{"id":"https://openalex.org/W4226203142","doi":"https://doi.org/10.1371/journal.pcbi.1009684","title":"Systematic evaluation of NIPT aneuploidy detection software tools with clinically validated NIPT samples","display_name":"Systematic evaluation of NIPT aneuploidy detection software tools with clinically validated NIPT samples","publication_year":2021,"publication_date":"2021-12-20","ids":{"openalex":"https://openalex.org/W4226203142","doi":"https://doi.org/10.1371/journal.pcbi.1009684","pmid":"https://pubmed.ncbi.nlm.nih.gov/34928946"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1009684","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1009684","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1009684&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1009684&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5037571237","display_name":"Priit Paluoja","orcid":"https://orcid.org/0000-0002-2016-661X"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]},{"id":"https://openalex.org/I4210165715","display_name":"Competence Centre on Health Technologies (Estonia)","ror":"https://ror.org/05kagrs11","country_code":"EE","type":"company","lineage":["https://openalex.org/I4210165715"]},{"id":"https://openalex.org/I56085075","display_name":"University of Tartu","ror":"https://ror.org/03z77qz90","country_code":"EE","type":"education","lineage":["https://openalex.org/I56085075"]}],"countries":["EE","FI"],"is_corresponding":false,"raw_author_name":"Priit Paluoja","raw_affiliation_strings":["Competence Centre for Health Technologies, Tartu, Estonia","Doctoral Programme in Population Health, Faculty of Medicine, University of Helsinki, Helsinki, Finland","Institute of Clinical Medicine, University of Tartu, Tartu, Estonia"],"raw_orcid":"https://orcid.org/0000-0002-2016-661X","affiliations":[{"raw_affiliation_string":"Competence Centre for Health Technologies, Tartu, Estonia","institution_ids":["https://openalex.org/I4210165715"]},{"raw_affiliation_string":"Doctoral Programme in Population Health, Faculty of Medicine, University of Helsinki, Helsinki, Finland","institution_ids":["https://openalex.org/I133731052"]},{"raw_affiliation_string":"Institute of Clinical Medicine, University of Tartu, Tartu, Estonia","institution_ids":["https://openalex.org/I56085075"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051746933","display_name":"Hindrek Teder","orcid":"https://orcid.org/0000-0001-6608-7979"},"institutions":[{"id":"https://openalex.org/I4210165715","display_name":"Competence Centre on Health Technologies (Estonia)","ror":"https://ror.org/05kagrs11","country_code":"EE","type":"company","lineage":["https://openalex.org/I4210165715"]},{"id":"https://openalex.org/I56085075","display_name":"University of Tartu","ror":"https://ror.org/03z77qz90","country_code":"EE","type":"education","lineage":["https://openalex.org/I56085075"]}],"countries":["EE"],"is_corresponding":false,"raw_author_name":"Hindrek Teder","raw_affiliation_strings":["Competence Centre for Health Technologies, Tartu, Estonia","Institute of Biomedicine and Translational Medicine, Department of Biomedicine, University of Tartu, Tartu, Estonia"],"raw_orcid":"https://orcid.org/0000-0001-6608-7979","affiliations":[{"raw_affiliation_string":"Competence Centre for Health Technologies, Tartu, Estonia","institution_ids":["https://openalex.org/I4210165715"]},{"raw_affiliation_string":"Institute of Biomedicine and Translational Medicine, Department of Biomedicine, University of Tartu, Tartu, Estonia","institution_ids":["https://openalex.org/I56085075"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046353002","display_name":"Amin Ardeshirdavani","orcid":"https://orcid.org/0000-0002-7226-7324"},"institutions":[{"id":"https://openalex.org/I99464096","display_name":"KU Leuven","ror":"https://ror.org/05f950310","country_code":"BE","type":"education","lineage":["https://openalex.org/I99464096"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Amin Ardeshirdavani","raw_affiliation_strings":["Department of Human Genetics, KU Leuven, Leuven, Belgium"],"raw_orcid":"https://orcid.org/0000-0002-7226-7324","affiliations":[{"raw_affiliation_string":"Department of Human Genetics, KU Leuven, Leuven, Belgium","institution_ids":["https://openalex.org/I99464096"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037381047","display_name":"Baran Bayindir","orcid":null},"institutions":[{"id":"https://openalex.org/I99464096","display_name":"KU Leuven","ror":"https://ror.org/05f950310","country_code":"BE","type":"education","lineage":["https://openalex.org/I99464096"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Baran Bayindir","raw_affiliation_strings":["Department of Human Genetics, KU Leuven, Leuven, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Human Genetics, KU Leuven, Leuven, Belgium","institution_ids":["https://openalex.org/I99464096"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074427420","display_name":"Joris Vermeesch","orcid":"https://orcid.org/0000-0002-3071-1191"},"institutions":[{"id":"https://openalex.org/I99464096","display_name":"KU Leuven","ror":"https://ror.org/05f950310","country_code":"BE","type":"education","lineage":["https://openalex.org/I99464096"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Joris Vermeesch","raw_affiliation_strings":["Department of Human Genetics, KU Leuven, Leuven, Belgium"],"raw_orcid":"https://orcid.org/0000-0002-3071-1191","affiliations":[{"raw_affiliation_string":"Department of Human Genetics, KU Leuven, Leuven, Belgium","institution_ids":["https://openalex.org/I99464096"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061962903","display_name":"Andres Salumets","orcid":"https://orcid.org/0000-0002-1251-8160"},"institutions":[{"id":"https://openalex.org/I28166907","display_name":"Karolinska Institutet","ror":"https://ror.org/056d84691","country_code":"SE","type":"education","lineage":["https://openalex.org/I28166907"]},{"id":"https://openalex.org/I4210165715","display_name":"Competence Centre on Health Technologies (Estonia)","ror":"https://ror.org/05kagrs11","country_code":"EE","type":"company","lineage":["https://openalex.org/I4210165715"]},{"id":"https://openalex.org/I56085075","display_name":"University of Tartu","ror":"https://ror.org/03z77qz90","country_code":"EE","type":"education","lineage":["https://openalex.org/I56085075"]}],"countries":["EE","SE"],"is_corresponding":false,"raw_author_name":"Andres Salumets","raw_affiliation_strings":["Competence Centre for Health Technologies, Tartu, Estonia","Department of Obstetrics and Gynaecology, Institute of Clinical Medicine, University of Tartu, Tartu, Estonia","Division of Obstetrics and Gynecology, Department of Clinical Science, Intervention and Technology (CLINTEC), Karolinska Institutet, Stockholm, Sweden"],"raw_orcid":"https://orcid.org/0000-0002-1251-8160","affiliations":[{"raw_affiliation_string":"Competence Centre for Health Technologies, Tartu, Estonia","institution_ids":["https://openalex.org/I4210165715"]},{"raw_affiliation_string":"Department of Obstetrics and Gynaecology, Institute of Clinical Medicine, University of Tartu, Tartu, Estonia","institution_ids":["https://openalex.org/I56085075"]},{"raw_affiliation_string":"Division of Obstetrics and Gynecology, Department of Clinical Science, Intervention and Technology (CLINTEC), Karolinska Institutet, Stockholm, Sweden","institution_ids":["https://openalex.org/I28166907"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012737483","display_name":"Kaarel Krjut\u0161kov","orcid":"https://orcid.org/0000-0003-1297-1464"},"institutions":[{"id":"https://openalex.org/I4210165715","display_name":"Competence Centre on Health Technologies (Estonia)","ror":"https://ror.org/05kagrs11","country_code":"EE","type":"company","lineage":["https://openalex.org/I4210165715"]},{"id":"https://openalex.org/I56085075","display_name":"University of Tartu","ror":"https://ror.org/03z77qz90","country_code":"EE","type":"education","lineage":["https://openalex.org/I56085075"]}],"countries":["EE"],"is_corresponding":false,"raw_author_name":"Kaarel Krjut\u0161kov","raw_affiliation_strings":["Competence Centre for Health Technologies, Tartu, Estonia","Department of Obstetrics and Gynaecology, Institute of Clinical Medicine, University of Tartu, Tartu, Estonia"],"raw_orcid":"https://orcid.org/0000-0003-1297-1464","affiliations":[{"raw_affiliation_string":"Competence Centre for Health Technologies, Tartu, Estonia","institution_ids":["https://openalex.org/I4210165715"]},{"raw_affiliation_string":"Department of Obstetrics and Gynaecology, Institute of Clinical Medicine, University of Tartu, Tartu, Estonia","institution_ids":["https://openalex.org/I56085075"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5066237538","display_name":"Priit Palta","orcid":"https://orcid.org/0000-0001-9320-7008"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]},{"id":"https://openalex.org/I4210133586","display_name":"Institute for Molecular Medicine Finland","ror":"https://ror.org/030sbze61","country_code":"FI","type":"facility","lineage":["https://openalex.org/I133731052","https://openalex.org/I4210133586"]},{"id":"https://openalex.org/I4210165715","display_name":"Competence Centre on Health Technologies (Estonia)","ror":"https://ror.org/05kagrs11","country_code":"EE","type":"company","lineage":["https://openalex.org/I4210165715"]},{"id":"https://openalex.org/I56085075","display_name":"University of Tartu","ror":"https://ror.org/03z77qz90","country_code":"EE","type":"education","lineage":["https://openalex.org/I56085075"]}],"countries":["EE","FI"],"is_corresponding":true,"raw_author_name":"Priit Palta","raw_affiliation_strings":["Competence Centre for Health Technologies, Tartu, Estonia","Estonian Genome Centre, Institute of Genomics, University of Tartu, Tartu, Estonia","Institute for Molecular Medicine Finland (FIMM), HiLIFE, University of Helsinki, Helsinki, Finland"],"raw_orcid":"https://orcid.org/0000-0001-9320-7008","affiliations":[{"raw_affiliation_string":"Competence Centre for Health Technologies, Tartu, Estonia","institution_ids":["https://openalex.org/I4210165715"]},{"raw_affiliation_string":"Estonian Genome Centre, Institute of Genomics, University of Tartu, Tartu, Estonia","institution_ids":["https://openalex.org/I56085075"]},{"raw_affiliation_string":"Institute for Molecular Medicine Finland (FIMM), HiLIFE, University of Helsinki, Helsinki, Finland","institution_ids":["https://openalex.org/I4210133586","https://openalex.org/I133731052"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5066237538"],"corresponding_institution_ids":["https://openalex.org/I133731052","https://openalex.org/I4210133586","https://openalex.org/I4210165715","https://openalex.org/I56085075"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":3.8093,"has_fulltext":true,"cited_by_count":17,"citation_normalized_percentile":{"value":0.93317544,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":98},"biblio":{"volume":"17","issue":"12","first_page":"e1009684","last_page":"e1009684"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10978","display_name":"Prenatal Screening and Diagnostics","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/2735","display_name":"Pediatrics, Perinatology and Child Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10978","display_name":"Prenatal Screening and Diagnostics","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/2735","display_name":"Pediatrics, Perinatology and Child Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12552","display_name":"Fetal and Pediatric Neurological Disorders","score":0.9912999868392944,"subfield":{"id":"https://openalex.org/subfields/2735","display_name":"Pediatrics, Perinatology and Child Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T13383","display_name":"Tumors and Oncological Cases","score":0.9549000263214111,"subfield":{"id":"https://openalex.org/subfields/2734","display_name":"Pathology and Forensic Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/trisomy","display_name":"Trisomy","score":0.8516474962234497},{"id":"https://openalex.org/keywords/aneuploidy","display_name":"Aneuploidy","score":0.5631186962127686},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.41341632604599},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3511352837085724},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.32003527879714966},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3159346580505371},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.1765027940273285},{"id":"https://openalex.org/keywords/chromosome","display_name":"Chromosome","score":0.1531079113483429}],"concepts":[{"id":"https://openalex.org/C2776229224","wikidata":"https://www.wikidata.org/wiki/Q844903","display_name":"Trisomy","level":2,"score":0.8516474962234497},{"id":"https://openalex.org/C2779672484","wikidata":"https://www.wikidata.org/wiki/Q529622","display_name":"Aneuploidy","level":4,"score":0.5631186962127686},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.41341632604599},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3511352837085724},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.32003527879714966},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3159346580505371},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.1765027940273285},{"id":"https://openalex.org/C30481170","wikidata":"https://www.wikidata.org/wiki/Q37748","display_name":"Chromosome","level":3,"score":0.1531079113483429},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000073336","descriptor_name":"Whole Genome Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000073336","descriptor_name":"Whole Genome Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000073336","descriptor_name":"Whole Genome Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000081182","descriptor_name":"Noninvasive Prenatal Testing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D000081182","descriptor_name":"Noninvasive Prenatal Testing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D000081182","descriptor_name":"Noninvasive Prenatal Testing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D000782","descriptor_name":"Aneuploidy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000782","descriptor_name":"Aneuploidy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000782","descriptor_name":"Aneuploidy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003936","descriptor_name":"Diagnosis, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D003936","descriptor_name":"Diagnosis, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D003936","descriptor_name":"Diagnosis, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011247","descriptor_name":"Pregnancy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011247","descriptor_name":"Pregnancy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011247","descriptor_name":"Pregnancy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":7,"locations":[{"id":"doi:10.1371/journal.pcbi.1009684","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1009684","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1009684&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:34928946","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34928946","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:lirias2repo.kuleuven.be:20.500.12942/686711","is_oa":true,"landing_page_url":"https://lirias.kuleuven.be/handle/20.500.12942/686711","pdf_url":null,"source":{"id":"https://openalex.org/S7407055369","display_name":"Lirias","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"Plos Computational Biology, vol. 17 (12), Art.No. ARTN e1009684","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:doaj.org/article:9502a8a197d9486dbd7940f103034e13","is_oa":true,"landing_page_url":"https://doaj.org/article/9502a8a197d9486dbd7940f103034e13","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 17, Iss 12, p e1009684 (2021)","raw_type":"article"},{"id":"pmh:oai:helda.helsinki.fi:10138/338610","is_oa":true,"landing_page_url":"http://hdl.handle.net/10138/338610","pdf_url":null,"source":{"id":"https://openalex.org/S4210213322","display_name":"Ty\u00f6v\u00e4entutkimus Vuosikirja","issn_l":"0784-1272","issn":["0784-1272","1459-7780"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"pmh:oai:iris.unica.it:11584/356298","is_oa":true,"landing_page_url":"https://hdl.handle.net/11584/356298","pdf_url":null,"source":{"id":"https://openalex.org/S4377196293","display_name":"UNICA IRIS Institutional Research Information System (University of Cagliari)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I172446870","host_organization_name":"University of Cagliari","host_organization_lineage":["https://openalex.org/I172446870"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:pubmedcentral.nih.gov:8722721","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8722721","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1009684","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1009684","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1009684&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3406532743","display_name":null,"funder_award_id":"EU53935","funder_id":"https://openalex.org/F4320323985","funder_display_name":"Ettev\u00f5tluse Arendamise Sihtasutus"},{"id":"https://openalex.org/G3432150744","display_name":null,"funder_award_id":"PRG1076","funder_id":"https://openalex.org/F4320321090","funder_display_name":"Eesti Teadusagentuur"},{"id":"https://openalex.org/G6258843610","display_name":null,"funder_award_id":"EU952516","funder_id":"https://openalex.org/F4320332999","funder_display_name":"Horizon 2020 Framework Programme"},{"id":"https://openalex.org/G7889934125","display_name":null,"funder_award_id":"EU48695","funder_id":"https://openalex.org/F4320323985","funder_display_name":"Ettev\u00f5tluse Arendamise Sihtasutus"}],"funders":[{"id":"https://openalex.org/F4320321090","display_name":"Eesti Teadusagentuur","ror":"https://ror.org/00jjeja18"},{"id":"https://openalex.org/F4320323985","display_name":"Ettev\u00f5tluse Arendamise Sihtasutus","ror":"https://ror.org/02sfn4p13"},{"id":"https://openalex.org/F4320332999","display_name":"Horizon 2020 Framework Programme","ror":"https://ror.org/00k4n6c32"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4226203142.pdf","grobid_xml":"https://content.openalex.org/works/W4226203142.grobid-xml"},"referenced_works_count":21,"referenced_works":["https://openalex.org/W1720911209","https://openalex.org/W1941739197","https://openalex.org/W2045847132","https://openalex.org/W2116869873","https://openalex.org/W2133906563","https://openalex.org/W2143787281","https://openalex.org/W2155553535","https://openalex.org/W2155805292","https://openalex.org/W2470435165","https://openalex.org/W2563699674","https://openalex.org/W2795524567","https://openalex.org/W2905563084","https://openalex.org/W2920143708","https://openalex.org/W2944808929","https://openalex.org/W2959261453","https://openalex.org/W2989065531","https://openalex.org/W2994723767","https://openalex.org/W3081171605","https://openalex.org/W3131055609","https://openalex.org/W3135480886","https://openalex.org/W6964301558"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2082860237","https://openalex.org/W2119695867","https://openalex.org/W2130076355","https://openalex.org/W1990804418","https://openalex.org/W1993764875","https://openalex.org/W2046158694","https://openalex.org/W2788277189","https://openalex.org/W2013243191","https://openalex.org/W1971568933"],"abstract_inverted_index":{"Non-invasive":[0],"prenatal":[1],"testing":[2],"(NIPT)":[3],"is":[4,161],"a":[5],"powerful":[6],"screening":[7],"method":[8],"for":[9,51,151],"fetal":[10,76,85],"aneuploidy":[11,61],"detection,":[12,176],"relying":[13],"on":[14],"laboratory":[15],"and":[16,68,75,94,136,140],"computational":[17,25,59,144],"analysis":[18,27,62],"of":[19,37,84,103,118,142,173],"cell-free":[20],"DNA.":[21],"Although":[22],"several":[23],"published":[24],"NIPT":[26,60,145,154,168],"tools":[28,40,63,106],"are":[29],"available,":[30],"no":[31],"prior":[32],"comprehensive,":[33],"head-to-head":[34],"accuracy":[35],"comparison":[36],"the":[38,47,104,127,138],"various":[39,71],"has":[41],"been":[42],"published.":[43],"Here,":[44],"we":[45],"compared":[46,105],"outcome":[48],"accuracies":[49],"obtained":[50],"clinically":[52],"validated":[53],"samples":[54,155],"with":[55,166],"five":[56],"commonly":[57],"used":[58],"(WisecondorX,":[64],"NIPTeR,":[65],"NIPTmer,":[66],"RAPIDR,":[67],"GIPseq)":[69],"across":[70],"sequencing":[72,112,128],"depths":[73],"(coverage)":[74],"DNA":[77],"fractions.":[78],"The":[79],"sample":[80],"set":[81],"included":[82],"cases":[83,121],"trisomy":[86,90,95,120,149,175],"21":[87],"(Down":[88],"syndrome),":[89,93],"18":[91],"(Edwards":[92],"13":[96],"(Patau":[97],"syndrome).":[98],"We":[99,131],"determined":[100],"that":[101,115],"all":[102],"were":[107,124],"considerably":[108],"affected":[109],"by":[110],"lower":[111,152],"depths,":[113],"such":[114],"increasing":[116],"proportions":[117],"undetected":[119],"(false":[122],"negatives)":[123],"observed":[125],"as":[126],"depth":[129],"decreased.":[130],"summarised":[132],"our":[133],"benchmarking":[134],"results":[135],"highlighted":[137],"advantages":[139],"disadvantages":[141],"each":[143],"software.":[146],"To":[147],"conclude,":[148],"detection":[150],"coverage":[153],"(e.g.":[156],"2.5M":[157],"reads":[158],"per":[159],"sample)":[160],"technically":[162],"possible":[163],"but":[164],"can,":[165],"some":[167],"tools,":[169],"produce":[170],"troubling":[171],"rates":[172],"inaccurate":[174],"especially":[177],"in":[178],"low-FF":[179],"samples.":[180]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":6}],"updated_date":"2026-06-17T08:01:34.144755","created_date":"2025-10-10T00:00:00"}
