{"id":"https://openalex.org/W4226109838","doi":"https://doi.org/10.1371/journal.pcbi.1009859","title":"STENCIL: A web templating engine for visualizing and sharing life science datasets","display_name":"STENCIL: A web templating engine for visualizing and sharing life science datasets","publication_year":2022,"publication_date":"2022-02-09","ids":{"openalex":"https://openalex.org/W4226109838","doi":"https://doi.org/10.1371/journal.pcbi.1009859","pmid":"https://pubmed.ncbi.nlm.nih.gov/35139076"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1009859","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1009859","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1009859&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1009859&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5047146685","display_name":"Qi Sun","orcid":"https://orcid.org/0000-0001-6140-2204"},"institutions":[{"id":"https://openalex.org/I205783295","display_name":"Cornell University","ror":"https://ror.org/05bnh6r87","country_code":"US","type":"education","lineage":["https://openalex.org/I205783295"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Qi Sun","raw_affiliation_strings":["Cornell Institute of Biotechnology, Cornell University, Ithaca, New York, United States of America"],"raw_orcid":"https://orcid.org/0000-0001-6140-2204","affiliations":[{"raw_affiliation_string":"Cornell Institute of Biotechnology, Cornell University, Ithaca, New York, United States of America","institution_ids":["https://openalex.org/I205783295"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043260247","display_name":"Ali Nematbakhsh","orcid":"https://orcid.org/0000-0001-7411-6039"},"institutions":[{"id":"https://openalex.org/I205783295","display_name":"Cornell University","ror":"https://ror.org/05bnh6r87","country_code":"US","type":"education","lineage":["https://openalex.org/I205783295"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ali Nematbakhsh","raw_affiliation_strings":["Cornell Institute of Biotechnology, Cornell University, Ithaca, New York, United States of America"],"raw_orcid":"https://orcid.org/0000-0001-7411-6039","affiliations":[{"raw_affiliation_string":"Cornell Institute of Biotechnology, Cornell University, Ithaca, New York, United States of America","institution_ids":["https://openalex.org/I205783295"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046356942","display_name":"Prashant Kumar Kuntala","orcid":"https://orcid.org/0000-0002-3372-0691"},"institutions":[{"id":"https://openalex.org/I130769515","display_name":"Pennsylvania State University","ror":"https://ror.org/04p491231","country_code":"US","type":"education","lineage":["https://openalex.org/I130769515"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Prashant K. Kuntala","raw_affiliation_strings":["Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, Pennsylvania, United States of America"],"raw_orcid":"https://orcid.org/0000-0002-3372-0691","affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, Pennsylvania, United States of America","institution_ids":["https://openalex.org/I130769515"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048958401","display_name":"Gretta D. Kellogg","orcid":"https://orcid.org/0000-0002-9171-8696"},"institutions":[{"id":"https://openalex.org/I205783295","display_name":"Cornell University","ror":"https://ror.org/05bnh6r87","country_code":"US","type":"education","lineage":["https://openalex.org/I205783295"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Gretta Kellogg","raw_affiliation_strings":["Cornell Institute of Biotechnology, Cornell University, Ithaca, New York, United States of America"],"raw_orcid":"https://orcid.org/0000-0002-9171-8696","affiliations":[{"raw_affiliation_string":"Cornell Institute of Biotechnology, Cornell University, Ithaca, New York, United States of America","institution_ids":["https://openalex.org/I205783295"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046527896","display_name":"B. Franklin Pugh","orcid":"https://orcid.org/0000-0001-8341-4476"},"institutions":[{"id":"https://openalex.org/I205783295","display_name":"Cornell University","ror":"https://ror.org/05bnh6r87","country_code":"US","type":"education","lineage":["https://openalex.org/I205783295"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"B. Franklin Pugh","raw_affiliation_strings":["Department of Molecular Biology and Genetics, Cornell University, New York, United States of America"],"raw_orcid":"https://orcid.org/0000-0001-8341-4476","affiliations":[{"raw_affiliation_string":"Department of Molecular Biology and Genetics, Cornell University, New York, United States of America","institution_ids":["https://openalex.org/I205783295"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5000405432","display_name":"William Lai","orcid":"https://orcid.org/0000-0003-4351-7037"},"institutions":[{"id":"https://openalex.org/I205783295","display_name":"Cornell University","ror":"https://ror.org/05bnh6r87","country_code":"US","type":"education","lineage":["https://openalex.org/I205783295"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"William K. M. Lai","raw_affiliation_strings":["Department of Computational Biology, Cornell University, New York, United States of America","Department of Molecular Biology and Genetics, Cornell University, New York, United States of America"],"raw_orcid":"https://orcid.org/0000-0003-4351-7037","affiliations":[{"raw_affiliation_string":"Department of Computational Biology, Cornell University, New York, United States of America","institution_ids":["https://openalex.org/I205783295"]},{"raw_affiliation_string":"Department of Molecular Biology and Genetics, Cornell University, New York, United States of America","institution_ids":["https://openalex.org/I205783295"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5000405432"],"corresponding_institution_ids":["https://openalex.org/I205783295"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":1.7081,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.90503721,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":96},"biblio":{"volume":"18","issue":"2","first_page":"e1009859","last_page":"e1009859"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9951000213623047,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9948999881744385,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/stencil","display_name":"Stencil","score":0.9568426609039307},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8182761669158936},{"id":"https://openalex.org/keywords/key","display_name":"Key (lock)","score":0.5673596858978271},{"id":"https://openalex.org/keywords/flexibility","display_name":"Flexibility (engineering)","score":0.543493926525116},{"id":"https://openalex.org/keywords/data-sharing","display_name":"Data sharing","score":0.46653157472610474},{"id":"https://openalex.org/keywords/code","display_name":"Code (set theory)","score":0.4624178111553192},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.4543958008289337},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.4405200481414795},{"id":"https://openalex.org/keywords/web-application","display_name":"Web application","score":0.42555463314056396},{"id":"https://openalex.org/keywords/source-code","display_name":"Source code","score":0.4246048927307129},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4243309199810028},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.32732048630714417},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.32338201999664307},{"id":"https://openalex.org/keywords/computational-science","display_name":"Computational science","score":0.1678345799446106},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.10473006963729858},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.09580031037330627}],"concepts":[{"id":"https://openalex.org/C76752949","wikidata":"https://www.wikidata.org/wiki/Q7607499","display_name":"Stencil","level":2,"score":0.9568426609039307},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8182761669158936},{"id":"https://openalex.org/C26517878","wikidata":"https://www.wikidata.org/wiki/Q228039","display_name":"Key (lock)","level":2,"score":0.5673596858978271},{"id":"https://openalex.org/C2780598303","wikidata":"https://www.wikidata.org/wiki/Q65921492","display_name":"Flexibility (engineering)","level":2,"score":0.543493926525116},{"id":"https://openalex.org/C2779965156","wikidata":"https://www.wikidata.org/wiki/Q5227350","display_name":"Data sharing","level":3,"score":0.46653157472610474},{"id":"https://openalex.org/C2776760102","wikidata":"https://www.wikidata.org/wiki/Q5139990","display_name":"Code (set theory)","level":3,"score":0.4624178111553192},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.4543958008289337},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.4405200481414795},{"id":"https://openalex.org/C118643609","wikidata":"https://www.wikidata.org/wiki/Q189210","display_name":"Web application","level":2,"score":0.42555463314056396},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.4246048927307129},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4243309199810028},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.32732048630714417},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.32338201999664307},{"id":"https://openalex.org/C459310","wikidata":"https://www.wikidata.org/wiki/Q117801","display_name":"Computational science","level":1,"score":0.1678345799446106},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.10473006963729858},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.09580031037330627},{"id":"https://openalex.org/C204787440","wikidata":"https://www.wikidata.org/wiki/Q188504","display_name":"Alternative medicine","level":2,"score":0.0},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.0},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D033181","descriptor_name":"Information Dissemination","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D033181","descriptor_name":"Information Dissemination","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D033181","descriptor_name":"Information Dissemination","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D033181","descriptor_name":"Information Dissemination","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1371/journal.pcbi.1009859","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1009859","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1009859&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:35139076","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35139076","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:8863220","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8863220","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:a4fc962faa9c4ea681facf0acada2c33","is_oa":true,"landing_page_url":"https://doaj.org/article/a4fc962faa9c4ea681facf0acada2c33","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 18, Iss 2, p e1009859 (2022)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1009859","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1009859","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1009859&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Responsible consumption and production","id":"https://metadata.un.org/sdg/12","score":0.5}],"awards":[{"id":"https://openalex.org/G1789587885","display_name":null,"funder_award_id":"R01-ES013768","funder_id":"https://openalex.org/F4320337361","funder_display_name":"National Institute of Environmental Health Sciences"},{"id":"https://openalex.org/G1860562650","display_name":null,"funder_award_id":"R01-GM125722-03S1","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G3475994037","display_name":"Promoter Regulation in Response to Environmental Stress","funder_award_id":"5r01es013768-12","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G8916755756","display_name":null,"funder_award_id":"R01 GM125722","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"},{"id":"https://openalex.org/F4320337361","display_name":"National Institute of Environmental Health Sciences","ror":"https://ror.org/00j4k1h63"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4226109838.pdf","grobid_xml":"https://content.openalex.org/works/W4226109838.grobid-xml"},"referenced_works_count":37,"referenced_works":["https://openalex.org/W2018838463","https://openalex.org/W2023996174","https://openalex.org/W2043701535","https://openalex.org/W2076154138","https://openalex.org/W2078962046","https://openalex.org/W2097464861","https://openalex.org/W2111281047","https://openalex.org/W2125362831","https://openalex.org/W2136482257","https://openalex.org/W2137586531","https://openalex.org/W2144610372","https://openalex.org/W2166602595","https://openalex.org/W2171808845","https://openalex.org/W2259938310","https://openalex.org/W2302501749","https://openalex.org/W2623802615","https://openalex.org/W2769438273","https://openalex.org/W2772047293","https://openalex.org/W2780155440","https://openalex.org/W2922298707","https://openalex.org/W2938875479","https://openalex.org/W2944634251","https://openalex.org/W2952768760","https://openalex.org/W2953109251","https://openalex.org/W2989061519","https://openalex.org/W2996318490","https://openalex.org/W3004505497","https://openalex.org/W3022554931","https://openalex.org/W3030932204","https://openalex.org/W3093604676","https://openalex.org/W3126961181","https://openalex.org/W3135803532","https://openalex.org/W3148879322","https://openalex.org/W3158782117","https://openalex.org/W3195349614","https://openalex.org/W4234525974","https://openalex.org/W4312114021"],"related_works":["https://openalex.org/W3105129168","https://openalex.org/W2804920739","https://openalex.org/W4316371992","https://openalex.org/W2186216222","https://openalex.org/W2392765154","https://openalex.org/W2564509292","https://openalex.org/W2008005532","https://openalex.org/W1971603802","https://openalex.org/W1795008753","https://openalex.org/W2131257462"],"abstract_inverted_index":{"The":[0],"ability":[1],"to":[2,48,72,92,103,123,162],"aggregate":[3],"experimental":[4,110],"data":[5,39,50,81,134,139,149,177],"analysis":[6,155,165,178],"and":[7,12,33,75,115,136,166,185],"results":[8],"into":[9],"a":[10,16,35,67,85,143,152],"concise":[11],"interpretable":[13],"format":[14],"is":[15,34,142],"key":[17,36],"step":[18,28],"in":[19,42,60],"evaluating":[20],"the":[21,54,61,77,124,164,175],"success":[22],"of":[23,57,79,109,168],"an":[24],"experiment.":[25],"This":[26,99],"critical":[27],"determines":[29],"baselines":[30],"for":[31,38,89,179],"reproducibility":[32],"requirement":[37],"dissemination.":[40],"However,":[41],"practice":[43],"it":[44],"can":[45,147],"be":[46],"difficult":[47],"consolidate":[49],"analyses":[51],"that":[52,118,146],"encapsulates":[53],"broad":[55],"range":[56],"datatypes":[58],"available":[59,189],"life":[62],"sciences.":[63],"We":[64],"present":[65],"STENCIL,":[66],"web":[68,87,156],"templating":[69],"engine":[70],"designed":[71],"organize,":[73],"visualize,":[74],"enable":[76],"sharing":[78],"interactive":[80],"visualizations.":[82],"STENCIL":[83,141,158],"leverages":[84],"flexible":[86],"framework":[88],"creating":[90],"templates":[91],"render":[93,104],"highly":[94],"customizable":[95],"visual":[96],"front":[97],"ends.":[98],"flexibility":[100],"enables":[101],"researchers":[102],"small":[105],"or":[106],"large":[107,170],"sets":[108],"outcomes,":[111],"producing":[112],"high-quality":[113],"downloadable":[114],"editable":[116],"figures":[117],"retain":[119],"their":[120],"original":[121],"relationship":[122],"source":[125],"data.":[126],"REST":[127],"API":[128],"based":[129],"back":[130],"ends":[131],"provide":[132],"programmatic":[133],"access":[135],"supports":[137],"easy":[138],"sharing.":[140],"lightweight":[144],"tool":[145],"stream":[148],"from":[150],"Galaxy,":[151],"popular":[153],"bioinformatic":[154],"platform.":[157],"has":[159],"been":[160],"used":[161],"support":[163],"dissemination":[167],"two":[169],"scale":[171],"genomic":[172],"projects":[173],"containing":[174],"complete":[176],"over":[180],"2,400":[181],"distinct":[182],"datasets.":[183],"Code":[184],"implementation":[186],"details":[187],"are":[188],"on":[190],"GitHub:":[191],"https://github.com/CEGRcode/stencil.":[192]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1}],"updated_date":"2026-08-11T07:18:39.950985","created_date":"2025-10-10T00:00:00"}
