{"id":"https://openalex.org/W3128054065","doi":"https://doi.org/10.1371/journal.pcbi.1008735","title":"From heterogeneous healthcare data to disease-specific biomarker networks: A hierarchical Bayesian network approach","display_name":"From heterogeneous healthcare data to disease-specific biomarker networks: A hierarchical Bayesian network approach","publication_year":2021,"publication_date":"2021-02-12","ids":{"openalex":"https://openalex.org/W3128054065","doi":"https://doi.org/10.1371/journal.pcbi.1008735","mag":"3128054065","pmid":"https://pubmed.ncbi.nlm.nih.gov/33577591"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1008735","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1008735","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1371/journal.pcbi.1008735","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5032315911","display_name":"Ann\u2010Kristin Becker","orcid":"https://orcid.org/0000-0003-1906-0583"},"institutions":[{"id":"https://openalex.org/I2799318839","display_name":"Universit\u00e4tsmedizin Greifswald","ror":"https://ror.org/025vngs54","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2799318839"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Ann-Kristin Becker","raw_affiliation_strings":["Institute of Bioinformatics, University Medicine Greifswald, Greifswald, Germany"],"raw_orcid":"https://orcid.org/0000-0003-1906-0583","affiliations":[{"raw_affiliation_string":"Institute of Bioinformatics, University Medicine Greifswald, Greifswald, Germany","institution_ids":["https://openalex.org/I2799318839"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046776695","display_name":"Marcus D\u00f6rr","orcid":"https://orcid.org/0000-0001-7471-475X"},"institutions":[{"id":"https://openalex.org/I2799318839","display_name":"Universit\u00e4tsmedizin Greifswald","ror":"https://ror.org/025vngs54","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2799318839"]},{"id":"https://openalex.org/I4210127591","display_name":"German Centre for Cardiovascular Research","ror":"https://ror.org/031t5w623","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210127591","https://openalex.org/I4405256427"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Marcus D\u00f6rr","raw_affiliation_strings":["Department of Internal Medicine B, University Medicine Greifswald, Greifswald, Germany","German Centre for Cardiovascular Research (DZHK), partner site Greifswald, Greifswald, Germany"],"raw_orcid":"https://orcid.org/0000-0001-7471-475X","affiliations":[{"raw_affiliation_string":"Department of Internal Medicine B, University Medicine Greifswald, Greifswald, Germany","institution_ids":["https://openalex.org/I2799318839"]},{"raw_affiliation_string":"German Centre for Cardiovascular Research (DZHK), partner site Greifswald, Greifswald, Germany","institution_ids":["https://openalex.org/I4210127591"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068746352","display_name":"Stephan B. Felix","orcid":"https://orcid.org/0000-0002-0744-091X"},"institutions":[{"id":"https://openalex.org/I2799318839","display_name":"Universit\u00e4tsmedizin Greifswald","ror":"https://ror.org/025vngs54","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2799318839"]},{"id":"https://openalex.org/I4210127591","display_name":"German Centre for Cardiovascular Research","ror":"https://ror.org/031t5w623","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210127591","https://openalex.org/I4405256427"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Stephan B. Felix","raw_affiliation_strings":["Department of Internal Medicine B, University Medicine Greifswald, Greifswald, Germany","German Centre for Cardiovascular Research (DZHK), partner site Greifswald, Greifswald, Germany"],"raw_orcid":"https://orcid.org/0000-0002-0744-091X","affiliations":[{"raw_affiliation_string":"Department of Internal Medicine B, University Medicine Greifswald, Greifswald, Germany","institution_ids":["https://openalex.org/I2799318839"]},{"raw_affiliation_string":"German Centre for Cardiovascular Research (DZHK), partner site Greifswald, Greifswald, Germany","institution_ids":["https://openalex.org/I4210127591"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089391172","display_name":"Fabian Frost","orcid":"https://orcid.org/0000-0002-1502-8888"},"institutions":[{"id":"https://openalex.org/I2799318839","display_name":"Universit\u00e4tsmedizin Greifswald","ror":"https://ror.org/025vngs54","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2799318839"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Fabian Frost","raw_affiliation_strings":["Department of Internal Medicine A, University Medicine Greifswald, Greifswald, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Internal Medicine A, University Medicine Greifswald, Greifswald, Germany","institution_ids":["https://openalex.org/I2799318839"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037469384","display_name":"Hans J. Grabe","orcid":"https://orcid.org/0000-0003-3684-4208"},"institutions":[{"id":"https://openalex.org/I2799318839","display_name":"Universit\u00e4tsmedizin Greifswald","ror":"https://ror.org/025vngs54","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2799318839"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Hans J. Grabe","raw_affiliation_strings":["Department of Psychiatry, University Medicine Greifswald, Greifswald, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Psychiatry, University Medicine Greifswald, Greifswald, Germany","institution_ids":["https://openalex.org/I2799318839"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101644008","display_name":"Markus M. Lerch","orcid":"https://orcid.org/0000-0002-9643-8263"},"institutions":[{"id":"https://openalex.org/I2799318839","display_name":"Universit\u00e4tsmedizin Greifswald","ror":"https://ror.org/025vngs54","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2799318839"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Markus M. Lerch","raw_affiliation_strings":["Department of Internal Medicine A, University Medicine Greifswald, Greifswald, Germany"],"raw_orcid":"https://orcid.org/0000-0002-9643-8263","affiliations":[{"raw_affiliation_string":"Department of Internal Medicine A, University Medicine Greifswald, Greifswald, Germany","institution_ids":["https://openalex.org/I2799318839"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039866909","display_name":"Matthias Nauck","orcid":"https://orcid.org/0000-0002-6678-7964"},"institutions":[{"id":"https://openalex.org/I2799318839","display_name":"Universit\u00e4tsmedizin Greifswald","ror":"https://ror.org/025vngs54","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2799318839"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Matthias Nauck","raw_affiliation_strings":["Institute of Clinical Chemistry and Laboratory Medicine, University Medicine Greifswald, Greifswald, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Clinical Chemistry and Laboratory Medicine, University Medicine Greifswald, Greifswald, Germany","institution_ids":["https://openalex.org/I2799318839"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085667735","display_name":"Uwe V\u00f6lker","orcid":"https://orcid.org/0000-0002-5689-3448"},"institutions":[{"id":"https://openalex.org/I2799318839","display_name":"Universit\u00e4tsmedizin Greifswald","ror":"https://ror.org/025vngs54","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2799318839"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Uwe V\u00f6lker","raw_affiliation_strings":["Interfaculty Institute of Genetics and Functional Genomics, Department of Functional Genomics, University Medicine Greifswald, Greifswald, Germany"],"raw_orcid":"https://orcid.org/0000-0002-5689-3448","affiliations":[{"raw_affiliation_string":"Interfaculty Institute of Genetics and Functional Genomics, Department of Functional Genomics, University Medicine Greifswald, Greifswald, Germany","institution_ids":["https://openalex.org/I2799318839"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011709769","display_name":"Henry V\u00f6lzke","orcid":"https://orcid.org/0000-0001-7003-399X"},"institutions":[{"id":"https://openalex.org/I2799318839","display_name":"Universit\u00e4tsmedizin Greifswald","ror":"https://ror.org/025vngs54","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2799318839"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Henry V\u00f6lzke","raw_affiliation_strings":["Institute of Community Medicine, SHIP/KEF, University Medicine Greifswald, Greifswald, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Community Medicine, SHIP/KEF, University Medicine Greifswald, Greifswald, Germany","institution_ids":["https://openalex.org/I2799318839"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5049849598","display_name":"Lars Kaderali","orcid":"https://orcid.org/0000-0002-2359-2294"},"institutions":[{"id":"https://openalex.org/I2799318839","display_name":"Universit\u00e4tsmedizin Greifswald","ror":"https://ror.org/025vngs54","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2799318839"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Lars Kaderali","raw_affiliation_strings":["Institute of Bioinformatics, University Medicine Greifswald, Greifswald, Germany"],"raw_orcid":"https://orcid.org/0000-0002-2359-2294","affiliations":[{"raw_affiliation_string":"Institute of Bioinformatics, University Medicine Greifswald, Greifswald, Germany","institution_ids":["https://openalex.org/I2799318839"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5049849598"],"corresponding_institution_ids":["https://openalex.org/I2799318839"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":1.6378,"has_fulltext":true,"cited_by_count":17,"citation_normalized_percentile":{"value":0.86007921,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"17","issue":"2","first_page":"e1008735","last_page":"e1008735"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11303","display_name":"Bayesian Modeling and Causal Inference","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11303","display_name":"Bayesian Modeling and Causal Inference","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9873999953269958,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10351","display_name":"Liver Disease Diagnosis and Treatment","score":0.9775000214576721,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7694010734558105},{"id":"https://openalex.org/keywords/bayesian-network","display_name":"Bayesian network","score":0.6203593015670776},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.5875146985054016},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.5653854608535767},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.535816490650177},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.535445511341095},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5005714893341064},{"id":"https://openalex.org/keywords/preprocessor","display_name":"Preprocessor","score":0.49142158031463623},{"id":"https://openalex.org/keywords/bayesian-probability","display_name":"Bayesian probability","score":0.48157596588134766},{"id":"https://openalex.org/keywords/bayes-theorem","display_name":"Bayes' theorem","score":0.4557686448097229},{"id":"https://openalex.org/keywords/heterogeneous-network","display_name":"Heterogeneous network","score":0.4464077353477478},{"id":"https://openalex.org/keywords/wireless-network","display_name":"Wireless network","score":0.12560096383094788}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7694010734558105},{"id":"https://openalex.org/C33724603","wikidata":"https://www.wikidata.org/wiki/Q812540","display_name":"Bayesian network","level":2,"score":0.6203593015670776},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.5875146985054016},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.5653854608535767},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.535816490650177},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.535445511341095},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5005714893341064},{"id":"https://openalex.org/C34736171","wikidata":"https://www.wikidata.org/wiki/Q918333","display_name":"Preprocessor","level":2,"score":0.49142158031463623},{"id":"https://openalex.org/C107673813","wikidata":"https://www.wikidata.org/wiki/Q812534","display_name":"Bayesian probability","level":2,"score":0.48157596588134766},{"id":"https://openalex.org/C207201462","wikidata":"https://www.wikidata.org/wiki/Q182505","display_name":"Bayes' theorem","level":3,"score":0.4557686448097229},{"id":"https://openalex.org/C158207573","wikidata":"https://www.wikidata.org/wiki/Q5747224","display_name":"Heterogeneous network","level":4,"score":0.4464077353477478},{"id":"https://openalex.org/C108037233","wikidata":"https://www.wikidata.org/wiki/Q11375","display_name":"Wireless network","level":3,"score":0.12560096383094788},{"id":"https://openalex.org/C76155785","wikidata":"https://www.wikidata.org/wiki/Q418","display_name":"Telecommunications","level":1,"score":0.0},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.0},{"id":"https://openalex.org/C555944384","wikidata":"https://www.wikidata.org/wiki/Q249","display_name":"Wireless","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003695","descriptor_name":"Delivery of Health Care","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003695","descriptor_name":"Delivery of Health Care","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003695","descriptor_name":"Delivery of Health Care","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006973","descriptor_name":"Hypertension","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006973","descriptor_name":"Hypertension","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006973","descriptor_name":"Hypertension","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008490","descriptor_name":"Medical Informatics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D008490","descriptor_name":"Medical Informatics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D008490","descriptor_name":"Medical Informatics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014920","descriptor_name":"Wine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014920","descriptor_name":"Wine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014920","descriptor_name":"Wine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016011","descriptor_name":"Normal Distribution","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016011","descriptor_name":"Normal Distribution","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016011","descriptor_name":"Normal Distribution","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1371/journal.pcbi.1008735","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1008735","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:33577591","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33577591","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:RePEc:plo:pcbi00:1008735","is_oa":false,"landing_page_url":"https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1008735","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},{"id":"pmh:oai:doaj.org/article:e6f5c6f9eb58449c816de9568c93b0a8","is_oa":true,"landing_page_url":"https://doaj.org/article/e6f5c6f9eb58449c816de9568c93b0a8","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 17, Iss 2, p e1008735 (2021)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:7906470","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7906470","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1008735","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1008735","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.5799999833106995}],"awards":[{"id":"https://openalex.org/G1827501784","display_name":null,"funder_award_id":"031L0032","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"}],"funders":[{"id":"https://openalex.org/F4320310697","display_name":"Joachim Herz Stiftung","ror":"https://ror.org/01j8qgg43"},{"id":"https://openalex.org/F4320316014","display_name":"Fresenius Medical Care North America","ror":"https://ror.org/02avws951"},{"id":"https://openalex.org/F4320321114","display_name":"Bundesministerium f\u00fcr Bildung und Forschung","ror":"https://ror.org/04pz7b180"},{"id":"https://openalex.org/F4320327235","display_name":"Servier","ror":"https://ror.org/034e7c066"},{"id":"https://openalex.org/F4320328630","display_name":"Neuraxpharm","ror":null},{"id":"https://openalex.org/F4320338413","display_name":"Cilag","ror":null},{"id":"https://openalex.org/F6408331188","display_name":"Janssen Australia","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":66,"referenced_works":["https://openalex.org/W1495137606","https://openalex.org/W1511986666","https://openalex.org/W1853119737","https://openalex.org/W1895303386","https://openalex.org/W1970687027","https://openalex.org/W1981727151","https://openalex.org/W1992223383","https://openalex.org/W2002802583","https://openalex.org/W2005550263","https://openalex.org/W2007175522","https://openalex.org/W2021947606","https://openalex.org/W2070323919","https://openalex.org/W2075940779","https://openalex.org/W2081951616","https://openalex.org/W2087885284","https://openalex.org/W2095724929","https://openalex.org/W2096182373","https://openalex.org/W2099950120","https://openalex.org/W2104877015","https://openalex.org/W2111946630","https://openalex.org/W2120742730","https://openalex.org/W2123482298","https://openalex.org/W2128088446","https://openalex.org/W2131014997","https://openalex.org/W2133257147","https://openalex.org/W2136057321","https://openalex.org/W2152482800","https://openalex.org/W2153870396","https://openalex.org/W2153947402","https://openalex.org/W2167190345","https://openalex.org/W2168192898","https://openalex.org/W2170948832","https://openalex.org/W2170962119","https://openalex.org/W2192184307","https://openalex.org/W2210672989","https://openalex.org/W2264272133","https://openalex.org/W2320433812","https://openalex.org/W2401291795","https://openalex.org/W2498761000","https://openalex.org/W2521475965","https://openalex.org/W2549473102","https://openalex.org/W2573268273","https://openalex.org/W2582743722","https://openalex.org/W2620337387","https://openalex.org/W2622524891","https://openalex.org/W2765293807","https://openalex.org/W2782945608","https://openalex.org/W2790626057","https://openalex.org/W2884785945","https://openalex.org/W2896266079","https://openalex.org/W2920904476","https://openalex.org/W2951580354","https://openalex.org/W2964209429","https://openalex.org/W2964476833","https://openalex.org/W2982875109","https://openalex.org/W3088109252","https://openalex.org/W3099913676","https://openalex.org/W3104533353","https://openalex.org/W3114911410","https://openalex.org/W3145511514","https://openalex.org/W4319156734","https://openalex.org/W4399524289","https://openalex.org/W6671102006","https://openalex.org/W6676167818","https://openalex.org/W6682673217","https://openalex.org/W6757450073"],"related_works":["https://openalex.org/W1981780420","https://openalex.org/W2182707996","https://openalex.org/W45233828","https://openalex.org/W2964988449","https://openalex.org/W2397952901","https://openalex.org/W2029380707","https://openalex.org/W4255934811","https://openalex.org/W2465382974","https://openalex.org/W2010229520","https://openalex.org/W2547528905"],"abstract_inverted_index":{"In":[0],"this":[1,63],"work,":[2],"we":[3],"introduce":[4],"an":[5,102,201],"entirely":[6,98],"data-driven":[7],"and":[8,15,21,49,69,93,130,170,179],"automated":[9],"approach":[10],"to":[11,52,67,87,114],"reveal":[12],"disease-associated":[13],"biomarker":[14,147,192],"risk":[16],"factor":[17],"networks":[18,113,139],"from":[19,162],"heterogeneous":[20,61],"high-dimensional":[22],"healthcare":[23],"data.":[24],"Our":[25],"workflow":[26],"is":[27,65],"based":[28],"on":[29,154,160],"Bayesian":[30,58,78,112,127],"networks,":[31,128],"which":[32],"are":[33],"a":[34,117,122],"popular":[35],"tool":[36],"for":[37,54,105,116],"analyzing":[38],"the":[39,106,163,186,196],"interplay":[40],"of":[41,57,90,109,126,146,165],"biomarkers.":[42],"Usually,":[43],"data":[44,161],"require":[45],"extensive":[46],"manual":[47],"preprocessing":[48,64],"dimension":[50],"reduction":[51],"allow":[53],"effective":[55],"learning":[56,80],"networks.":[59,137],"For":[60],"data,":[62,156],"hard":[66],"automatize":[68],"typically":[70],"requires":[71],"domain-specific":[72],"prior":[73],"knowledge.":[74],"We":[75,100,149,183],"here":[76],"combine":[77],"network":[79,188],"with":[81],"hierarchical":[82],"variable":[83],"clustering":[84],"in":[85,167],"order":[86],"detect":[88],"groups":[89],"similar":[91],"features":[92],"learn":[94],"interactions":[95],"between":[96],"them":[97],"automated.":[99],"present":[101],"optimization":[103],"algorithm":[104],"adaptive":[107],"refinement":[108,131],"such":[110],"group":[111,187],"account":[115],"specific":[118],"target":[119],"variable,":[120],"like":[121],"disease.":[123],"The":[124],"combination":[125],"clustering,":[129],"yields":[132],"low-dimensional":[133],"but":[134],"disease-specific":[135],"interaction":[136,204],"These":[138],"provide":[140,200],"easily":[141,202],"interpretable,":[142],"yet":[143],"accurate":[144],"models":[145,189],"interdependencies.":[148],"test":[150],"our":[151],"method":[152],"extensively":[153],"simulated":[155],"as":[157,159,181],"well":[158],"Study":[164],"Health":[166],"Pomerania":[168],"(SHIP-TREND),":[169],"demonstrate":[171],"its":[172],"effectiveness":[173],"using":[174],"non-alcoholic":[175],"fatty":[176],"liver":[177],"disease":[178],"hypertension":[180],"examples.":[182],"show":[184],"that":[185],"outperform":[190],"available":[191],"scores,":[193],"while":[194],"at":[195],"same":[197],"time,":[198],"they":[199],"interpretable":[203],"network.":[205]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":3}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
