"id":"https://openalex.org/C8891405","wikidata":"https://www.wikidata.org/wiki/Q1059","display_name":"Immune system","level":2,"score":0.5409896969795227},{"id":"https://openalex.org/C555283112","wikidata":"https://www.wikidata.org/wiki/Q1637543","display_name":"Carcinogenesis","level":3,"score":0.5199636220932007},{"id":"https://openalex.org/C2776914184","wikidata":"https://www.wikidata.org/wiki/Q101991","display_name":"Inflammation","level":2,"score":0.5008912086486816},{"id":"https://openalex.org/C2781197716","wikidata":"https://www.wikidata.org/wiki/Q864574","display_name":"Biomarker","level":2,"score":0.46099451184272766},{"id":"https://openalex.org/C124535831","wikidata":"https://www.wikidata.org/wiki/Q4915074","display_name":"Biomarker discovery","level":4,"score":0.44444137811660767},{"id":"https://openalex.org/C2776107976","wikidata":"https://www.wikidata.org/wiki/Q1786433","display_name":"Tumor microenvironment","level":3,"score":0.43326735496520996},{"id":"https://openalex.org/C2778220009","wikidata":"https://www.wikidata.org/wiki/Q160105","display_name":"Cervical cancer","level":3,"score":0.426962673664093},{"id":"https://openalex.org/C2777744392","wikidata":"https://www.wikidata.org/wiki/Q5880","display_name":"Vagina","level":2,"score":0.42412757873535156},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.42104285955429077},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.35852086544036865},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3442731499671936},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.34401610493659973},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.31957679986953735},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.27902278304100037},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.21297535300254822},{"id":"https://openalex.org/C46111723","wikidata":"https://www.wikidata.org/wiki/Q471857","display_name":"Proteomics","level":3,"score":0.13284632563591003},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.11318057775497437},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007249","descriptor_name":"Inflammation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007249","descriptor_name":"Inflammation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007249","descriptor_name":"Inflammation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014621","descriptor_name":"Vagina","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014621","descriptor_name":"Vagina","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014621","descriptor_name":"Vagina","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055442","descriptor_name":"Metabolome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055442","descriptor_name":"Metabolome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055442","descriptor_name":"Metabolome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059016","descriptor_name":"Tumor Microenvironment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059016","descriptor_name":"Tumor Microenvironment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059016","descriptor_name":"Tumor Microenvironment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D063646","descriptor_name":"Carcinogenesis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D063646","descriptor_name":"Carcinogenesis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D063646","descriptor_name":"Carcinogenesis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":7,"locations":[{"id":"doi:10.1371/journal.pcbi.1009876","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1009876","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1009876&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:35196323","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35196323","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:repository.arizona.edu:10150/663857","is_oa":true,"landing_page_url":"http://hdl.handle.net/10150/663857","pdf_url":null,"source":{"id":"https://openalex.org/S4306400271","display_name":"UA Campus Repository (The University of Arizona)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I138006243","host_organization_name":"University of Arizona","host_organization_lineage":["https://openalex.org/I138006243"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"PLoS Computational Biology","raw_type":"text"},{"id":"pmh:oai:doaj.org/article:ee1cc76221764a50b6c146450928f3cd","is_oa":true,"landing_page_url":"https://doaj.org/article/ee1cc76221764a50b6c146450928f3cd","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 18, Iss 2, p e1009876 (2022)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:8901057","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8901057","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"},{"id":"pmh:oai:www.research-collection.ethz.ch:20.500.11850/535697","is_oa":true,"landing_page_url":"http://hdl.handle.net/20.500.11850/535697","pdf_url":null,"source":{"id":"https://openalex.org/S4306402302","display_name":"Repository for Publications and Research Data (ETH Zurich)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I35440088","host_organization_name":"ETH Zurich","host_organization_lineage":["https://openalex.org/I35440088"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, 18 (2)","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"doi:10.3929/ethz-b-000535697","is_oa":true,"landing_page_url":"https://doi.org/10.3929/ethz-b-000535697","pdf_url":null,"source":{"id":"https://openalex.org/S7407051236","display_name":"ETH Z\u00fcrich Research Collection","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article-journal"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1009876","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1009876","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1009876&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1241018058","display_name":null,"funder_award_id":"U54CA143924","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"},{"id":"https://openalex.org/G126493064","display_name":null,"funder_award_id":"#2244","funder_id":"https://openalex.org/F4320306335","funder_display_name":"Flinn Foundation"},{"id":"https://openalex.org/G1970963762","display_name":null,"funder_award_id":"U54CA143925","funder_id":"https://openalex.org/F4320309707","funder_display_name":"University of Arizona Cancer Center"},{"id":"https://openalex.org/G4679101085","display_name":null,"funder_award_id":"U54CA143924","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G4864707165","display_name":null,"funder_award_id":"1U24CA248454-01","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"},{"id":"https://openalex.org/G7266066198","display_name":null,"funder_award_id":"U54CA143925","funder_id":"https://openalex.org/F4320309684","funder_display_name":"Division of Cancer Prevention, National Cancer Institute"},{"id":"https://openalex.org/G7752234114","display_name":null,"funder_award_id":"1U24CA248454-01","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G8274236412","display_name":null,"funder_award_id":"U54CA143924","funder_id":"https://openalex.org/F4320309684","funder_display_name":"Division of Cancer Prevention, National Cancer Institute"},{"id":"https://openalex.org/G8308081115","display_name":null,"funder_award_id":"U54CA143925","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"}],"funders":[{"id":"https://openalex.org/F4320306335","display_name":"Flinn Foundation","ror":"https://ror.org/058qtek75"},{"id":"https://openalex.org/F4320309684","display_name":"Division of Cancer Prevention, National Cancer Institute","ror":"https://ror.org/040gcmg81"},{"id":"https://openalex.org/F4320309707","display_name":"University of Arizona Cancer Center","ror":"https://ror.org/03m2x1q45"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337351","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4212974503.pdf","grobid_xml":"https://content.openalex.org/works/W4212974503.grobid-xml"},"referenced_works_count":81,"referenced_works":["https://openalex.org/W1811186957","https://openalex.org/W1926422794","https://openalex.org/W1969732431","https://openalex.org/W1992027363","https://openalex.org/W1998951533","https://openalex.org/W2011301426","https://openalex.org/W2013371150","https://openalex.org/W2027297424","https://openalex.org/W2047455878","https://openalex.org/W2048201362","https://openalex.org/W2062761055","https://openalex.org/W2065342949","https://openalex.org/W2071589972","https://openalex.org/W2072087747","https://openalex.org/W2088268917","https://openalex.org/W2097493772","https://openalex.org/W2111415362","https://openalex.org/W2115190531","https://openalex.org/W2127621564","https://openalex.org/W2135785255","https://openalex.org/W2136432779","https://openalex.org/W2152821355","https://openalex.org/W2154026962","https://openalex.org/W2158353135","https://openalex.org/W2166632132","https://openalex.org/W2170027067","https://openalex.org/W2201127965","https://openalex.org/W2259627284","https://openalex.org/W2270337160","https://openalex.org/W2311142656","https://openalex.org/W2321804599","https://openalex.org/W2342602136","https://openalex.org/W2401404581","https://openalex.org/W2476742596","https://openalex.org/W2552883321","https://openalex.org/W2559683962","https://openalex.org/W2582447685","https://openalex.org/W2605928190","https://openalex.org/W2735369591","https://openalex.org/W2747619000","https://openalex.org/W2758767377","https://openalex.org/W2766612280","https://openalex.org/W2771925862","https://openalex.org/W2783722756","https://openalex.org/W2786546763","https://openalex.org/W2796210912","https://openalex.org/W2798920980","https://openalex.org/W2806769319","https://openalex.org/W2807194798","https://openalex.org/W2808805770","https://openalex.org/W2889019390","https://openalex.org/W2892881193","https://openalex.org/W2898490392","https://openalex.org/W2904635536","https://openalex.org/W2911964244","https://openalex.org/W2929854681","https://openalex.org/W2941842978","https://openalex.org/W2945348578","https://openalex.org/W2953236953","https://openalex.org/W2954162762","https://openalex.org/W2954610371","https://openalex.org/W2955245499","https://openalex.org/W2958564218","https://openalex.org/W2963276645","https://openalex.org/W2964487836","https://openalex.org/W2966376468","https://openalex.org/W2975619549","https://openalex.org/W2977433364","https://openalex.org/W2979981494","https://openalex.org/W2987653794","https://openalex.org/W2990249310","https://openalex.org/W2990640021","https://openalex.org/W2993250673","https://openalex.org/W3007674389","https://openalex.org/W3013498851","https://openalex.org/W3018767052","https://openalex.org/W3037620181","https://openalex.org/W3040245690","https://openalex.org/W3044813747","https://openalex.org/W3046931682","https://openalex.org/W3213732104"],"related_works":["https://openalex.org/W1996644818","https://openalex.org/W1965468642","https://openalex.org/W2093500216","https://openalex.org/W2053588008","https://openalex.org/W2916376502","https://openalex.org/W3101161779","https://openalex.org/W423371831","https://openalex.org/W2777729175","https://openalex.org/W2260452057","https://openalex.org/W4295779760"],"abstract_inverted_index":{"Emerging":[0],"evidence":[1],"suggests":[2],"that":[3,103,140],"host-microbe":[4],"interaction":[5],"in":[6,59,134,208],"the":[7,36,126,143,220],"cervicovaginal":[8,37,60],"microenvironment":[9,38],"contributes":[10],"to":[11,31,91,164],"cervical":[12,75,135,168],"carcinogenesis,":[13],"yet":[14],"dissecting":[15],"these":[16],"complex":[17],"interactions":[18,94],"is":[19],"challenging.":[20],"Herein,":[21],"we":[22,138,213],"performed":[23],"an":[24],"integrated":[25,100],"analysis":[26],"of":[27,35,43,69,142,157,167,179,193,198],"multiple":[28],"\"omics\"":[29],"datasets":[30],"develop":[32,96],"predictive":[33,97,156,166],"models":[34],"and":[39,48,55,84,95,105,119,130,145,152,185,201,224],"identify":[40],"characteristic":[41],"features":[42,141],"vaginal":[44,52,127,199,202,221,225],"microbiome,":[45,128],"genital":[46,131,158,194,231],"inflammation":[47,132,159,232],"disease":[49,170],"status.":[50,171],"Microbiomes,":[51],"pH,":[53],"immunoproteomes":[54],"metabolomes":[56],"were":[57,89,109,175,190],"measured":[58],"specimens":[61],"collected":[62],"from":[63],"a":[64],"cohort":[65],"(n":[66],"=":[67],"72)":[68],"Arizonan":[70],"women":[71],"with":[72,219],"or":[73],"without":[74],"neoplasm.":[76],"Multi-omics":[77],"integration":[78],"methods,":[79],"including":[80,148],"neural":[81],"networks":[82],"(mmvec)":[83],"Random":[85,113],"Forest":[86,114],"supervised":[87],"learning,":[88],"utilized":[90],"explore":[92],"potential":[93],"models.":[98],"Our":[99],"analyses":[101],"revealed":[102],"immune":[104,153,216],"cancer":[106],"biomarker":[107],"concentrations":[108],"reliably":[110],"predicted":[111],"by":[112],"regressors":[115],"trained":[116],"on":[117,206],"microbial":[118,150],"metabolic":[120],"features,":[121],"suggesting":[122],"close":[123],"correspondence":[124],"between":[125],"metabolome,":[129],"involved":[133],"carcinogenesis.":[136],"Furthermore,":[137],"show":[139],"microbiome":[144],"host":[146],"microenvironment,":[147],"metabolites,":[149],"taxa,":[151],"biomarkers":[154,217],"are":[155],"status,":[160],"but":[161],"only":[162],"weakly":[163],"moderately":[165],"neoplastic":[169],"Different":[172],"feature":[173],"classes":[174],"important":[176],"for":[177],"prediction":[178],"different":[180],"phenotypes.":[181],"Lipids":[182],"(e.g.":[183],"sphingolipids":[184],"long-chain":[186],"unsaturated":[187],"fatty":[188],"acids)":[189],"strong":[191],"predictors":[192],"inflammation,":[195],"whereas":[196],"predictions":[197],"microbiota":[200,222],"pH":[203,226],"relied":[204],"mostly":[205],"alterations":[207],"amino":[209],"acid":[210],"metabolism.":[211],"Finally,":[212],"identified":[214],"key":[215],"associated":[218],"composition":[223],"(MIF),":[227],"as":[228,230],"well":[229],"(IL-6,":[233],"IL-10,":[234],"MIP-1\u03b1).":[235]},"counts_by_year":[{"year":2026,"cited_by_count":7},{"year":2025,"cited_by_count":21},{"year":2024,"cited_by_count":22},{"year":2023,"cited_by_count":13},{"year":2022,"cited_by_count":4}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}
