{"id":"https://openalex.org/W4200246270","doi":"https://doi.org/10.1371/journal.pcbi.1009592","title":"Ten simple rules for developing bioinformatics capacity at an academic institution","display_name":"Ten simple rules for developing bioinformatics capacity at an academic institution","publication_year":2021,"publication_date":"2021-12-09","ids":{"openalex":"https://openalex.org/W4200246270","doi":"https://doi.org/10.1371/journal.pcbi.1009592","pmid":"https://pubmed.ncbi.nlm.nih.gov/34882684"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1009592","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1009592","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1009592&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"editorial","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1009592&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5079517255","display_name":"Shaun Aron","orcid":"https://orcid.org/0000-0001-6200-0485"},"institutions":[{"id":"https://openalex.org/I192619145","display_name":"University of the Witwatersrand","ror":"https://ror.org/03rp50x72","country_code":"ZA","type":"education","lineage":["https://openalex.org/I192619145"]}],"countries":["ZA"],"is_corresponding":true,"raw_author_name":"Shaun Aron","raw_affiliation_strings":["Sydney Brenner Institute for Molecular Bioscience, University of the Witwatersrand, Johannesburg, South Africa"],"raw_orcid":"https://orcid.org/0000-0001-6200-0485","affiliations":[{"raw_affiliation_string":"Sydney Brenner Institute for Molecular Bioscience, University of the Witwatersrand, Johannesburg, South Africa","institution_ids":["https://openalex.org/I192619145"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074106693","display_name":"C. Victor Jongeneel","orcid":"https://orcid.org/0000-0002-3922-1906"},"institutions":[{"id":"https://openalex.org/I4210092217","display_name":"Ineos (Switzerland)","ror":"https://ror.org/00h6s5242","country_code":"CH","type":"company","lineage":["https://openalex.org/I4210092217","https://openalex.org/I4210166913"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"C. Victor Jongeneel","raw_affiliation_strings":["Independent consultant, Rolle, Switzerland"],"raw_orcid":"https://orcid.org/0000-0002-3922-1906","affiliations":[{"raw_affiliation_string":"Independent consultant, Rolle, Switzerland","institution_ids":["https://openalex.org/I4210092217"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036325002","display_name":"Paballo Abel Chauke","orcid":"https://orcid.org/0000-0001-9257-616X"},"institutions":[{"id":"https://openalex.org/I157614274","display_name":"University of Cape Town","ror":"https://ror.org/03p74gp79","country_code":"ZA","type":"education","lineage":["https://openalex.org/I157614274"]},{"id":"https://openalex.org/I4210138455","display_name":"Wellcome Centre for Infectious Diseases Research in Africa","ror":"https://ror.org/040b19m18","country_code":"ZA","type":"facility","lineage":["https://openalex.org/I157614274","https://openalex.org/I4210138455","https://openalex.org/I87048295"]}],"countries":["ZA"],"is_corresponding":false,"raw_author_name":"Paballo Abel Chauke","raw_affiliation_strings":["Computational Biology Division, Department of Integrative Biomedical Sciences, Institute of Infectious Disease and Molecular Medicine, CIDRI Africa Wellcome Trust Centre, Faculty of Health Sciences, University of Cape Town, Cape Town, South Africa"],"raw_orcid":"https://orcid.org/0000-0001-9257-616X","affiliations":[{"raw_affiliation_string":"Computational Biology Division, Department of Integrative Biomedical Sciences, Institute of Infectious Disease and Molecular Medicine, CIDRI Africa Wellcome Trust Centre, Faculty of Health Sciences, University of Cape Town, Cape Town, South Africa","institution_ids":["https://openalex.org/I4210138455","https://openalex.org/I157614274"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058239412","display_name":"Melek Chaouch","orcid":"https://orcid.org/0000-0001-5868-4204"},"institutions":[{"id":"https://openalex.org/I4210142087","display_name":"Institut Pasteur de Tunis","ror":"https://ror.org/04pwyer06","country_code":"TN","type":"facility","lineage":["https://openalex.org/I4210142087"]},{"id":"https://openalex.org/I63596082","display_name":"Tunis El Manar University","ror":"https://ror.org/029cgt552","country_code":"TN","type":"education","lineage":["https://openalex.org/I63596082"]}],"countries":["TN"],"is_corresponding":false,"raw_author_name":"Melek Chaouch","raw_affiliation_strings":["Laboratory of bioinformatics, biomathematics and biostatistics, Institut Pasteur de Tunis, Universit\u00e9 Tunis El Manar, Belv\u00e9d\u00e8re, Tunisia"],"raw_orcid":"https://orcid.org/0000-0001-5868-4204","affiliations":[{"raw_affiliation_string":"Laboratory of bioinformatics, biomathematics and biostatistics, Institut Pasteur de Tunis, Universit\u00e9 Tunis El Manar, Belv\u00e9d\u00e8re, Tunisia","institution_ids":["https://openalex.org/I4210142087","https://openalex.org/I63596082"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047153295","display_name":"Judit Kumuthini","orcid":"https://orcid.org/0000-0002-8008-1917"},"institutions":[{"id":"https://openalex.org/I869660684","display_name":"University of the Western Cape","ror":"https://ror.org/00h2vm590","country_code":"ZA","type":"education","lineage":["https://openalex.org/I869660684"]}],"countries":["ZA"],"is_corresponding":false,"raw_author_name":"Judit Kumuthini","raw_affiliation_strings":["South African National Bioinformatics Institute, University of the Western Cape, Cape Town, South Africa"],"raw_orcid":"https://orcid.org/0000-0002-8008-1917","affiliations":[{"raw_affiliation_string":"South African National Bioinformatics Institute, University of the Western Cape, Cape Town, South Africa","institution_ids":["https://openalex.org/I869660684"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016090609","display_name":"Lyndon Zass","orcid":"https://orcid.org/0000-0001-8862-1706"},"institutions":[{"id":"https://openalex.org/I157614274","display_name":"University of Cape Town","ror":"https://ror.org/03p74gp79","country_code":"ZA","type":"education","lineage":["https://openalex.org/I157614274"]},{"id":"https://openalex.org/I4210138455","display_name":"Wellcome Centre for Infectious Diseases Research in Africa","ror":"https://ror.org/040b19m18","country_code":"ZA","type":"facility","lineage":["https://openalex.org/I157614274","https://openalex.org/I4210138455","https://openalex.org/I87048295"]}],"countries":["ZA"],"is_corresponding":false,"raw_author_name":"Lyndon Zass","raw_affiliation_strings":["Computational Biology Division, Department of Integrative Biomedical Sciences, Institute of Infectious Disease and Molecular Medicine, CIDRI Africa Wellcome Trust Centre, Faculty of Health Sciences, University of Cape Town, Cape Town, South Africa"],"raw_orcid":"https://orcid.org/0000-0001-8862-1706","affiliations":[{"raw_affiliation_string":"Computational Biology Division, Department of Integrative Biomedical Sciences, Institute of Infectious Disease and Molecular Medicine, CIDRI Africa Wellcome Trust Centre, Faculty of Health Sciences, University of Cape Town, Cape Town, South Africa","institution_ids":["https://openalex.org/I4210138455","https://openalex.org/I157614274"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025962833","display_name":"Fouzia Radouani","orcid":"https://orcid.org/0000-0002-6221-2661"},"institutions":[{"id":"https://openalex.org/I4210151823","display_name":"Institut Pasteur du Maroc","ror":"https://ror.org/04yb4j419","country_code":"MA","type":"facility","lineage":["https://openalex.org/I4210151823"]}],"countries":["MA"],"is_corresponding":false,"raw_author_name":"Fouzia Radouani","raw_affiliation_strings":["Chlamydiae & Mycoplasmas Laboratory Research Department, Institut Pasteur du Maroc, Casablanca, Morocco"],"raw_orcid":"https://orcid.org/0000-0002-6221-2661","affiliations":[{"raw_affiliation_string":"Chlamydiae & Mycoplasmas Laboratory Research Department, Institut Pasteur du Maroc, Casablanca, Morocco","institution_ids":["https://openalex.org/I4210151823"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039362444","display_name":"Samar K. Kassim","orcid":"https://orcid.org/0000-0002-4359-6620"},"institutions":[{"id":"https://openalex.org/I107720978","display_name":"Ain Shams University","ror":"https://ror.org/00cb9w016","country_code":"EG","type":"education","lineage":["https://openalex.org/I107720978"]}],"countries":["EG"],"is_corresponding":false,"raw_author_name":"Samar Kamal Kassim","raw_affiliation_strings":["Medical Biochemistry & Molecular Biology Department, and MASRI Research Institute, Faculty of Medicine, Ain Shams University, Cairo, Egypt"],"raw_orcid":"https://orcid.org/0000-0002-4359-6620","affiliations":[{"raw_affiliation_string":"Medical Biochemistry & Molecular Biology Department, and MASRI Research Institute, Faculty of Medicine, Ain Shams University, Cairo, Egypt","institution_ids":["https://openalex.org/I107720978"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034537948","display_name":"Faisal M. Fadlelmola","orcid":"https://orcid.org/0000-0001-8351-264X"},"institutions":[{"id":"https://openalex.org/I150406212","display_name":"University of Khartoum","ror":"https://ror.org/02jbayz55","country_code":"SD","type":"education","lineage":["https://openalex.org/I150406212"]}],"countries":["SD"],"is_corresponding":false,"raw_author_name":"Faisal M. Fadlelmola","raw_affiliation_strings":["Centre for Bioinformatics and Systems Biology, Faculty of Science, University of Khartoum, Khartoum, Sudan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre for Bioinformatics and Systems Biology, Faculty of Science, University of Khartoum, Khartoum, Sudan","institution_ids":["https://openalex.org/I150406212"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5080377820","display_name":"Nicola Mulder","orcid":"https://orcid.org/0000-0003-4905-0941"},"institutions":[{"id":"https://openalex.org/I157614274","display_name":"University of Cape Town","ror":"https://ror.org/03p74gp79","country_code":"ZA","type":"education","lineage":["https://openalex.org/I157614274"]},{"id":"https://openalex.org/I4210138455","display_name":"Wellcome Centre for Infectious Diseases Research in Africa","ror":"https://ror.org/040b19m18","country_code":"ZA","type":"facility","lineage":["https://openalex.org/I157614274","https://openalex.org/I4210138455","https://openalex.org/I87048295"]}],"countries":["ZA"],"is_corresponding":false,"raw_author_name":"Nicola Mulder","raw_affiliation_strings":["Computational Biology Division, Department of Integrative Biomedical Sciences, Institute of Infectious Disease and Molecular Medicine, CIDRI Africa Wellcome Trust Centre, Faculty of Health Sciences, University of Cape Town, Cape Town, South Africa"],"raw_orcid":"https://orcid.org/0000-0003-4905-0941","affiliations":[{"raw_affiliation_string":"Computational Biology Division, Department of Integrative Biomedical Sciences, Institute of Infectious Disease and Molecular Medicine, CIDRI Africa Wellcome Trust Centre, Faculty of Health Sciences, University of Cape Town, Cape Town, South Africa","institution_ids":["https://openalex.org/I4210138455","https://openalex.org/I157614274"]}]}],"institutions":[],"countries_distinct_count":6,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5079517255"],"corresponding_institution_ids":["https://openalex.org/I192619145"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":0.4753,"has_fulltext":true,"cited_by_count":12,"citation_normalized_percentile":{"value":0.62043915,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"17","issue":"12","first_page":"e1009592","last_page":"e1009592"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13280","display_name":"Biomedical and Engineering Education","score":0.9652000069618225,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11937","display_name":"Research Data Management Practices","score":0.9207000136375427,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/simple","display_name":"Simple (philosophy)","score":0.7094042301177979},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.5282254219055176},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5148047804832458},{"id":"https://openalex.org/keywords/institution","display_name":"Institution","score":0.4476376175880432},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.43245401978492737},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3522093892097473},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.24793300032615662}],"concepts":[{"id":"https://openalex.org/C2780586882","wikidata":"https://www.wikidata.org/wiki/Q7520643","display_name":"Simple (philosophy)","level":2,"score":0.7094042301177979},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.5282254219055176},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5148047804832458},{"id":"https://openalex.org/C2780510313","wikidata":"https://www.wikidata.org/wiki/Q178706","display_name":"Institution","level":2,"score":0.4476376175880432},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.43245401978492737},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3522093892097473},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.24793300032615662},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000349","descriptor_name":"Africa","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000349","descriptor_name":"Africa","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000349","descriptor_name":"Africa","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004059","descriptor_name":"Diffusion of Innovation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004059","descriptor_name":"Diffusion of Innovation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004059","descriptor_name":"Diffusion of Innovation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007391","descriptor_name":"International Cooperation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007391","descriptor_name":"International Cooperation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007391","descriptor_name":"International Cooperation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009316","descriptor_name":"National Institutes of Health (U.S.)","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009316","descriptor_name":"National Institutes of Health (U.S.)","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009316","descriptor_name":"National Institutes of Health (U.S.)","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012574","descriptor_name":"Schools","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012574","descriptor_name":"Schools","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012574","descriptor_name":"Schools","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014481","descriptor_name":"United States","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014481","descriptor_name":"United States","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014481","descriptor_name":"United States","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014495","descriptor_name":"Universities","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014495","descriptor_name":"Universities","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014495","descriptor_name":"Universities","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000193","qualifier_name":"education","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000193","qualifier_name":"education","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000193","qualifier_name":"education","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000458","qualifier_name":"organization & administration","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000458","qualifier_name":"organization & administration","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000458","qualifier_name":"organization & administration","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":7,"locations":[{"id":"doi:10.1371/journal.pcbi.1009592","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1009592","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1009592&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:34882684","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34882684","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:HAL:pasteur-03630984v1","is_oa":true,"landing_page_url":"https://riip.hal.science/pasteur-03630984","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, 2021, 17 (12), pp.e1009592. &#x27E8;10.1371/journal.pcbi.1009592&#x27E9;","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:RePEc:plo:pcbi00:1009592","is_oa":false,"landing_page_url":"https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1009592","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},{"id":"pmh:oai:doaj.org/article:2eaaf34ff0034cda92f276033fef77a0","is_oa":true,"landing_page_url":"https://doaj.org/article/2eaaf34ff0034cda92f276033fef77a0","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 17, Iss 12 (2021)","raw_type":"article"},{"id":"pmh:oai:doaj.org/article:7de5f3b4bb1b48ab9bf0700c4086f511","is_oa":true,"landing_page_url":"https://doaj.org/article/7de5f3b4bb1b48ab9bf0700c4086f511","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 17, Iss 12, p e1009592 (2021)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:8659687","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8659687","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1009592","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1009592","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1009592&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/9","score":0.5,"display_name":"Industry, innovation and infrastructure"}],"awards":[{"id":"https://openalex.org/G2686526988","display_name":"University of Cape Town - to create a semi-standardized pathogen NGS training curriculum for the African continent","funder_award_id":"INV-018977","funder_id":"https://openalex.org/F4320306137","funder_display_name":"Bill and Melinda Gates Foundation"},{"id":"https://openalex.org/G4219278813","display_name":null,"funder_award_id":"U24HG006941","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G8936052485","display_name":null,"funder_award_id":"U24HG006941","funder_id":"https://openalex.org/F4320338403","funder_display_name":"Common Fund"}],"funders":[{"id":"https://openalex.org/F4320306137","display_name":"Bill and Melinda Gates Foundation","ror":"https://ror.org/0456r8d26"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320338403","display_name":"Common Fund","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4200246270.pdf","grobid_xml":"https://content.openalex.org/works/W4200246270.grobid-xml"},"referenced_works_count":22,"referenced_works":["https://openalex.org/W2025062459","https://openalex.org/W2068150568","https://openalex.org/W2110548842","https://openalex.org/W2165889944","https://openalex.org/W2188414616","https://openalex.org/W2229212657","https://openalex.org/W2595620420","https://openalex.org/W2762107751","https://openalex.org/W2783454336","https://openalex.org/W2788436468","https://openalex.org/W2789684428","https://openalex.org/W2919241818","https://openalex.org/W2934073398","https://openalex.org/W2936416839","https://openalex.org/W3004938578","https://openalex.org/W3013971422","https://openalex.org/W3016488445","https://openalex.org/W3023211948","https://openalex.org/W3130912132","https://openalex.org/W3152280242","https://openalex.org/W3196143980","https://openalex.org/W3201938018"],"related_works":["https://openalex.org/W1585007175","https://openalex.org/W2382521049","https://openalex.org/W2144385241","https://openalex.org/W4253593777","https://openalex.org/W2951497643","https://openalex.org/W2165950148","https://openalex.org/W4300101996","https://openalex.org/W3101625811","https://openalex.org/W2338854850","https://openalex.org/W2356956089"],"abstract_inverted_index":{"Bioinformatics":[0],"is":[1,9],"an":[2],"applied":[3],"interdisciplinary":[4,91],"field":[5],"whose":[6],"primary":[7],"purpose":[8],"to":[10,16,54,67,95,102],"develop":[11],"and":[12,19,24,40,52,75,81,114],"deploy":[13],"computational":[14],"techniques":[15,46],"store,":[17],"organize,":[18],"aid":[20],"in":[21,35,108,120,124],"the":[22,36,56,103,125,129],"analysis":[23,37],"interpretation":[25],"of":[26,38,58,70,93,106],"large-scale":[27],"data":[28,49],"obtained":[29],"from":[30],"biological":[31,59],"systems.":[32],"While":[33],"rooted":[34],"nucleotide":[39],"protein":[41],"sequences,":[42],"it":[43],"now":[44],"encompasses":[45],"targeting":[47],"multiple":[48],"acquisition":[50],"modalities":[51],"seeks":[53],"comprehend":[55],"functioning":[57],"systems":[60],"at":[61,84],"many":[62],"different":[63],"levels.":[64],"Bioinformaticians":[65],"need":[66],"be":[68],"cognizant":[69],"diverse":[71],"scientific":[72],"fields:":[73],"basic":[74],"molecular":[76],"biology,":[77],"genetics,":[78],"mathematics,":[79],"statistics,":[80],"computer":[82],"science":[83],"a":[85,89],"minimum,":[86],"thus":[87],"requiring":[88],"thoroughly":[90],"set":[92],"skills":[94],"successfully":[96],"carry":[97],"out":[98],"their":[99],"duties.":[100],"Due":[101],"growing":[104],"importance":[105],"bioinformatics":[107],"enabling":[109],"modern":[110],"biomedical":[111],"research,":[112],"programs":[113],"core":[115],"facilities":[116],"have":[117],"been":[118],"established":[119],"most":[121],"academic":[122],"institutions":[123],"developed":[126],"world":[127],"over":[128],"last":[130],"30":[131],"years.":[132]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1}],"updated_date":"2026-07-02T09:51:11.867554","created_date":"2025-10-10T00:00:00"}
