{"id":"https://openalex.org/W3186633320","doi":"https://doi.org/10.1371/journal.pcbi.1009149","title":"Covasim: An agent-based model of COVID-19 dynamics and interventions","display_name":"Covasim: An agent-based model of COVID-19 dynamics and interventions","publication_year":2021,"publication_date":"2021-07-26","ids":{"openalex":"https://openalex.org/W3186633320","doi":"https://doi.org/10.1371/journal.pcbi.1009149","mag":"3186633320","pmid":"https://pubmed.ncbi.nlm.nih.gov/34310589"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1009149","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1009149","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1371/journal.pcbi.1009149","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5036326609","display_name":"Cliff C. Kerr","orcid":"https://orcid.org/0000-0003-2517-2354"},"institutions":[{"id":"https://openalex.org/I1303444417","display_name":"Gates Foundation","ror":"https://ror.org/0456r8d26","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1303444417"]},{"id":"https://openalex.org/I4210161647","display_name":"Institute for Disease Modeling","ror":"https://ror.org/0532gcg76","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210161647"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Cliff C. Kerr","raw_affiliation_strings":["Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America"],"raw_orcid":"https://orcid.org/0000-0003-2517-2354","affiliations":[{"raw_affiliation_string":"Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America","institution_ids":["https://openalex.org/I1303444417","https://openalex.org/I4210161647"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080736326","display_name":"Robyn M. Stuart","orcid":"https://orcid.org/0000-0001-5482-9584"},"institutions":[{"id":"https://openalex.org/I124055696","display_name":"University of Copenhagen","ror":"https://ror.org/035b05819","country_code":"DK","type":"education","lineage":["https://openalex.org/I124055696"]},{"id":"https://openalex.org/I145902186","display_name":"Burnet Institute","ror":"https://ror.org/05ktbsm52","country_code":"AU","type":"nonprofit","lineage":["https://openalex.org/I145902186"]}],"countries":["AU","DK"],"is_corresponding":true,"raw_author_name":"Robyn M. Stuart","raw_affiliation_strings":["Burnet Institute, Melbourne, Victoria, Australia","Department of Mathematical Sciences, University of Copenhagen, Copenhagen, Denmark"],"raw_orcid":"https://orcid.org/0000-0001-5482-9584","affiliations":[{"raw_affiliation_string":"Burnet Institute, Melbourne, Victoria, Australia","institution_ids":["https://openalex.org/I145902186"]},{"raw_affiliation_string":"Department of Mathematical Sciences, University of Copenhagen, Copenhagen, Denmark","institution_ids":["https://openalex.org/I124055696"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086508834","display_name":"Dina Mistry","orcid":"https://orcid.org/0000-0002-1598-1388"},"institutions":[{"id":"https://openalex.org/I1303444417","display_name":"Gates Foundation","ror":"https://ror.org/0456r8d26","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1303444417"]},{"id":"https://openalex.org/I4210161647","display_name":"Institute for Disease Modeling","ror":"https://ror.org/0532gcg76","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210161647"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Dina Mistry","raw_affiliation_strings":["Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America"],"raw_orcid":"https://orcid.org/0000-0002-1598-1388","affiliations":[{"raw_affiliation_string":"Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America","institution_ids":["https://openalex.org/I1303444417","https://openalex.org/I4210161647"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090284787","display_name":"Romesh Abeysuriya","orcid":"https://orcid.org/0000-0002-9618-6457"},"institutions":[{"id":"https://openalex.org/I145902186","display_name":"Burnet Institute","ror":"https://ror.org/05ktbsm52","country_code":"AU","type":"nonprofit","lineage":["https://openalex.org/I145902186"]}],"countries":["AU"],"is_corresponding":true,"raw_author_name":"Romesh G. Abeysuriya","raw_affiliation_strings":["Burnet Institute, Melbourne, Victoria, Australia"],"raw_orcid":"https://orcid.org/0000-0002-9618-6457","affiliations":[{"raw_affiliation_string":"Burnet Institute, Melbourne, Victoria, Australia","institution_ids":["https://openalex.org/I145902186"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028482299","display_name":"Katherine Rosenfeld","orcid":"https://orcid.org/0000-0001-8902-9990"},"institutions":[{"id":"https://openalex.org/I1303444417","display_name":"Gates Foundation","ror":"https://ror.org/0456r8d26","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1303444417"]},{"id":"https://openalex.org/I4210161647","display_name":"Institute for Disease Modeling","ror":"https://ror.org/0532gcg76","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210161647"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Katherine Rosenfeld","raw_affiliation_strings":["Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America"],"raw_orcid":"https://orcid.org/0000-0001-8902-9990","affiliations":[{"raw_affiliation_string":"Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America","institution_ids":["https://openalex.org/I1303444417","https://openalex.org/I4210161647"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063042519","display_name":"Gregory R. Hart","orcid":"https://orcid.org/0000-0003-0576-7430"},"institutions":[{"id":"https://openalex.org/I1303444417","display_name":"Gates Foundation","ror":"https://ror.org/0456r8d26","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1303444417"]},{"id":"https://openalex.org/I4210161647","display_name":"Institute for Disease Modeling","ror":"https://ror.org/0532gcg76","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210161647"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Gregory R. Hart","raw_affiliation_strings":["Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America"],"raw_orcid":"https://orcid.org/0000-0003-0576-7430","affiliations":[{"raw_affiliation_string":"Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America","institution_ids":["https://openalex.org/I1303444417","https://openalex.org/I4210161647"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044387851","display_name":"Rafael C. N\u00fa\u00f1ez","orcid":null},"institutions":[{"id":"https://openalex.org/I1303444417","display_name":"Gates Foundation","ror":"https://ror.org/0456r8d26","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1303444417"]},{"id":"https://openalex.org/I4210161647","display_name":"Institute for Disease Modeling","ror":"https://ror.org/0532gcg76","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210161647"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Rafael C. N\u00fa\u00f1ez","raw_affiliation_strings":["Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America","institution_ids":["https://openalex.org/I1303444417","https://openalex.org/I4210161647"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077250057","display_name":"Jamie A. Cohen","orcid":"https://orcid.org/0000-0002-8479-1860"},"institutions":[{"id":"https://openalex.org/I1303444417","display_name":"Gates Foundation","ror":"https://ror.org/0456r8d26","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1303444417"]},{"id":"https://openalex.org/I4210161647","display_name":"Institute for Disease Modeling","ror":"https://ror.org/0532gcg76","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210161647"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Jamie A. Cohen","raw_affiliation_strings":["Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America"],"raw_orcid":"https://orcid.org/0000-0002-8479-1860","affiliations":[{"raw_affiliation_string":"Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America","institution_ids":["https://openalex.org/I1303444417","https://openalex.org/I4210161647"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070600716","display_name":"Prashanth Selvaraj","orcid":"https://orcid.org/0000-0001-7565-2300"},"institutions":[{"id":"https://openalex.org/I1303444417","display_name":"Gates Foundation","ror":"https://ror.org/0456r8d26","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1303444417"]},{"id":"https://openalex.org/I4210161647","display_name":"Institute for Disease Modeling","ror":"https://ror.org/0532gcg76","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210161647"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Prashanth Selvaraj","raw_affiliation_strings":["Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America"],"raw_orcid":"https://orcid.org/0000-0001-7565-2300","affiliations":[{"raw_affiliation_string":"Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America","institution_ids":["https://openalex.org/I1303444417","https://openalex.org/I4210161647"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029040277","display_name":"Brittany Hagedorn","orcid":"https://orcid.org/0000-0002-1489-7168"},"institutions":[{"id":"https://openalex.org/I1303444417","display_name":"Gates Foundation","ror":"https://ror.org/0456r8d26","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1303444417"]},{"id":"https://openalex.org/I4210161647","display_name":"Institute for Disease Modeling","ror":"https://ror.org/0532gcg76","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210161647"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Brittany Hagedorn","raw_affiliation_strings":["Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America"],"raw_orcid":"https://orcid.org/0000-0002-1489-7168","affiliations":[{"raw_affiliation_string":"Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America","institution_ids":["https://openalex.org/I1303444417","https://openalex.org/I4210161647"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101849376","display_name":"Lauren George","orcid":"https://orcid.org/0000-0001-8729-9268"},"institutions":[{"id":"https://openalex.org/I1303444417","display_name":"Gates Foundation","ror":"https://ror.org/0456r8d26","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1303444417"]},{"id":"https://openalex.org/I4210161647","display_name":"Institute for Disease Modeling","ror":"https://ror.org/0532gcg76","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210161647"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Lauren George","raw_affiliation_strings":["Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America"],"raw_orcid":"https://orcid.org/0000-0001-8729-9268","affiliations":[{"raw_affiliation_string":"Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America","institution_ids":["https://openalex.org/I1303444417","https://openalex.org/I4210161647"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016823484","display_name":"Micha\u0142 Jastrz\u0119bski","orcid":null},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Micha\u0142 Jastrz\u0119bski","raw_affiliation_strings":["GitHub, Inc., San Francisco, California, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"GitHub, Inc., San Francisco, California, United States of America","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011784327","display_name":"Amanda S Izzo","orcid":null},"institutions":[{"id":"https://openalex.org/I1303444417","display_name":"Gates Foundation","ror":"https://ror.org/0456r8d26","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1303444417"]},{"id":"https://openalex.org/I4210161647","display_name":"Institute for Disease Modeling","ror":"https://ror.org/0532gcg76","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210161647"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Amanda S. Izzo","raw_affiliation_strings":["Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America","institution_ids":["https://openalex.org/I1303444417","https://openalex.org/I4210161647"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082963347","display_name":"Greer Fowler","orcid":null},"institutions":[{"id":"https://openalex.org/I1303444417","display_name":"Gates Foundation","ror":"https://ror.org/0456r8d26","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1303444417"]},{"id":"https://openalex.org/I4210161647","display_name":"Institute for Disease Modeling","ror":"https://ror.org/0532gcg76","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210161647"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Greer Fowler","raw_affiliation_strings":["Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America","institution_ids":["https://openalex.org/I1303444417","https://openalex.org/I4210161647"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079223383","display_name":"Anna Palmer","orcid":"https://orcid.org/0000-0002-7418-9446"},"institutions":[{"id":"https://openalex.org/I145902186","display_name":"Burnet Institute","ror":"https://ror.org/05ktbsm52","country_code":"AU","type":"nonprofit","lineage":["https://openalex.org/I145902186"]}],"countries":["AU"],"is_corresponding":true,"raw_author_name":"Anna Palmer","raw_affiliation_strings":["Burnet Institute, Melbourne, Victoria, Australia"],"raw_orcid":"https://orcid.org/0000-0002-7418-9446","affiliations":[{"raw_affiliation_string":"Burnet Institute, Melbourne, Victoria, Australia","institution_ids":["https://openalex.org/I145902186"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023757258","display_name":"Dominic Delport","orcid":"https://orcid.org/0000-0002-5331-5351"},"institutions":[{"id":"https://openalex.org/I145902186","display_name":"Burnet Institute","ror":"https://ror.org/05ktbsm52","country_code":"AU","type":"nonprofit","lineage":["https://openalex.org/I145902186"]}],"countries":["AU"],"is_corresponding":true,"raw_author_name":"Dominic Delport","raw_affiliation_strings":["Burnet Institute, Melbourne, Victoria, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Burnet Institute, Melbourne, Victoria, Australia","institution_ids":["https://openalex.org/I145902186"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023179056","display_name":"Nick Scott","orcid":"https://orcid.org/0000-0002-9213-0798"},"institutions":[{"id":"https://openalex.org/I145902186","display_name":"Burnet Institute","ror":"https://ror.org/05ktbsm52","country_code":"AU","type":"nonprofit","lineage":["https://openalex.org/I145902186"]}],"countries":["AU"],"is_corresponding":true,"raw_author_name":"Nick Scott","raw_affiliation_strings":["Burnet Institute, Melbourne, Victoria, Australia"],"raw_orcid":"https://orcid.org/0000-0002-9213-0798","affiliations":[{"raw_affiliation_string":"Burnet Institute, Melbourne, Victoria, Australia","institution_ids":["https://openalex.org/I145902186"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003824090","display_name":"Sherrie L. Kelly","orcid":"https://orcid.org/0000-0002-6232-5586"},"institutions":[{"id":"https://openalex.org/I145902186","display_name":"Burnet Institute","ror":"https://ror.org/05ktbsm52","country_code":"AU","type":"nonprofit","lineage":["https://openalex.org/I145902186"]}],"countries":["AU"],"is_corresponding":true,"raw_author_name":"Sherrie L. Kelly","raw_affiliation_strings":["Burnet Institute, Melbourne, Victoria, Australia"],"raw_orcid":"https://orcid.org/0000-0002-6232-5586","affiliations":[{"raw_affiliation_string":"Burnet Institute, Melbourne, Victoria, Australia","institution_ids":["https://openalex.org/I145902186"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058656801","display_name":"Caroline S. Bennette","orcid":null},"institutions":[{"id":"https://openalex.org/I1303444417","display_name":"Gates Foundation","ror":"https://ror.org/0456r8d26","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1303444417"]},{"id":"https://openalex.org/I4210161647","display_name":"Institute for Disease Modeling","ror":"https://ror.org/0532gcg76","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210161647"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Caroline S. Bennette","raw_affiliation_strings":["Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America","institution_ids":["https://openalex.org/I1303444417","https://openalex.org/I4210161647"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065405992","display_name":"Bradley G. Wagner","orcid":"https://orcid.org/0000-0002-0496-4689"},"institutions":[{"id":"https://openalex.org/I1303444417","display_name":"Gates Foundation","ror":"https://ror.org/0456r8d26","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1303444417"]},{"id":"https://openalex.org/I4210161647","display_name":"Institute for Disease Modeling","ror":"https://ror.org/0532gcg76","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210161647"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Bradley G. Wagner","raw_affiliation_strings":["Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America"],"raw_orcid":"https://orcid.org/0000-0002-0496-4689","affiliations":[{"raw_affiliation_string":"Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America","institution_ids":["https://openalex.org/I1303444417","https://openalex.org/I4210161647"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048557224","display_name":"Stewart T. Chang","orcid":"https://orcid.org/0000-0002-7604-9797"},"institutions":[{"id":"https://openalex.org/I1303444417","display_name":"Gates Foundation","ror":"https://ror.org/0456r8d26","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1303444417"]},{"id":"https://openalex.org/I4210161647","display_name":"Institute for Disease Modeling","ror":"https://ror.org/0532gcg76","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210161647"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Stewart T. Chang","raw_affiliation_strings":["Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America"],"raw_orcid":"https://orcid.org/0000-0002-7604-9797","affiliations":[{"raw_affiliation_string":"Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America","institution_ids":["https://openalex.org/I1303444417","https://openalex.org/I4210161647"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045800773","display_name":"Assaf P. Oron","orcid":"https://orcid.org/0000-0002-1896-6079"},"institutions":[{"id":"https://openalex.org/I1303444417","display_name":"Gates Foundation","ror":"https://ror.org/0456r8d26","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1303444417"]},{"id":"https://openalex.org/I4210161647","display_name":"Institute for Disease Modeling","ror":"https://ror.org/0532gcg76","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210161647"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Assaf P. Oron","raw_affiliation_strings":["Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America"],"raw_orcid":"https://orcid.org/0000-0002-1896-6079","affiliations":[{"raw_affiliation_string":"Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America","institution_ids":["https://openalex.org/I1303444417","https://openalex.org/I4210161647"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108192522","display_name":"Edward A. Wenger","orcid":null},"institutions":[{"id":"https://openalex.org/I1303444417","display_name":"Gates Foundation","ror":"https://ror.org/0456r8d26","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1303444417"]},{"id":"https://openalex.org/I4210161647","display_name":"Institute for Disease Modeling","ror":"https://ror.org/0532gcg76","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210161647"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Edward A. Wenger","raw_affiliation_strings":["Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America","institution_ids":["https://openalex.org/I1303444417","https://openalex.org/I4210161647"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042672436","display_name":"Jasmina Panovska\u2010Griffiths","orcid":"https://orcid.org/0000-0002-7720-1121"},"institutions":[{"id":"https://openalex.org/I2802952180","display_name":"Open Data Institute","ror":"https://ror.org/02hr72y72","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I2802952180"]},{"id":"https://openalex.org/I40120149","display_name":"University of Oxford","ror":"https://ror.org/052gg0110","country_code":"GB","type":"education","lineage":["https://openalex.org/I40120149"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Jasmina Panovska-Griffiths","raw_affiliation_strings":["Big Data Institute, University of Oxford, Oxford, United Kingdom","Wolfson Centre for Mathematical Biology and The Queen's College, University of Oxford, Oxford, United Kingdom"],"raw_orcid":"https://orcid.org/0000-0002-7720-1121","affiliations":[{"raw_affiliation_string":"Big Data Institute, University of Oxford, Oxford, United Kingdom","institution_ids":["https://openalex.org/I2802952180","https://openalex.org/I40120149"]},{"raw_affiliation_string":"Wolfson Centre for Mathematical Biology and The Queen's College, University of Oxford, Oxford, United Kingdom","institution_ids":["https://openalex.org/I40120149"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089906522","display_name":"Michael Famulare","orcid":"https://orcid.org/0000-0001-9275-7454"},"institutions":[{"id":"https://openalex.org/I1303444417","display_name":"Gates Foundation","ror":"https://ror.org/0456r8d26","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1303444417"]},{"id":"https://openalex.org/I4210161647","display_name":"Institute for Disease Modeling","ror":"https://ror.org/0532gcg76","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210161647"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Michael Famulare","raw_affiliation_strings":["Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America"],"raw_orcid":"https://orcid.org/0000-0001-9275-7454","affiliations":[{"raw_affiliation_string":"Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America","institution_ids":["https://openalex.org/I1303444417","https://openalex.org/I4210161647"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5030642208","display_name":"Daniel J. Klein","orcid":"https://orcid.org/0000-0003-0437-7916"},"institutions":[{"id":"https://openalex.org/I1303444417","display_name":"Gates Foundation","ror":"https://ror.org/0456r8d26","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1303444417"]},{"id":"https://openalex.org/I4210161647","display_name":"Institute for Disease Modeling","ror":"https://ror.org/0532gcg76","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210161647"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Daniel J. Klein","raw_affiliation_strings":["Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America"],"raw_orcid":"https://orcid.org/0000-0003-0437-7916","affiliations":[{"raw_affiliation_string":"Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America","institution_ids":["https://openalex.org/I1303444417","https://openalex.org/I4210161647"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":26,"corresponding_author_ids":["https://openalex.org/A5003824090","https://openalex.org/A5011784327","https://openalex.org/A5016823484","https://openalex.org/A5023179056","https://openalex.org/A5023757258","https://openalex.org/A5028482299","https://openalex.org/A5029040277","https://openalex.org/A5030642208","https://openalex.org/A5036326609","https://openalex.org/A5042672436","https://openalex.org/A5044387851","https://openalex.org/A5045800773","https://openalex.org/A5048557224","https://openalex.org/A5058656801","https://openalex.org/A5063042519","https://openalex.org/A5065405992","https://openalex.org/A5070600716","https://openalex.org/A5077250057","https://openalex.org/A5079223383","https://openalex.org/A5080736326","https://openalex.org/A5082963347","https://openalex.org/A5086508834","https://openalex.org/A5089906522","https://openalex.org/A5090284787","https://openalex.org/A5101849376","https://openalex.org/A5108192522"],"corresponding_institution_ids":["https://openalex.org/I124055696","https://openalex.org/I1303444417","https://openalex.org/I145902186","https://openalex.org/I2802952180","https://openalex.org/I40120149","https://openalex.org/I4210161647"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2131,"currency":"EUR","value_usd":2298},"fwci":46.6283,"has_fulltext":true,"cited_by_count":649,"citation_normalized_percentile":{"value":0.99969148,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"17","issue":"7","first_page":"e1009149","last_page":"e1009149"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10410","display_name":"COVID-19 epidemiological studies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/2611","display_name":"Modeling and Simulation"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10410","display_name":"COVID-19 epidemiological studies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/2611","display_name":"Modeling and Simulation"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11711","display_name":"COVID-19 Pandemic Impacts","score":0.9628000259399414,"subfield":{"id":"https://openalex.org/subfields/2002","display_name":"Economics and Econometrics"},"field":{"id":"https://openalex.org/fields/20","display_name":"Economics, Econometrics and Finance"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T11581","display_name":"Viral Infections and Outbreaks Research","score":0.9399999976158142,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/coronavirus-disease-2019","display_name":"Coronavirus disease 2019 (COVID-19)","score":0.6972259283065796},{"id":"https://openalex.org/keywords/dynamics","display_name":"Dynamics (music)","score":0.5784672498703003},{"id":"https://openalex.org/keywords/2019-20-coronavirus-outbreak","display_name":"2019-20 coronavirus outbreak","score":0.5658451318740845},{"id":"https://openalex.org/keywords/severe-acute-respiratory-syndrome-coronavirus-2","display_name":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)","score":0.5582094192504883},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4580937325954437},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.344539076089859},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.2634466886520386},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.24261373281478882},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2231467068195343},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.1639133095741272},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.09781792759895325},{"id":"https://openalex.org/keywords/infectious-disease","display_name":"Infectious disease (medical specialty)","score":0.06456932425498962}],"concepts":[{"id":"https://openalex.org/C3008058167","wikidata":"https://www.wikidata.org/wiki/Q84263196","display_name":"Coronavirus disease 2019 (COVID-19)","level":4,"score":0.6972259283065796},{"id":"https://openalex.org/C145912823","wikidata":"https://www.wikidata.org/wiki/Q113558","display_name":"Dynamics (music)","level":2,"score":0.5784672498703003},{"id":"https://openalex.org/C3006700255","wikidata":"https://www.wikidata.org/wiki/Q81068910","display_name":"2019-20 coronavirus outbreak","level":3,"score":0.5658451318740845},{"id":"https://openalex.org/C3007834351","wikidata":"https://www.wikidata.org/wiki/Q82069695","display_name":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)","level":5,"score":0.5582094192504883},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4580937325954437},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.344539076089859},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.2634466886520386},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.24261373281478882},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2231467068195343},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.1639133095741272},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.09781792759895325},{"id":"https://openalex.org/C524204448","wikidata":"https://www.wikidata.org/wiki/Q788926","display_name":"Infectious disease (medical specialty)","level":3,"score":0.06456932425498962},{"id":"https://openalex.org/C116675565","wikidata":"https://www.wikidata.org/wiki/Q3241045","display_name":"Outbreak","level":2,"score":0.0},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.0},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000076662","descriptor_name":"Host Microbial Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000076662","descriptor_name":"Host Microbial Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000076662","descriptor_name":"Host Microbial Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000085762","descriptor_name":"Physical Distancing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000085762","descriptor_name":"Physical Distancing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000085762","descriptor_name":"Physical Distancing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000209","qualifier_name":"etiology","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000209","qualifier_name":"etiology","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000209","qualifier_name":"etiology","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000635","qualifier_name":"transmission","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000635","qualifier_name":"transmission","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000635","qualifier_name":"transmission","is_major_topic":true},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000086663","descriptor_name":"COVID-19 Vaccines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000086663","descriptor_name":"COVID-19 Vaccines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000086663","descriptor_name":"COVID-19 Vaccines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000086742","descriptor_name":"COVID-19 Testing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000086742","descriptor_name":"COVID-19 Testing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000086742","descriptor_name":"COVID-19 Testing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006235","descriptor_name":"Hand Disinfection","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006235","descriptor_name":"Hand Disinfection","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006235","descriptor_name":"Hand Disinfection","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008397","descriptor_name":"Masks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008397","descriptor_name":"Masks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008397","descriptor_name":"Masks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011790","descriptor_name":"Quarantine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011790","descriptor_name":"Quarantine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011790","descriptor_name":"Quarantine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013597","descriptor_name":"Systems Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013597","descriptor_name":"Systems Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013597","descriptor_name":"Systems Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016358","descriptor_name":"Contact Tracing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016358","descriptor_name":"Contact Tracing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016358","descriptor_name":"Contact Tracing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018450","descriptor_name":"Disease Progression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018450","descriptor_name":"Disease Progression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018450","descriptor_name":"Disease Progression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D050936","descriptor_name":"Basic Reproduction Number","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D050936","descriptor_name":"Basic Reproduction Number","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D050936","descriptor_name":"Basic Reproduction Number","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055641","descriptor_name":"Mathematical Concepts","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055641","descriptor_name":"Mathematical Concepts","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055641","descriptor_name":"Mathematical Concepts","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058873","descriptor_name":"Pandemics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058873","descriptor_name":"Pandemics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058873","descriptor_name":"Pandemics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1371/journal.pcbi.1009149","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1009149","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:34310589","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34310589","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:doaj.org/article:578afb778b5440bd928c428097f61882","is_oa":true,"landing_page_url":"https://doaj.org/article/578afb778b5440bd928c428097f61882","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 17, Iss 7, p e1009149 (2021)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:8341708","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8341708","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"},{"id":"pmh:oai:pure.atira.dk:openaire_cris_publications/3ff9cd27-6c23-4d09-94c4-4e3220c0d7db","is_oa":true,"landing_page_url":"https://researchprofiles.ku.dk/da/publications/3ff9cd27-6c23-4d09-94c4-4e3220c0d7db","pdf_url":null,"source":{"id":"https://openalex.org/S4306401983","display_name":"Research at the University of Copenhagen (University of Copenhagen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I124055696","host_organization_name":"University of Copenhagen","host_organization_lineage":["https://openalex.org/I124055696"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Kerr , C C , Stuart , R M , Mistry , D , Abeysuriya , R G , Rosenfeld , K , Hart , G R , N\u00fa\u00f1ez , R C , Cohen , J A , Selvaraj , P , Hagedorn , B , George , L , Jastrz\u0229bski , M , Izzo , A S , Fowler , G , Palmer , A , Delport , D , Scott , N , Kelly , S L , Bennette , C S , Wagner , B G , Chang , S T , Oron , A P , Wenger , E A , Panovska-Griffiths , J , Famulare , M & Klein , D J 2021 , ' Covasim : An agent-based model of COVID-19 dynamics and interventions ' , PLOS Computational Biology , vol. 17 , no. 7 , e1009149 . https://doi.org/10.1371/journal.pcbi.1009149","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1009149","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1009149","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.6600000262260437,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320306137","display_name":"Bill and Melinda Gates Foundation","ror":"https://ror.org/0456r8d26"},{"id":"https://openalex.org/F4320310619","display_name":"Burnet Institute","ror":"https://ror.org/05ktbsm52"},{"id":"https://openalex.org/F4320314063","display_name":"QIMR Berghofer Medical Research Institute","ror":"https://ror.org/004y8wk30"},{"id":"https://openalex.org/F4320324956","display_name":"University of South Africa","ror":"https://ror.org/048cwvf49"},{"id":"https://openalex.org/F4320325636","display_name":"Jomo Kenyatta University of Agriculture and Technology","ror":"https://ror.org/015h5sy57"},{"id":"https://openalex.org/F4320332375","display_name":"Jet Propulsion Laboratory","ror":"https://ror.org/027k65916"},{"id":"https://openalex.org/F4320332603","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":115,"referenced_works":["https://openalex.org/W1964728418","https://openalex.org/W1967579272","https://openalex.org/W2032616735","https://openalex.org/W2037662824","https://openalex.org/W2044351514","https://openalex.org/W2078784586","https://openalex.org/W2084298248","https://openalex.org/W2084485640","https://openalex.org/W2126481040","https://openalex.org/W2159301256","https://openalex.org/W2217089512","https://openalex.org/W2277953252","https://openalex.org/W2601351842","https://openalex.org/W2755849266","https://openalex.org/W2792508874","https://openalex.org/W2911884711","https://openalex.org/W2949631852","https://openalex.org/W2949676527","https://openalex.org/W2971276692","https://openalex.org/W2998840182","https://openalex.org/W3003257820","https://openalex.org/W3005079553","https://openalex.org/W3005827208","https://openalex.org/W3006065484","https://openalex.org/W3006961006","https://openalex.org/W3008003211","https://openalex.org/W3008294222","https://openalex.org/W3008443627","https://openalex.org/W3009155534","https://openalex.org/W3009978661","https://openalex.org/W3009983851","https://openalex.org/W3010233963","https://openalex.org/W3011660668","https://openalex.org/W3011945457","https://openalex.org/W3012364352","https://openalex.org/W3012756997","https://openalex.org/W3012916185","https://openalex.org/W3013215798","https://openalex.org/W3013653866","https://openalex.org/W3013893137","https://openalex.org/W3013967887","https://openalex.org/W3015538318","https://openalex.org/W3015571324","https://openalex.org/W3015784927","https://openalex.org/W3016783820","https://openalex.org/W3018782651","https://openalex.org/W3020184843","https://openalex.org/W3021923959","https://openalex.org/W3022405684","https://openalex.org/W3023190093","https://openalex.org/W3023441241","https://openalex.org/W3025512159","https://openalex.org/W3035693076","https://openalex.org/W3035706118","https://openalex.org/W3035717157","https://openalex.org/W3036030877","https://openalex.org/W3036348626","https://openalex.org/W3042091277","https://openalex.org/W3042453924","https://openalex.org/W3043699273","https://openalex.org/W3046551854","https://openalex.org/W3047132168","https://openalex.org/W3048645635","https://openalex.org/W3055859021","https://openalex.org/W3080376427","https://openalex.org/W3081197604","https://openalex.org/W3082128397","https://openalex.org/W3082543997","https://openalex.org/W3082962391","https://openalex.org/W3083477049","https://openalex.org/W3084123562","https://openalex.org/W3086555177","https://openalex.org/W3087049973","https://openalex.org/W3093610264","https://openalex.org/W3094615716","https://openalex.org/W3094870193","https://openalex.org/W3095279356","https://openalex.org/W3095683209","https://openalex.org/W3096084589","https://openalex.org/W3099011804","https://openalex.org/W3103145119","https://openalex.org/W3104457017","https://openalex.org/W3105183509","https://openalex.org/W3106040718","https://openalex.org/W3107533241","https://openalex.org/W3108734485","https://openalex.org/W3111599922","https://openalex.org/W3111883190","https://openalex.org/W3111885034","https://openalex.org/W3117947765","https://openalex.org/W3118577024","https://openalex.org/W3119774682","https://openalex.org/W3119859287","https://openalex.org/W3121506861","https://openalex.org/W3124727177","https://openalex.org/W3130217927","https://openalex.org/W3134152404","https://openalex.org/W3135775832","https://openalex.org/W3153329099","https://openalex.org/W3155376253","https://openalex.org/W3162802638","https://openalex.org/W3165423827","https://openalex.org/W3165656738","https://openalex.org/W3174441576","https://openalex.org/W3181360113","https://openalex.org/W3196867394","https://openalex.org/W3203783182","https://openalex.org/W4205849008","https://openalex.org/W4221044516","https://openalex.org/W4236624053","https://openalex.org/W6749412206","https://openalex.org/W6758555178","https://openalex.org/W6780745189","https://openalex.org/W6782096947","https://openalex.org/W7075724375"],"related_works":["https://openalex.org/W3036314732","https://openalex.org/W3009669391","https://openalex.org/W3176864053","https://openalex.org/W3171943759","https://openalex.org/W4292098121","https://openalex.org/W3154141118","https://openalex.org/W4388896133","https://openalex.org/W3031607536","https://openalex.org/W4224279380","https://openalex.org/W4205317059"],"abstract_inverted_index":{"The":[0],"COVID-19":[1],"pandemic":[2],"has":[3,132,170],"created":[4],"an":[5,32,81],"urgent":[6],"need":[7],"for":[8],"models":[9],"that":[10],"can":[11,116,150],"project":[12],"epidemic":[13,176],"trends,":[14],"explore":[15],"intervention":[16],"scenarios,":[17],"and":[18,49,66,71,93,100,106,112,124,143,146,167,178,192],"estimate":[19],"resource":[20],"needs.":[21],"Here":[22],"we":[23],"describe":[24],"the":[25,118],"methodology":[26],"of":[27,84,120,141],"Covasim":[28,41,78,131,169],"(COVID-19":[29],"Agent-based":[30],"Simulator),":[31],"open-source":[33],"model":[34],"developed":[35],"to":[36,174],"help":[37],"address":[38],"these":[39],"questions.":[40],"includes":[42],"country-specific":[43],"demographic":[44],"information":[45],"on":[46,138,153],"age":[47],"structure":[48],"population":[50],"size;":[51],"realistic":[52,145],"transmission":[53],"networks":[54],"in":[55,128,157,182,188],"different":[56],"social":[57],"layers,":[58],"including":[59,75,86,98],"households,":[60],"schools,":[61],"workplaces,":[62],"long-term":[63],"care":[64],"facilities,":[65],"communities;":[67],"age-specific":[68],"disease":[69],"outcomes;":[70],"intrahost":[72],"viral":[73],"dynamics,":[74],"viral-load-based":[76],"transmissibility.":[77],"also":[79],"supports":[80],"extensive":[82],"set":[83],"interventions,":[85,88,97,102],"non-pharmaceutical":[87],"such":[89,103],"as":[90,104],"physical":[91],"distancing":[92],"protective":[94],"equipment;":[95],"pharmaceutical":[96],"vaccination;":[99],"testing":[101],"symptomatic":[105],"asymptomatic":[107],"testing,":[108],"isolation,":[109],"contact":[110],"tracing,":[111],"quarantine.":[113],"These":[114],"interventions":[115],"incorporate":[117],"effects":[119],"delays,":[121],"loss-to-follow-up,":[122],"micro-targeting,":[123],"other":[125],"factors.":[126],"Implemented":[127],"pure":[129],"Python,":[130],"been":[133,172],"designed":[134],"with":[135,163],"equal":[136],"emphasis":[137],"performance,":[139],"ease":[140],"use,":[142],"flexibility:":[144],"highly":[147],"customized":[148],"scenarios":[149],"be":[151],"run":[152],"a":[154,159,185],"standard":[155],"laptop":[156],"under":[158],"minute.":[160],"In":[161],"collaboration":[162],"local":[164],"health":[165],"agencies":[166],"policymakers,":[168],"already":[171],"applied":[173],"examine":[175],"dynamics":[177],"inform":[179],"policy":[180],"decisions":[181],"more":[183],"than":[184],"dozen":[186],"countries":[187],"Africa,":[189],"Asia-Pacific,":[190],"Europe,":[191],"North":[193],"America.":[194]},"counts_by_year":[{"year":2026,"cited_by_count":30},{"year":2025,"cited_by_count":97},{"year":2024,"cited_by_count":139},{"year":2023,"cited_by_count":136},{"year":2022,"cited_by_count":149},{"year":2021,"cited_by_count":87},{"year":2020,"cited_by_count":11}],"updated_date":"2026-06-12T08:23:45.883708","created_date":"2025-10-10T00:00:00"}
