{"id":"https://openalex.org/W34003867","doi":"https://doi.org/10.1371/journal.pcbi.1008999","title":"\u041c\u0438\u0433\u0440\u0430\u0446\u0438\u044f \u0438\u0437 \u0410\u0432\u0441\u0442\u0440\u043e-\u0412\u0435\u043d\u0433\u0440\u0438\u0438 \u0432 \u0411\u043e\u043b\u0433\u0430\u0440\u0438\u044e \u0432 \u043a\u043e\u043d\u0446\u0435 XIX \u2013 \u043d\u0430\u0447\u0430\u043b\u0435 XX \u0432. \u041f\u043e \u0434\u0430\u043d\u043d\u044b\u043c \u043f\u0435\u0440\u0435\u043f\u0438\u0441\u0435\u0439 \u043d\u0430\u0441\u0435\u043b\u0435\u043d\u0438\u044f \u0411\u043e\u043b\u0433\u0430\u0440\u0438\u0438","display_name":"\u041c\u0438\u0433\u0440\u0430\u0446\u0438\u044f \u0438\u0437 \u0410\u0432\u0441\u0442\u0440\u043e-\u0412\u0435\u043d\u0433\u0440\u0438\u0438 \u0432 \u0411\u043e\u043b\u0433\u0430\u0440\u0438\u044e \u0432 \u043a\u043e\u043d\u0446\u0435 XIX \u2013 \u043d\u0430\u0447\u0430\u043b\u0435 XX \u0432. \u041f\u043e \u0434\u0430\u043d\u043d\u044b\u043c \u043f\u0435\u0440\u0435\u043f\u0438\u0441\u0435\u0439 \u043d\u0430\u0441\u0435\u043b\u0435\u043d\u0438\u044f \u0411\u043e\u043b\u0433\u0430\u0440\u0438\u0438","publication_year":2010,"publication_date":"2010-01-01","ids":{"openalex":"https://openalex.org/W34003867","doi":"https://doi.org/10.1371/journal.pcbi.1008999","mag":"34003867"},"language":"en","primary_location":{"id":"mag:34003867","is_oa":true,"landing_page_url":"https://elar.urfu.ru/bitstream/10995/4942/2/im-03-7-2010.pdf","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},"type":"article","indexed_in":[],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://elar.urfu.ru/bitstream/10995/4942/2/im-03-7-2010.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5005818165","display_name":"\u041f. \u041f\u0435\u0439\u043a\u043e\u0432\u0441\u043a\u0430","orcid":null},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"\u041f. \u041f\u0435\u0439\u043a\u043e\u0432\u0441\u043a\u0430","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":["https://openalex.org/A5005818165"],"corresponding_institution_ids":[],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.00505102,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"17","issue":"5","first_page":"e1008999","last_page":"e1008999"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.3495999872684479,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.3495999872684479,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.17499999701976776,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.07890000194311142,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/philosophy","display_name":"Philosophy","score":0.32007890939712524}],"concepts":[{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.32007890939712524}],"mesh":[],"locations_count":3,"locations":[{"id":"mag:34003867","is_oa":true,"landing_page_url":"https://elar.urfu.ru/bitstream/10995/4942/2/im-03-7-2010.pdf","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:elar.urfu.ru:10995/4942","is_oa":false,"landing_page_url":"http://elar.urfu.ru/handle/10995/4942","pdf_url":null,"source":{"id":"https://openalex.org/S4406922546","display_name":"Electronic Archive of Ural Federal University (ELAR UrFU)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:jah.su:record/4084","is_oa":true,"landing_page_url":"http://hdl.handle.net/10995/4942","pdf_url":"http://hdl.handle.net/10995/4942","source":{"id":"https://openalex.org/S4306401523","display_name":"Electronic scientific archive of UrFU (Ural Federal University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I130823665","host_organization_name":"Ural Federal University","host_organization_lineage":["https://openalex.org/I130823665"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"mag:34003867","is_oa":true,"landing_page_url":"https://elar.urfu.ru/bitstream/10995/4942/2/im-03-7-2010.pdf","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},"sustainable_development_goals":[{"score":0.6700000166893005,"display_name":"Reduced inequalities","id":"https://metadata.un.org/sdg/10"}],"awards":[{"id":"https://openalex.org/G13765970","display_name":null,"funder_award_id":"DP2 OD024541-01","funder_id":"https://openalex.org/F4320337349","funder_display_name":"NIH Office of the Director"},{"id":"https://openalex.org/G6063616604","display_name":null,"funder_award_id":"DP2 HD094655","funder_id":"https://openalex.org/F4320337611","funder_display_name":"Eunice Kennedy Shriver National Institute of Child Health and Human Development"}],"funders":[{"id":"https://openalex.org/F4320306133","display_name":"Burroughs Wellcome Fund","ror":"https://ror.org/01d35cw23"},{"id":"https://openalex.org/F4320306151","display_name":"Alfred P. Sloan Foundation","ror":"https://ror.org/052csg198"},{"id":"https://openalex.org/F4320311953","display_name":"Shurl and Kay Curci Foundation","ror":"https://ror.org/05t9fgt79"},{"id":"https://openalex.org/F4320311968","display_name":"Hellman Foundation","ror":"https://ror.org/02g98ya79"},{"id":"https://openalex.org/F4320314849","display_name":"Searle Scholars Program","ror":null},{"id":"https://openalex.org/F4320324571","display_name":"Korea Foundation for Advanced Studies","ror":"https://ror.org/0556dev32"},{"id":"https://openalex.org/F4320333566","display_name":"National Defense Science and Engineering Graduate","ror":null},{"id":"https://openalex.org/F4320337349","display_name":"NIH Office of the Director","ror":"https://ror.org/00fj8a872"},{"id":"https://openalex.org/F4320337611","display_name":"Eunice Kennedy Shriver National Institute of Child Health and Human Development","ror":"https://ror.org/04byxyr05"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":[],"abstract_inverted_index":{"The":[0],"eukaryotic":[1],"transcription":[2,75,182],"cycle":[3,76,183],"consists":[4],"of":[5,13,20,54,63,73,134,144,180],"three":[6],"main":[7],"steps:":[8],"initiation,":[9],"elongation,":[10],"and":[11,80,91,157],"cleavage":[12,160],"the":[14,50,70,74,82,92,131,142,172,181],"nascent":[15,158],"RNA":[16,136,154,159],"transcript.":[17],"Although":[18],"each":[19,31,53,178],"these":[21,55,118],"steps":[22],"can":[23],"be":[24],"regulated":[25],"as":[26,28,97,112,114],"well":[27,113],"coupled":[29],"with":[30,123],"other,":[32],"their":[33],"in":[34,77,109,130,175,184],"vivo":[35],"dissection":[36],"has":[37],"remained":[38],"challenging":[39],"because":[40],"available":[41],"experimental":[42],"readouts":[43],"lack":[44],"sufficient":[45],"spatiotemporal":[46,190],"resolution":[47],"to":[48,67,168],"separate":[49],"contributions":[51],"from":[52],"steps.":[56],"Here,":[57],"we":[58],"describe":[59],"a":[60,86,98,127,149],"novel":[61,150],"application":[62],"Bayesian":[64],"inference":[65],"techniques":[66],"simultaneously":[68],"infer":[69],"effective":[71],"parameters":[72,111],"real":[78],"time":[79],"at":[81,188],"single-cell":[83,115],"level":[84],"using":[85],"two-color":[87],"MS2/PP7":[88],"reporter":[89],"gene":[90],"developing":[93],"fruit":[94],"fly":[95],"embryo":[96],"case":[99],"study.":[100],"Our":[101],"method":[102],"enables":[103],"detailed":[104],"investigations":[105],"into":[106],"cell-to-cell":[107],"variability":[108,129],"transcription-cycle":[110],"correlations":[116],"between":[117,153],"parameters.":[119],"These":[120],"measurements,":[121],"combined":[122],"theoretical":[124],"modeling,":[125],"suggest":[126],"substantial":[128],"elongation":[132],"rate":[133],"individual":[135],"polymerase":[137,155],"molecules.":[138],"We":[139],"further":[140],"illustrate":[141],"power":[143],"this":[145],"technique":[146],"by":[147],"uncovering":[148],"mechanistic":[151],"connection":[152],"density":[156],"efficiency.":[161],"Thus,":[162],"our":[163],"approach":[164],"makes":[165],"it":[166],"possible":[167],"shed":[169],"light":[170],"on":[171],"regulatory":[173],"mechanisms":[174],"play":[176],"during":[177],"step":[179],"individual,":[185],"living":[186],"cells":[187],"high":[189],"resolution.":[191]},"counts_by_year":[],"updated_date":"2025-10-10T17:16:08.811792","created_date":"2025-10-10T00:00:00"}
