{"id":"https://openalex.org/W3193800710","doi":"https://doi.org/10.1371/journal.pcbi.1009306","title":"The impact of local assembly rules on RNA packaging in a T = 1 satellite plant virus","display_name":"The impact of local assembly rules on RNA packaging in a T = 1 satellite plant virus","publication_year":2021,"publication_date":"2021-08-24","ids":{"openalex":"https://openalex.org/W3193800710","doi":"https://doi.org/10.1371/journal.pcbi.1009306","mag":"3193800710","pmid":"https://pubmed.ncbi.nlm.nih.gov/34428224"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1009306","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1009306","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1371/journal.pcbi.1009306","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5014577331","display_name":"Sam R. Hill","orcid":"https://orcid.org/0000-0001-5288-6171"},"institutions":[{"id":"https://openalex.org/I52099693","display_name":"University of York","ror":"https://ror.org/04m01e293","country_code":"GB","type":"education","lineage":["https://openalex.org/I52099693"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Sam R. Hill","raw_affiliation_strings":["Department of Mathematics, University of York, York, United Kingdom","York Cross-Disciplinary Centre for Systems Analysis, University of York, York, United Kingdom"],"raw_orcid":"https://orcid.org/0000-0001-5288-6171","affiliations":[{"raw_affiliation_string":"Department of Mathematics, University of York, York, United Kingdom","institution_ids":["https://openalex.org/I52099693"]},{"raw_affiliation_string":"York Cross-Disciplinary Centre for Systems Analysis, University of York, York, United Kingdom","institution_ids":["https://openalex.org/I52099693"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089675833","display_name":"Reidun Twarock","orcid":null},"institutions":[{"id":"https://openalex.org/I52099693","display_name":"University of York","ror":"https://ror.org/04m01e293","country_code":"GB","type":"education","lineage":["https://openalex.org/I52099693"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Reidun Twarock","raw_affiliation_strings":["Department of Biology, University of York, York, United Kingdom","Department of Mathematics, University of York, York, United Kingdom","York Cross-Disciplinary Centre for Systems Analysis, University of York, York, United Kingdom"],"raw_orcid":"https://orcid.org/0000-0002-1824-2003","affiliations":[{"raw_affiliation_string":"Department of Biology, University of York, York, United Kingdom","institution_ids":["https://openalex.org/I52099693"]},{"raw_affiliation_string":"Department of Mathematics, University of York, York, United Kingdom","institution_ids":["https://openalex.org/I52099693"]},{"raw_affiliation_string":"York Cross-Disciplinary Centre for Systems Analysis, University of York, York, United Kingdom","institution_ids":["https://openalex.org/I52099693"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5028462860","display_name":"Eric C. Dykeman","orcid":"https://orcid.org/0000-0002-8344-8446"},"institutions":[{"id":"https://openalex.org/I52099693","display_name":"University of York","ror":"https://ror.org/04m01e293","country_code":"GB","type":"education","lineage":["https://openalex.org/I52099693"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Eric C. Dykeman","raw_affiliation_strings":["Department of Mathematics, University of York, York, United Kingdom","York Cross-Disciplinary Centre for Systems Analysis, University of York, York, United Kingdom"],"raw_orcid":"https://orcid.org/0000-0002-8344-8446","affiliations":[{"raw_affiliation_string":"Department of Mathematics, University of York, York, United Kingdom","institution_ids":["https://openalex.org/I52099693"]},{"raw_affiliation_string":"York Cross-Disciplinary Centre for Systems Analysis, University of York, York, United Kingdom","institution_ids":["https://openalex.org/I52099693"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5028462860"],"corresponding_institution_ids":["https://openalex.org/I52099693"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":0.6755,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.71716514,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"17","issue":"8","first_page":"e1009306","last_page":"e1009306"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11048","display_name":"Bacteriophages and microbial interactions","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11048","display_name":"Bacteriophages and microbial interactions","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10494","display_name":"Plant Virus Research Studies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.993399977684021,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/capsid","display_name":"Capsid","score":0.8526719808578491},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.8074078559875488},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5476785898208618},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5268320441246033},{"id":"https://openalex.org/keywords/nucleic-acid","display_name":"Nucleic acid","score":0.510532021522522},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5097817778587341},{"id":"https://openalex.org/keywords/plant-virus","display_name":"Plant virus","score":0.495762437582016},{"id":"https://openalex.org/keywords/rna-virus","display_name":"RNA virus","score":0.4613194167613983},{"id":"https://openalex.org/keywords/bacteriophage-ms2","display_name":"Bacteriophage MS2","score":0.46040403842926025},{"id":"https://openalex.org/keywords/virus","display_name":"Virus","score":0.4426991045475006},{"id":"https://openalex.org/keywords/bacteriophage","display_name":"Bacteriophage","score":0.4130139946937561},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.339863121509552},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.20288917422294617},{"id":"https://openalex.org/keywords/escherichia-coli","display_name":"Escherichia coli","score":0.08747461438179016}],"concepts":[{"id":"https://openalex.org/C202878990","wikidata":"https://www.wikidata.org/wiki/Q830465","display_name":"Capsid","level":3,"score":0.8526719808578491},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.8074078559875488},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5476785898208618},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5268320441246033},{"id":"https://openalex.org/C24107716","wikidata":"https://www.wikidata.org/wiki/Q123619","display_name":"Nucleic acid","level":2,"score":0.510532021522522},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5097817778587341},{"id":"https://openalex.org/C109110057","wikidata":"https://www.wikidata.org/wiki/Q1495434","display_name":"Plant virus","level":3,"score":0.495762437582016},{"id":"https://openalex.org/C2779174946","wikidata":"https://www.wikidata.org/wiki/Q751911","display_name":"RNA virus","level":4,"score":0.4613194167613983},{"id":"https://openalex.org/C2775940340","wikidata":"https://www.wikidata.org/wiki/Q4840020","display_name":"Bacteriophage MS2","level":5,"score":0.46040403842926025},{"id":"https://openalex.org/C2522874641","wikidata":"https://www.wikidata.org/wiki/Q808","display_name":"Virus","level":2,"score":0.4426991045475006},{"id":"https://openalex.org/C2776441376","wikidata":"https://www.wikidata.org/wiki/Q165028","display_name":"Bacteriophage","level":4,"score":0.4130139946937561},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.339863121509552},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.20288917422294617},{"id":"https://openalex.org/C547475151","wikidata":"https://www.wikidata.org/wiki/Q25419","display_name":"Escherichia coli","level":3,"score":0.08747461438179016},{"id":"https://openalex.org/C2994092193","wikidata":"https://www.wikidata.org/wiki/Q16769446","display_name":"Coat protein","level":4,"score":0.0}],"mesh":[{"descriptor_ui":"D005814","descriptor_name":"Genes, Viral","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005814","descriptor_name":"Genes, Viral","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005814","descriptor_name":"Genes, Viral","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005814","descriptor_name":"Genes, Viral","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005814","descriptor_name":"Genes, Viral","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009690","descriptor_name":"Nucleic Acid Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009690","descriptor_name":"Nucleic Acid Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009690","descriptor_name":"Nucleic Acid Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009690","descriptor_name":"Nucleic Acid Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009690","descriptor_name":"Nucleic Acid Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010942","descriptor_name":"Plant Viruses","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010942","descriptor_name":"Plant Viruses","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010942","descriptor_name":"Plant Viruses","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010942","descriptor_name":"Plant Viruses","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010942","descriptor_name":"Plant Viruses","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010942","descriptor_name":"Plant Viruses","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D010942","descriptor_name":"Plant Viruses","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D010942","descriptor_name":"Plant Viruses","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D010942","descriptor_name":"Plant Viruses","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D010942","descriptor_name":"Plant Viruses","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012526","descriptor_name":"Satellite Viruses","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012526","descriptor_name":"Satellite Viruses","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012526","descriptor_name":"Satellite Viruses","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012526","descriptor_name":"Satellite Viruses","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012526","descriptor_name":"Satellite Viruses","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D013269","descriptor_name":"Stochastic Processes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013269","descriptor_name":"Stochastic Processes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013269","descriptor_name":"Stochastic Processes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013269","descriptor_name":"Stochastic Processes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013269","descriptor_name":"Stochastic Processes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019065","descriptor_name":"Virus Assembly","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019065","descriptor_name":"Virus Assembly","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019065","descriptor_name":"Virus Assembly","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019065","descriptor_name":"Virus Assembly","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019065","descriptor_name":"Virus Assembly","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D036022","descriptor_name":"Capsid Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D036022","descriptor_name":"Capsid Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D036022","descriptor_name":"Capsid Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D036022","descriptor_name":"Capsid Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D036022","descriptor_name":"Capsid Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1371/journal.pcbi.1009306","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1009306","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:34428224","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34428224","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:doaj.org/article:52807203e35a4339a203ffa68379a6ab","is_oa":true,"landing_page_url":"https://doaj.org/article/52807203e35a4339a203ffa68379a6ab","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 17, Iss 8, p e1009306 (2021)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:8384211","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8384211","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1009306","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1009306","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2153937574","display_name":"New perspectives for anti-viral therapy: The regulatory roles of genomic RNA in virus assembly, infection and evolution.","funder_award_id":"110145","funder_id":"https://openalex.org/F4320311904","funder_display_name":"Wellcome Trust"},{"id":"https://openalex.org/G2282517512","display_name":"Geometry as a key to the virosphere: Unmasking the fundamental roles of geometry in virus structure, evolution and pathology","funder_award_id":"EP/R023204/1","funder_id":"https://openalex.org/F4320334627","funder_display_name":"Engineering and Physical Sciences Research Council"},{"id":"https://openalex.org/G4006714241","display_name":null,"funder_award_id":"110145, 110146","funder_id":"https://openalex.org/F4320307874","funder_display_name":"Wellcome"},{"id":"https://openalex.org/G4350890507","display_name":"New perspectives for anti-viral therapy: The regulatory roles of genomic RNA in virus assembly, infection and evolution.","funder_award_id":"110146","funder_id":"https://openalex.org/F4320311904","funder_display_name":"Wellcome Trust"},{"id":"https://openalex.org/G5797131149","display_name":null,"funder_award_id":"EP/R023204/1","funder_id":"https://openalex.org/F4320334627","funder_display_name":"Engineering and Physical Sciences Research Council"},{"id":"https://openalex.org/G7855973331","display_name":null,"funder_award_id":"110145","funder_id":"https://openalex.org/F4320320298","funder_display_name":"University of Leeds"},{"id":"https://openalex.org/G8644340736","display_name":null,"funder_award_id":"110146","funder_id":"https://openalex.org/F4320320298","funder_display_name":"University of Leeds"}],"funders":[{"id":"https://openalex.org/F4320307874","display_name":"Wellcome","ror":"https://ror.org/029chgv08"},{"id":"https://openalex.org/F4320311904","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08"},{"id":"https://openalex.org/F4320320298","display_name":"University of Leeds","ror":"https://ror.org/024mrxd33"},{"id":"https://openalex.org/F4320334627","display_name":"Engineering and Physical Sciences Research Council","ror":"https://ror.org/0439y7842"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":33,"referenced_works":["https://openalex.org/W1597335111","https://openalex.org/W1775400131","https://openalex.org/W1966225171","https://openalex.org/W1975156373","https://openalex.org/W1978628445","https://openalex.org/W1978998927","https://openalex.org/W1982115020","https://openalex.org/W1983322280","https://openalex.org/W1988798807","https://openalex.org/W2004229366","https://openalex.org/W2009072526","https://openalex.org/W2046182783","https://openalex.org/W2053914171","https://openalex.org/W2061344243","https://openalex.org/W2075663882","https://openalex.org/W2111667400","https://openalex.org/W2113318971","https://openalex.org/W2142951375","https://openalex.org/W2155418451","https://openalex.org/W2320136041","https://openalex.org/W2395123599","https://openalex.org/W2517678370","https://openalex.org/W2586550625","https://openalex.org/W2734478571","https://openalex.org/W2741907005","https://openalex.org/W2743063092","https://openalex.org/W2762604729","https://openalex.org/W2901391245","https://openalex.org/W2963584999","https://openalex.org/W2999050204","https://openalex.org/W3006462722","https://openalex.org/W3021494186","https://openalex.org/W6638932540"],"related_works":["https://openalex.org/W1961120812","https://openalex.org/W2066862872","https://openalex.org/W1998773331","https://openalex.org/W2471075513","https://openalex.org/W2370558226","https://openalex.org/W2889790107","https://openalex.org/W2980952309","https://openalex.org/W2001339555","https://openalex.org/W2335364655","https://openalex.org/W2938650863"],"abstract_inverted_index":{"The":[0],"vast":[1],"majority":[2],"of":[3,6,23,31,41,50,57,66,142,149,194],"viruses":[4,79,89,197],"consist":[5],"a":[7,12,24,71,117,147,182],"nucleic":[8],"acid":[9],"surrounded":[10],"by":[11],"protective":[13],"icosahedral":[14],"protein":[15,102,127],"shell":[16,103,128],"called":[17],"the":[18,27,32,39,48,55,58,67,82,101,107,126,133,154,192],"capsid.":[19],"During":[20],"viral":[21],"infection":[22],"host":[25],"cell,":[26],"timing":[28],"and":[29,85,104,129,204],"efficiency":[30],"assembly":[33,56,119,141,156,165,189],"process":[34,95],"is":[35],"important":[36],"for":[37,191],"ensuring":[38],"production":[40],"infectious":[42],"new":[43],"progeny":[44],"virus":[45],"particles.":[46],"In":[47,76],"class":[49],"single-stranded":[51],"RNA":[52,87,108,134,176],"(ssRNA)":[53],"viruses,":[54],"capsid":[59],"takes":[60],"place":[61],"in":[62,70,106,132,159,168,208],"tandem":[63],"with":[64,163,175],"packaging":[65,114,130,177],"ssRNA":[68,78,196],"genome":[69,109],"highly":[72,139],"cooperative":[73,94,123],"co-assembly":[74],"process.":[75],"simple":[77,150,184],"such":[80,90],"as":[81,91],"bacteriophage":[83],"MS2":[84],"small":[86],"plant":[88],"STNV,":[92],"this":[93],"results":[96,158,180],"from":[97,146],"multiple":[98],"interactions":[99,124,174],"between":[100,125],"sites":[105],"which":[110,121,167],"have":[111],"been":[112],"termed":[113],"signals.":[115,178],"Using":[116],"stochastic":[118],"algorithm":[120],"includes":[122],"signals":[131],"genome,":[135],"we":[136],"demonstrate":[137],"that":[138],"efficient":[140],"STNV":[143],"capsids":[144],"arises":[145],"set":[148],"local":[151,155,188],"rules.":[152],"Altering":[153],"rules":[157,190],"different":[160],"nucleation":[161],"scenarios":[162],"varying":[164],"efficiencies,":[166],"some":[169,195],"cases":[170],"depend":[171],"strongly":[172],"on":[173,187],"Our":[179],"provide":[181],"potential":[183],"explanation":[185],"based":[186],"ability":[193],"to":[198],"spontaneously":[199],"assemble":[200],"around":[201],"charged":[202],"polymers":[203],"other":[205],"non-viral":[206],"RNAs":[207],"vitro.":[209]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1}],"updated_date":"2026-05-06T08:25:59.206177","created_date":"2025-10-10T00:00:00"}