{"id":"https://openalex.org/W3152838493","doi":"https://doi.org/10.1371/journal.pcbi.1008806","title":"VolPy: Automated and scalable analysis pipelines for voltage imaging datasets","display_name":"VolPy: Automated and scalable analysis pipelines for voltage imaging datasets","publication_year":2021,"publication_date":"2021-04-14","ids":{"openalex":"https://openalex.org/W3152838493","doi":"https://doi.org/10.1371/journal.pcbi.1008806","mag":"3152838493","pmid":"https://pubmed.ncbi.nlm.nih.gov/33852574"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1008806","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1008806","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1371/journal.pcbi.1008806","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5080148959","display_name":"Changjia Cai","orcid":"https://orcid.org/0000-0002-1091-5365"},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]},{"id":"https://openalex.org/I137902535","display_name":"North Carolina State University","ror":"https://ror.org/04tj63d06","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Changjia Cai","raw_affiliation_strings":["Joint Department of Biomedical Engineering at University of North Carolina at Chapel Hill and North Carolina State University, Chapel Hill, North Carolina, United States of America"],"raw_orcid":"https://orcid.org/0000-0002-1091-5365","affiliations":[{"raw_affiliation_string":"Joint Department of Biomedical Engineering at University of North Carolina at Chapel Hill and North Carolina State University, Chapel Hill, North Carolina, United States of America","institution_ids":["https://openalex.org/I114027177","https://openalex.org/I137902535"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088167504","display_name":"Johannes Friedrich","orcid":"https://orcid.org/0000-0002-1321-5866"},"institutions":[{"id":"https://openalex.org/I4210107338","display_name":"Simons Foundation","ror":"https://ror.org/01cmst727","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210107338"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Johannes Friedrich","raw_affiliation_strings":["Flatiron Institute, Simons Foundation, New York, New York, United States of America"],"raw_orcid":"https://orcid.org/0000-0002-1321-5866","affiliations":[{"raw_affiliation_string":"Flatiron Institute, Simons Foundation, New York, New York, United States of America","institution_ids":["https://openalex.org/I4210107338"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101740807","display_name":"Amrita Singh","orcid":"https://orcid.org/0000-0002-6413-2040"},"institutions":[{"id":"https://openalex.org/I1344073410","display_name":"Howard Hughes Medical Institute","ror":"https://ror.org/006w34k90","country_code":"US","type":"facility","lineage":["https://openalex.org/I1344073410"]},{"id":"https://openalex.org/I195573530","display_name":"Janelia Research Campus","ror":"https://ror.org/013sk6x84","country_code":"US","type":"facility","lineage":["https://openalex.org/I1344073410","https://openalex.org/I195573530"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Amrita Singh","raw_affiliation_strings":["Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, Virginia, United States of America"],"raw_orcid":"https://orcid.org/0000-0002-6413-2040","affiliations":[{"raw_affiliation_string":"Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, Virginia, United States of America","institution_ids":["https://openalex.org/I195573530","https://openalex.org/I1344073410"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051934901","display_name":"M. Hossein Eybposh","orcid":"https://orcid.org/0000-0002-3934-1609"},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]},{"id":"https://openalex.org/I137902535","display_name":"North Carolina State University","ror":"https://ror.org/04tj63d06","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"M. Hossein Eybposh","raw_affiliation_strings":["Joint Department of Biomedical Engineering at University of North Carolina at Chapel Hill and North Carolina State University, Chapel Hill, North Carolina, United States of America"],"raw_orcid":"https://orcid.org/0000-0002-3934-1609","affiliations":[{"raw_affiliation_string":"Joint Department of Biomedical Engineering at University of North Carolina at Chapel Hill and North Carolina State University, Chapel Hill, North Carolina, United States of America","institution_ids":["https://openalex.org/I114027177","https://openalex.org/I137902535"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054955073","display_name":"Eftychios A. Pnevmatikakis","orcid":"https://orcid.org/0000-0003-1509-6394"},"institutions":[{"id":"https://openalex.org/I4210107338","display_name":"Simons Foundation","ror":"https://ror.org/01cmst727","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210107338"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Eftychios A. Pnevmatikakis","raw_affiliation_strings":["Flatiron Institute, Simons Foundation, New York, New York, United States of America"],"raw_orcid":"https://orcid.org/0000-0003-1509-6394","affiliations":[{"raw_affiliation_string":"Flatiron Institute, Simons Foundation, New York, New York, United States of America","institution_ids":["https://openalex.org/I4210107338"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047211354","display_name":"Kaspar Podgorski","orcid":"https://orcid.org/0000-0002-0374-2005"},"institutions":[{"id":"https://openalex.org/I1344073410","display_name":"Howard Hughes Medical Institute","ror":"https://ror.org/006w34k90","country_code":"US","type":"facility","lineage":["https://openalex.org/I1344073410"]},{"id":"https://openalex.org/I195573530","display_name":"Janelia Research Campus","ror":"https://ror.org/013sk6x84","country_code":"US","type":"facility","lineage":["https://openalex.org/I1344073410","https://openalex.org/I195573530"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Kaspar Podgorski","raw_affiliation_strings":["Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, Virginia, United States of America"],"raw_orcid":"https://orcid.org/0000-0002-0374-2005","affiliations":[{"raw_affiliation_string":"Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, Virginia, United States of America","institution_ids":["https://openalex.org/I195573530","https://openalex.org/I1344073410"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5054296113","display_name":"Andrea Giovannucci","orcid":"https://orcid.org/0000-0002-7850-444X"},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]},{"id":"https://openalex.org/I137902535","display_name":"North Carolina State University","ror":"https://ror.org/04tj63d06","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Andrea Giovannucci","raw_affiliation_strings":["Joint Department of Biomedical Engineering at University of North Carolina at Chapel Hill and North Carolina State University, Chapel Hill, North Carolina, United States of America","Neuroscience Center, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America"],"raw_orcid":"https://orcid.org/0000-0002-7850-444X","affiliations":[{"raw_affiliation_string":"Joint Department of Biomedical Engineering at University of North Carolina at Chapel Hill and North Carolina State University, Chapel Hill, North Carolina, United States of America","institution_ids":["https://openalex.org/I114027177","https://openalex.org/I137902535"]},{"raw_affiliation_string":"Neuroscience Center, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America","institution_ids":["https://openalex.org/I114027177"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5047211354","https://openalex.org/A5051934901","https://openalex.org/A5054296113","https://openalex.org/A5054955073","https://openalex.org/A5080148959","https://openalex.org/A5088167504","https://openalex.org/A5101740807"],"corresponding_institution_ids":["https://openalex.org/I114027177","https://openalex.org/I1344073410","https://openalex.org/I137902535","https://openalex.org/I195573530","https://openalex.org/I4210107338"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":3.6613,"has_fulltext":false,"cited_by_count":54,"citation_normalized_percentile":{"value":0.93563082,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":97,"max":100},"biblio":{"volume":"17","issue":"4","first_page":"e1008806","last_page":"e1008806"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11343","display_name":"Power Transformer Diagnostics and Insulation","score":0.9886000156402588,"subfield":{"id":"https://openalex.org/subfields/2208","display_name":"Electrical and Electronic Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11343","display_name":"Power Transformer Diagnostics and Insulation","score":0.9886000156402588,"subfield":{"id":"https://openalex.org/subfields/2208","display_name":"Electrical and Electronic Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10320","display_name":"Neural Networks and Applications","score":0.9807000160217285,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13650","display_name":"Computational Physics and Python Applications","score":0.9761000275611877,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/pipeline-transport","display_name":"Pipeline transport","score":0.6422744989395142},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5350967645645142},{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.5172005891799927},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.38793373107910156},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.348967045545578},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.2019982635974884},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.18008556962013245},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.10805889964103699},{"id":"https://openalex.org/keywords/mechanical-engineering","display_name":"Mechanical engineering","score":0.06761518120765686}],"concepts":[{"id":"https://openalex.org/C175309249","wikidata":"https://www.wikidata.org/wiki/Q725864","display_name":"Pipeline transport","level":2,"score":0.6422744989395142},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5350967645645142},{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.5172005891799927},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.38793373107910156},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.348967045545578},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.2019982635974884},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.18008556962013245},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.10805889964103699},{"id":"https://openalex.org/C78519656","wikidata":"https://www.wikidata.org/wiki/Q101333","display_name":"Mechanical engineering","level":1,"score":0.06761518120765686}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001331","descriptor_name":"Automation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001331","descriptor_name":"Automation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001331","descriptor_name":"Automation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055724","descriptor_name":"Electrophysiological Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055724","descriptor_name":"Electrophysiological Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055724","descriptor_name":"Electrophysiological Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059906","descriptor_name":"Neuroimaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059906","descriptor_name":"Neuroimaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059906","descriptor_name":"Neuroimaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1371/journal.pcbi.1008806","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1008806","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:33852574","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33852574","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:RePEc:plo:pcbi00:1008806","is_oa":false,"landing_page_url":"https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1008806","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},{"id":"pmh:oai:doaj.org/article:3b0eff8c33ef4d05b4a80f68b3794f69","is_oa":true,"landing_page_url":"https://doaj.org/article/3b0eff8c33ef4d05b4a80f68b3794f69","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 17, Iss 4, p e1008806 (2021)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:8075204","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8075204","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1008806","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1008806","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320306082","display_name":"Howard Hughes Medical Institute","ror":"https://ror.org/006w34k90"},{"id":"https://openalex.org/F4320306253","display_name":"Arnold and Mabel Beckman Foundation","ror":"https://ror.org/05avmtm72"},{"id":"https://openalex.org/F4320306399","display_name":"Kavli Foundation","ror":"https://ror.org/00kztt736"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":41,"referenced_works":["https://openalex.org/W1686810756","https://openalex.org/W1861492603","https://openalex.org/W1963989925","https://openalex.org/W1995360097","https://openalex.org/W2039190622","https://openalex.org/W2062619493","https://openalex.org/W2097117768","https://openalex.org/W2097897435","https://openalex.org/W2118465022","https://openalex.org/W2133701212","https://openalex.org/W2164507911","https://openalex.org/W2194775991","https://openalex.org/W2222512263","https://openalex.org/W2231009150","https://openalex.org/W2469581795","https://openalex.org/W2469594461","https://openalex.org/W2559254550","https://openalex.org/W2565639579","https://openalex.org/W2753811918","https://openalex.org/W2792403811","https://openalex.org/W2805271873","https://openalex.org/W2805989827","https://openalex.org/W2887789520","https://openalex.org/W2899201459","https://openalex.org/W2900936384","https://openalex.org/W2936929958","https://openalex.org/W2940746893","https://openalex.org/W2943665347","https://openalex.org/W2950205567","https://openalex.org/W2951253601","https://openalex.org/W2953054979","https://openalex.org/W2963150697","https://openalex.org/W2963717178","https://openalex.org/W2964363746","https://openalex.org/W2979747856","https://openalex.org/W2988532209","https://openalex.org/W2996784223","https://openalex.org/W3002814515","https://openalex.org/W3093462071","https://openalex.org/W3152344832","https://openalex.org/W3152838493"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W2389214306"],"abstract_inverted_index":{"Voltage":[0],"imaging":[1,52],"enables":[2],"monitoring":[3],"neural":[4],"activity":[5],"at":[6],"sub-millisecond":[7],"and":[8,18,30,46,63,73,79,99,110,113,133],"sub-cellular":[9],"scale,":[10],"unlocking":[11],"the":[12],"study":[13],"of":[14,89],"subthreshold":[15],"activity,":[16],"synchrony,":[17],"network":[19],"dynamics":[20],"with":[21,118],"unprecedented":[22],"spatio-temporal":[23],"resolution.":[24],"However,":[25],"high":[26],"data":[27],"rates":[28],"(>800MB/s)":[29],"low":[31],"signal-to-noise":[32],"ratios":[33],"create":[34],"bottlenecks":[35],"for":[36,77],"analyzing":[37],"such":[38],"datasets.":[39,53],"Here":[40],"we":[41,85,114],"present":[42],"VolPy,":[43],"an":[44],"automated":[45,60,83],"scalable":[47],"pipeline":[48],"to":[49],"pre-process":[50],"voltage":[51,100],"VolPy":[54,104],"features":[55],"motion":[56],"correction,":[57],"memory":[58,78],"mapping,":[59],"segmentation,":[61,84,108],"denoising":[62],"spike":[64,131],"extraction,":[65],"all":[66],"built":[67],"on":[68],"a":[69,87],"highly":[70],"parallelizable,":[71],"modular,":[72],"extensible":[74],"framework":[75],"optimized":[76],"speed.":[80],"To":[81],"aid":[82],"introduce":[86],"corpus":[88],"24":[90],"manually":[91],"annotated":[92],"datasets":[93],"from":[94],"different":[95],"preparations,":[96],"brain":[97],"areas":[98],"indicators.":[101],"We":[102],"benchmark":[103],"against":[105],"ground":[106],"truth":[107],"simulations":[109],"electrophysiology":[111],"recordings,":[112],"compare":[115],"its":[116],"performance":[117,129],"existing":[119],"algorithms":[120],"in":[121,130],"detecting":[122],"spikes.":[123],"Our":[124],"results":[125],"indicate":[126],"that":[127],"VolPy's":[128],"extraction":[132],"scalability":[134],"are":[135],"state-of-the-art.":[136]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":15},{"year":2024,"cited_by_count":9},{"year":2023,"cited_by_count":14},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":8}],"updated_date":"2026-06-12T08:23:45.883708","created_date":"2025-10-10T00:00:00"}