{"id":"https://openalex.org/W3211127983","doi":"https://doi.org/10.1371/journal.pcbi.1009503","title":"linus: Conveniently explore, share, and present large-scale biological trajectory data in a web browser","display_name":"linus: Conveniently explore, share, and present large-scale biological trajectory data in a web browser","publication_year":2021,"publication_date":"2021-11-01","ids":{"openalex":"https://openalex.org/W3211127983","doi":"https://doi.org/10.1371/journal.pcbi.1009503","mag":"3211127983","pmid":"https://pubmed.ncbi.nlm.nih.gov/34723958"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1009503","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1009503","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1371/journal.pcbi.1009503","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5011154591","display_name":"Johannes Waschke","orcid":"https://orcid.org/0000-0002-2334-3511"},"institutions":[{"id":"https://openalex.org/I147765834","display_name":"Leipzig University of Applied Sciences","ror":"https://ror.org/03xgcq477","country_code":"DE","type":"education","lineage":["https://openalex.org/I147765834"]},{"id":"https://openalex.org/I4210130445","display_name":"Max Planck Institute for Human Cognitive and Brain Sciences","ror":"https://ror.org/0387jng26","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210130445"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Johannes Waschke","raw_affiliation_strings":["Faculty of Computer Science and Media, Leipzig University of Applied Sciences, Leipzig, Germany","Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany"],"raw_orcid":"https://orcid.org/0000-0002-2334-3511","affiliations":[{"raw_affiliation_string":"Faculty of Computer Science and Media, Leipzig University of Applied Sciences, Leipzig, Germany","institution_ids":["https://openalex.org/I147765834"]},{"raw_affiliation_string":"Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany","institution_ids":["https://openalex.org/I4210130445"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102737743","display_name":"Mario Hlawitschka","orcid":"https://orcid.org/0000-0003-2364-0986"},"institutions":[{"id":"https://openalex.org/I147765834","display_name":"Leipzig University of Applied Sciences","ror":"https://ror.org/03xgcq477","country_code":"DE","type":"education","lineage":["https://openalex.org/I147765834"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Mario Hlawitschka","raw_affiliation_strings":["Faculty of Computer Science and Media, Leipzig University of Applied Sciences, Leipzig, Germany"],"raw_orcid":"https://orcid.org/0000-0003-2364-0986","affiliations":[{"raw_affiliation_string":"Faculty of Computer Science and Media, Leipzig University of Applied Sciences, Leipzig, Germany","institution_ids":["https://openalex.org/I147765834"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087949712","display_name":"Kerim Anla\u015f","orcid":"https://orcid.org/0000-0002-9272-8626"},"institutions":[{"id":"https://openalex.org/I4210097140","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/010jaxs89","country_code":"ES","type":"government","lineage":["https://openalex.org/I4210097140","https://openalex.org/I4210138560"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Kerim Anlas","raw_affiliation_strings":["EMBL Barcelona, Barcelona, Spain"],"raw_orcid":"https://orcid.org/0000-0002-9272-8626","affiliations":[{"raw_affiliation_string":"EMBL Barcelona, Barcelona, Spain","institution_ids":["https://openalex.org/I4210097140"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021270248","display_name":"Vikas Trivedi","orcid":"https://orcid.org/0000-0003-0953-0553"},"institutions":[{"id":"https://openalex.org/I4210097140","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/010jaxs89","country_code":"ES","type":"government","lineage":["https://openalex.org/I4210097140","https://openalex.org/I4210138560"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Vikas Trivedi","raw_affiliation_strings":["EMBL Barcelona, Barcelona, Spain","EMBL Heidelberg, Developmental Biology Unit, Heidelberg, Germany"],"raw_orcid":"https://orcid.org/0000-0003-0953-0553","affiliations":[{"raw_affiliation_string":"EMBL Barcelona, Barcelona, Spain","institution_ids":["https://openalex.org/I4210097140"]},{"raw_affiliation_string":"EMBL Heidelberg, Developmental Biology Unit, Heidelberg, Germany","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078023563","display_name":"Ingo Roeder","orcid":"https://orcid.org/0000-0002-6741-0608"},"institutions":[{"id":"https://openalex.org/I4210099379","display_name":"Zimmer Biomet (Germany)","ror":"https://ror.org/016731f38","country_code":"DE","type":"company","lineage":["https://openalex.org/I4210099379","https://openalex.org/I4210115238"]},{"id":"https://openalex.org/I4210111460","display_name":"National Center for Tumor Diseases","ror":"https://ror.org/01txwsw02","country_code":"DE","type":"funder","lineage":["https://openalex.org/I4210111460"]},{"id":"https://openalex.org/I4210162051","display_name":"University Hospital Carl Gustav Carus","ror":"https://ror.org/04za5zm41","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I4210162051"]},{"id":"https://openalex.org/I4387153526","display_name":"Nationales Centrum f\u00fcr Tumorerkrankungen Dresden","ror":"https://ror.org/01zy07c70","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I1305996414","https://openalex.org/I1305996414","https://openalex.org/I17937529","https://openalex.org/I2801798921","https://openalex.org/I4210162051","https://openalex.org/I4387153526","https://openalex.org/I78650965"]},{"id":"https://openalex.org/I78650965","display_name":"Technische Universit\u00e4t Dresden","ror":"https://ror.org/042aqky30","country_code":"DE","type":"education","lineage":["https://openalex.org/I78650965"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Ingo Roeder","raw_affiliation_strings":["Institute for Medical Informatics and Biometry, Carl Gustav Carus Faculty of Medicine, TU Dresden, Dresden, Germany","National Center of Tumor Diseases (NCT), Partner Site Dresden, Dresden, Germany"],"raw_orcid":"https://orcid.org/0000-0002-6741-0608","affiliations":[{"raw_affiliation_string":"Institute for Medical Informatics and Biometry, Carl Gustav Carus Faculty of Medicine, TU Dresden, Dresden, Germany","institution_ids":["https://openalex.org/I4210162051","https://openalex.org/I4210099379","https://openalex.org/I78650965"]},{"raw_affiliation_string":"National Center of Tumor Diseases (NCT), Partner Site Dresden, Dresden, Germany","institution_ids":["https://openalex.org/I4210111460","https://openalex.org/I4387153526"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005769811","display_name":"Jan Huisken","orcid":"https://orcid.org/0000-0001-7250-3756"},"institutions":[{"id":"https://openalex.org/I29680605","display_name":"Morgridge Institute for Research","ror":"https://ror.org/05cb4rb43","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I135310074","https://openalex.org/I29680605"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jan Huisken","raw_affiliation_strings":["Morgridge Institute for Research, Madison, Wisconsin, United States of America"],"raw_orcid":"https://orcid.org/0000-0001-7250-3756","affiliations":[{"raw_affiliation_string":"Morgridge Institute for Research, Madison, Wisconsin, United States of America","institution_ids":["https://openalex.org/I29680605"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5085986753","display_name":"Nico Scherf","orcid":"https://orcid.org/0000-0003-4003-9121"},"institutions":[{"id":"https://openalex.org/I4210099379","display_name":"Zimmer Biomet (Germany)","ror":"https://ror.org/016731f38","country_code":"DE","type":"company","lineage":["https://openalex.org/I4210099379","https://openalex.org/I4210115238"]},{"id":"https://openalex.org/I4210130445","display_name":"Max Planck Institute for Human Cognitive and Brain Sciences","ror":"https://ror.org/0387jng26","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210130445"]},{"id":"https://openalex.org/I4210162051","display_name":"University Hospital Carl Gustav Carus","ror":"https://ror.org/04za5zm41","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I4210162051"]},{"id":"https://openalex.org/I4401726909","display_name":"Center for Scalable Data Analytics and Artificial Intelligence","ror":"https://ror.org/01t4ttr56","country_code":"DE","type":"education","lineage":["https://openalex.org/I4401726909","https://openalex.org/I78650965","https://openalex.org/I926574661"]},{"id":"https://openalex.org/I78650965","display_name":"Technische Universit\u00e4t Dresden","ror":"https://ror.org/042aqky30","country_code":"DE","type":"education","lineage":["https://openalex.org/I78650965"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Nico Scherf","raw_affiliation_strings":["Center for Scalable Data Analytics and Artificial Intelligence ScaDS.AI, Dresden/Leipzig, Leipzig, Germany","Institute for Medical Informatics and Biometry, Carl Gustav Carus Faculty of Medicine, TU Dresden, Dresden, Germany","Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany"],"raw_orcid":"https://orcid.org/0000-0003-4003-9121","affiliations":[{"raw_affiliation_string":"Center for Scalable Data Analytics and Artificial Intelligence ScaDS.AI, Dresden/Leipzig, Leipzig, Germany","institution_ids":["https://openalex.org/I4401726909"]},{"raw_affiliation_string":"Institute for Medical Informatics and Biometry, Carl Gustav Carus Faculty of Medicine, TU Dresden, Dresden, Germany","institution_ids":["https://openalex.org/I4210162051","https://openalex.org/I4210099379","https://openalex.org/I78650965"]},{"raw_affiliation_string":"Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany","institution_ids":["https://openalex.org/I4210130445"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5085986753"],"corresponding_institution_ids":["https://openalex.org/I4210099379","https://openalex.org/I4210130445","https://openalex.org/I4210162051","https://openalex.org/I4401726909","https://openalex.org/I78650965"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":0.194,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.50769852,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"17","issue":"11","first_page":"e1009503","last_page":"e1009503"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10799","display_name":"Data Visualization and Analytics","score":0.9890999794006348,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10799","display_name":"Data Visualization and Analytics","score":0.9890999794006348,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9718000292778015,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10895","display_name":"Species Distribution and Climate Change","score":0.9679999947547913,"subfield":{"id":"https://openalex.org/subfields/2302","display_name":"Ecological Modeling"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7782996892929077},{"id":"https://openalex.org/keywords/python","display_name":"Python (programming language)","score":0.684332013130188},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.6515090465545654},{"id":"https://openalex.org/keywords/trajectory","display_name":"Trajectory","score":0.5855191946029663},{"id":"https://openalex.org/keywords/data-visualization","display_name":"Data visualization","score":0.5707566142082214},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4797405004501343},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.46944093704223633},{"id":"https://openalex.org/keywords/human\u2013computer-interaction","display_name":"Human\u2013computer interaction","score":0.44644710421562195},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.42993229627609253},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.37926971912384033},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.2994825839996338},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.09522294998168945}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7782996892929077},{"id":"https://openalex.org/C519991488","wikidata":"https://www.wikidata.org/wiki/Q28865","display_name":"Python (programming language)","level":2,"score":0.684332013130188},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.6515090465545654},{"id":"https://openalex.org/C13662910","wikidata":"https://www.wikidata.org/wiki/Q193139","display_name":"Trajectory","level":2,"score":0.5855191946029663},{"id":"https://openalex.org/C172367668","wikidata":"https://www.wikidata.org/wiki/Q6504956","display_name":"Data visualization","level":3,"score":0.5707566142082214},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4797405004501343},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.46944093704223633},{"id":"https://openalex.org/C107457646","wikidata":"https://www.wikidata.org/wiki/Q207434","display_name":"Human\u2013computer interaction","level":1,"score":0.44644710421562195},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.42993229627609253},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.37926971912384033},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.2994825839996338},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.09522294998168945},{"id":"https://openalex.org/C1276947","wikidata":"https://www.wikidata.org/wiki/Q333","display_name":"Astronomy","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D033181","descriptor_name":"Information Dissemination","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D033181","descriptor_name":"Information Dissemination","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D033181","descriptor_name":"Information Dissemination","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":7,"locations":[{"id":"doi:10.1371/journal.pcbi.1009503","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1009503","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:34723958","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34723958","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:doaj.org/article:b5a0ed5bb1d9464189b5206b3878d55f","is_oa":true,"landing_page_url":"https://doaj.org/article/b5a0ed5bb1d9464189b5206b3878d55f","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 17, Iss 11, p e1009503 (2021)","raw_type":"article"},{"id":"pmh:oai:doaj.org/article:eec9dbd763bb49459c9332f2f527001e","is_oa":true,"landing_page_url":"https://doaj.org/article/eec9dbd763bb49459c9332f2f527001e","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 17, Iss 11 (2021)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:7474838","is_oa":true,"landing_page_url":"http://europepmc.org/pmc/articles/PMC8584757","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:8584757","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8584757","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"},{"id":"pmh:oai:pure.mpg.de:item_3279847","is_oa":false,"landing_page_url":"http://hdl.handle.net/21.11116/0000-0007-D266-9","pdf_url":null,"source":{"id":"https://openalex.org/S4306400654","display_name":"MPG.PuRe (Max Planck Society)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I149899117","host_organization_name":"Max Planck Society","host_organization_lineage":["https://openalex.org/I149899117"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"info:eu-repo/semantics/workingPaper"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1009503","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1009503","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320314023","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/050589e39"},{"id":"https://openalex.org/F4320324680","display_name":"Max-Planck-Institut f\u00fcr Kognitions- und Neurowissenschaften","ror":"https://ror.org/0387jng26"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":21,"referenced_works":["https://openalex.org/W1479970844","https://openalex.org/W1580913419","https://openalex.org/W2005161190","https://openalex.org/W2030233281","https://openalex.org/W2058997872","https://openalex.org/W2138199375","https://openalex.org/W2163314583","https://openalex.org/W2466950654","https://openalex.org/W2529052661","https://openalex.org/W2811106513","https://openalex.org/W2896103138","https://openalex.org/W2908783938","https://openalex.org/W2921256580","https://openalex.org/W2966239404","https://openalex.org/W2969513787","https://openalex.org/W2972478535","https://openalex.org/W2972761313","https://openalex.org/W2975775589","https://openalex.org/W2995034929","https://openalex.org/W2999100257","https://openalex.org/W3028077246"],"related_works":["https://openalex.org/W2013728941","https://openalex.org/W4225274103","https://openalex.org/W2154046714","https://openalex.org/W2189613078","https://openalex.org/W2579659702","https://openalex.org/W2923661510","https://openalex.org/W1574055964","https://openalex.org/W1965329638","https://openalex.org/W2542318691","https://openalex.org/W3160708108"],"abstract_inverted_index":{"In":[0],"biology,":[1],"we":[2,52],"are":[3],"often":[4],"confronted":[5],"with":[6,30,85],"information-rich,":[7],"large-scale":[8],"trajectory":[9,81,115],"data,":[10,82],"but":[11],"exploring":[12,63],"and":[13,44,64,95],"communicating":[14],"patterns":[15,112],"in":[16,34,113],"such":[17,88],"data":[18,26],"can":[19,102],"be":[20,28,103],"a":[21,55,72,76],"cumbersome":[22],"task.":[23],"Ideally,":[24],"the":[25,60,108],"should":[27],"wrapped":[29],"an":[31,97],"interactive":[32,98],"visualisation":[33,100],"one":[35],"concise":[36],"packet":[37],"that":[38,79,101],"makes":[39,59],"it":[40],"straightforward":[41],"to":[42],"create":[43],"test":[45],"hypotheses":[46],"collaboratively.":[47],"To":[48],"address":[49],"these":[50],"challenges,":[51],"have":[53],"developed":[54],"tool,":[56],"linus,":[57],"which":[58],"process":[61],"of":[62,111],"sharing":[65],"3D":[66],"trajectories":[67],"as":[68,70,89],"easy":[69],"browsing":[71],"website.":[73],"We":[74],"provide":[75],"python":[77],"script":[78],"reads":[80],"enriches":[83],"them":[84],"additional":[86],"features":[87],"edge":[90],"bundling":[91],"or":[92],"custom":[93],"axes,":[94],"generates":[96],"web-based":[99],"shared":[104],"online.":[105],"linus":[106],"facilitates":[107],"collaborative":[109],"discovery":[110],"complex":[114],"data.":[116]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}