{"id":"https://openalex.org/W3098163157","doi":"https://doi.org/10.1371/journal.pcbi.1008277","title":"EventEpi\u2014A natural language processing framework for event-based surveillance","display_name":"EventEpi\u2014A natural language processing framework for event-based surveillance","publication_year":2020,"publication_date":"2020-11-20","ids":{"openalex":"https://openalex.org/W3098163157","doi":"https://doi.org/10.1371/journal.pcbi.1008277","mag":"3098163157","pmid":"https://pubmed.ncbi.nlm.nih.gov/33216746"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1008277","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1008277","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1008277&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1008277&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5066190395","display_name":"Auss Abbood","orcid":"https://orcid.org/0000-0002-4428-168X"},"institutions":[{"id":"https://openalex.org/I24359323","display_name":"Robert Koch Institute","ror":"https://ror.org/01k5qnb77","country_code":"DE","type":"government","lineage":["https://openalex.org/I24359323"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Auss Abbood","raw_affiliation_strings":["Robert Koch Institute (RKI), Berlin, Germany"],"raw_orcid":"https://orcid.org/0000-0002-4428-168X","affiliations":[{"raw_affiliation_string":"Robert Koch Institute (RKI), Berlin, Germany","institution_ids":["https://openalex.org/I24359323"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079624888","display_name":"Alexander Ullrich","orcid":"https://orcid.org/0000-0002-4894-6124"},"institutions":[{"id":"https://openalex.org/I24359323","display_name":"Robert Koch Institute","ror":"https://ror.org/01k5qnb77","country_code":"DE","type":"government","lineage":["https://openalex.org/I24359323"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Alexander Ullrich","raw_affiliation_strings":["Robert Koch Institute (RKI), Berlin, Germany"],"raw_orcid":"https://orcid.org/0000-0002-4894-6124","affiliations":[{"raw_affiliation_string":"Robert Koch Institute (RKI), Berlin, Germany","institution_ids":["https://openalex.org/I24359323"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039992533","display_name":"R\u00fcdiger Busche","orcid":"https://orcid.org/0000-0002-9593-8696"},"institutions":[{"id":"https://openalex.org/I170658231","display_name":"Osnabr\u00fcck University","ror":"https://ror.org/04qmmjx98","country_code":"DE","type":"education","lineage":["https://openalex.org/I170658231"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"R\u00fcdiger Busche","raw_affiliation_strings":["Osnabr\u00fcck University, Osnabr\u00fcck, Lower Saxony, Germany","inserve GmbH, Hannover, Lower Saxony, Germany"],"raw_orcid":"https://orcid.org/0000-0002-9593-8696","affiliations":[{"raw_affiliation_string":"Osnabr\u00fcck University, Osnabr\u00fcck, Lower Saxony, Germany","institution_ids":["https://openalex.org/I170658231"]},{"raw_affiliation_string":"inserve GmbH, Hannover, Lower Saxony, Germany","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5038414162","display_name":"St\u00e9phane Ghozzi","orcid":"https://orcid.org/0000-0002-3911-9573"},"institutions":[{"id":"https://openalex.org/I24359323","display_name":"Robert Koch Institute","ror":"https://ror.org/01k5qnb77","country_code":"DE","type":"government","lineage":["https://openalex.org/I24359323"]},{"id":"https://openalex.org/I4210124929","display_name":"Helmholtz Centre for Infection Research","ror":"https://ror.org/03d0p2685","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I4210124929"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"St\u00e9phane Ghozzi","raw_affiliation_strings":["Helmholtz Centre for Infection Research (HZI), Brunswick, Lower Saxony, Germany","Robert Koch Institute (RKI), Berlin, Germany"],"raw_orcid":"https://orcid.org/0000-0002-3911-9573","affiliations":[{"raw_affiliation_string":"Helmholtz Centre for Infection Research (HZI), Brunswick, Lower Saxony, Germany","institution_ids":["https://openalex.org/I4210124929"]},{"raw_affiliation_string":"Robert Koch Institute (RKI), Berlin, Germany","institution_ids":["https://openalex.org/I24359323"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5038414162","https://openalex.org/A5039992533","https://openalex.org/A5066190395","https://openalex.org/A5079624888"],"corresponding_institution_ids":["https://openalex.org/I170658231","https://openalex.org/I24359323","https://openalex.org/I4210124929"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":2.036,"has_fulltext":false,"cited_by_count":25,"citation_normalized_percentile":{"value":0.87978783,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"16","issue":"11","first_page":"e1008277","last_page":"e1008277"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11819","display_name":"Data-Driven Disease Surveillance","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11819","display_name":"Data-Driven Disease Surveillance","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11147","display_name":"Misinformation and Its Impacts","score":0.9804999828338623,"subfield":{"id":"https://openalex.org/subfields/3312","display_name":"Sociology and Political Science"},"field":{"id":"https://openalex.org/fields/33","display_name":"Social Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6717889904975891},{"id":"https://openalex.org/keywords/relevance","display_name":"Relevance (law)","score":0.5148555636405945},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5053074955940247},{"id":"https://openalex.org/keywords/naive-bayes-classifier","display_name":"Naive Bayes classifier","score":0.478948175907135},{"id":"https://openalex.org/keywords/classifier","display_name":"Classifier (UML)","score":0.47031369805336},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.416882187128067},{"id":"https://openalex.org/keywords/information-extraction","display_name":"Information extraction","score":0.41299203038215637},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.412238746881485},{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.38250428438186646},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.35987719893455505},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3540770411491394},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.3512580394744873}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6717889904975891},{"id":"https://openalex.org/C158154518","wikidata":"https://www.wikidata.org/wiki/Q7310970","display_name":"Relevance (law)","level":2,"score":0.5148555636405945},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5053074955940247},{"id":"https://openalex.org/C52001869","wikidata":"https://www.wikidata.org/wiki/Q812530","display_name":"Naive Bayes classifier","level":3,"score":0.478948175907135},{"id":"https://openalex.org/C95623464","wikidata":"https://www.wikidata.org/wiki/Q1096149","display_name":"Classifier (UML)","level":2,"score":0.47031369805336},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.416882187128067},{"id":"https://openalex.org/C195807954","wikidata":"https://www.wikidata.org/wiki/Q1662562","display_name":"Information extraction","level":2,"score":0.41299203038215637},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.412238746881485},{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.38250428438186646},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.35987719893455505},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3540770411491394},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.3512580394744873},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004196","descriptor_name":"Disease Outbreaks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004196","descriptor_name":"Disease Outbreaks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004196","descriptor_name":"Disease Outbreaks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1371/journal.pcbi.1008277","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1008277","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1008277&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:33216746","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33216746","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:RePEc:plo:pcbi00:1008277","is_oa":false,"landing_page_url":"https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1008277","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},{"id":"pmh:oai:doaj.org/article:2e9a0fc78e744e4c98cf2147da75dd67","is_oa":true,"landing_page_url":"https://doaj.org/article/2e9a0fc78e744e4c98cf2147da75dd67","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 16, Iss 11, p e1008277 (2020)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:7717563","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7717563","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"},{"id":"pmh:oai:repository.helmholtz-hzi.de:10033/622654","is_oa":true,"landing_page_url":"http://hdl.handle.net/10033/622654","pdf_url":null,"source":{"id":"https://openalex.org/S4377196474","display_name":"HZI (Helmholtz Centre for Infection Research)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210124929","host_organization_name":"Helmholtz Centre for Infection Research","host_organization_lineage":["https://openalex.org/I4210124929"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"16","raw_type":"Article"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1008277","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1008277","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1008277&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.4300000071525574,"id":"https://metadata.un.org/sdg/3"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320321721","display_name":"Bundesministerium f\u00fcr Gesundheit","ror":"https://ror.org/05vp4ka74"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3098163157.pdf","grobid_xml":"https://content.openalex.org/works/W3098163157.grobid-xml"},"referenced_works_count":37,"referenced_works":["https://openalex.org/W1521626219","https://openalex.org/W1550206324","https://openalex.org/W1564121197","https://openalex.org/W1815121818","https://openalex.org/W2101234009","https://openalex.org/W2104933073","https://openalex.org/W2129888542","https://openalex.org/W2140336868","https://openalex.org/W2153579005","https://openalex.org/W2155524176","https://openalex.org/W2164330572","https://openalex.org/W2253771223","https://openalex.org/W2274218306","https://openalex.org/W2405124477","https://openalex.org/W2462891382","https://openalex.org/W2521200999","https://openalex.org/W2561412020","https://openalex.org/W2589203314","https://openalex.org/W2621012555","https://openalex.org/W2808127013","https://openalex.org/W2888536529","https://openalex.org/W2914052719","https://openalex.org/W2962739339","https://openalex.org/W2963341956","https://openalex.org/W2963514026","https://openalex.org/W2963908579","https://openalex.org/W2964046515","https://openalex.org/W2964073283","https://openalex.org/W4247008584","https://openalex.org/W4247993926","https://openalex.org/W4289699961","https://openalex.org/W4293713156","https://openalex.org/W4394172515","https://openalex.org/W4394216374","https://openalex.org/W6675354045","https://openalex.org/W6695661434","https://openalex.org/W6753724168"],"related_works":["https://openalex.org/W2361861616","https://openalex.org/W2263699433","https://openalex.org/W2377979023","https://openalex.org/W2218034408","https://openalex.org/W2392921965","https://openalex.org/W2358755282","https://openalex.org/W2625833328","https://openalex.org/W1533177136","https://openalex.org/W4380994516","https://openalex.org/W2251519152"],"abstract_inverted_index":{"According":[0],"to":[1,43,80,180,206,298],"the":[2,23,26,59,89,118,129,163,182,189,220,228,293,299,317],"World":[3],"Health":[4],"Organization":[5],"(WHO),":[6],"around":[7],"60%":[8],"of":[9,33,54,230,248,255,302,316],"all":[10],"outbreaks":[11],"are":[12,271,342],"detected":[13],"using":[14,168,188,233],"informal":[15],"sources.":[16],"In":[17],"many":[18,156],"public":[19,34],"health":[20,35],"institutes,":[21],"including":[22],"WHO":[24],"and":[25,41,64,88,105,124,126,136,166,185,223,236,250,274,296,314,327,340],"Robert":[27],"Koch":[28],"Institute":[29],"(RKI),":[30],"dedicated":[31],"groups":[32],"agents":[36],"sift":[37],"through":[38],"numerous":[39],"articles":[40],"newsletters":[42],"detect":[44],"relevant":[45,111,215,269],"events.":[46],"This":[47],"media":[48],"screening":[49],"is":[50,71,214,218],"one":[51],"important":[52],"part":[53],"event-based":[55],"surveillance":[56],"(EBS).":[57],"Reading":[58],"articles,":[60],"discussing":[61],"their":[62],"relevance,":[63],"putting":[65],"key":[66,131,164,183],"information":[67,103],"into":[68,83,262,276],"a":[69,72,96,169,176,242,246,263,277],"database":[70,192,222],"time-consuming":[73],"process.":[74],"To":[75],"support":[76],"EBS,":[77],"but":[78],"also":[79,282],"gain":[81],"insights":[82],"what":[84],"makes":[85],"an":[86,150,251],"article":[87,209,213],"event":[90],"it":[91,217],"describes":[92],"relevant,":[93],"we":[94,109,141,202,258],"developed":[95],"natural":[97],"language":[98],"processing":[99],"framework":[100],"for":[101,113,159,199],"automated":[102],"extraction":[104],"relevance":[106,200],"scoring.":[107],"First,":[108],"scraped":[110],"sources":[112,270],"EBS":[114,191,221],"as":[115,193],"done":[116],"at":[117],"RKI":[119],"(WHO":[120],"Disease":[121],"Outbreak":[122],"News":[123],"ProMED)":[125],"automatically":[127,272],"extracted":[128,162],"articles'":[130],"data:":[132],"disease,":[133],"country,":[134],"date,":[135],"confirmed-case":[137,186],"count.":[138],"For":[139],"this,":[140],"performed":[142,196],"named":[143],"entity":[144],"recognition":[145],"in":[146,219,292,308,331,335],"two":[147,204],"steps:":[148],"EpiTator,":[149],"open-source":[151],"epidemiological":[152],"annotation":[153],"tool,":[154],"suggested":[155],"different":[157,231],"possibilities":[158],"each.":[160],"We":[161,174,226],"country":[165],"disease":[167],"heuristic":[170],"with":[171,310],"good":[172],"results.":[173],"trained":[175],"naive":[177],"Bayes":[178],"classifier":[179],"find":[181],"date":[184],"count,":[187],"RKI's":[190],"labels":[194],"which":[195,207],"modestly.":[197],"Then,":[198],"scoring,":[201],"defined":[203],"classes":[205],"any":[208,284],"might":[210],"belong:":[211],"The":[212,239,279,320,337],"if":[216],"irrelevant":[224],"otherwise.":[225],"compared":[227],"performance":[229],"classifiers,":[232],"bag-of-words,":[234],"document":[235],"word":[237],"embeddings.":[238],"best":[240],"classifier,":[241],"logistic":[243],"regression,":[244],"achieved":[245],"sensitivity":[247],"0.82":[249],"index":[252],"balanced":[253],"accuracy":[254],"0.61.":[256],"Finally,":[257],"integrated":[259],"these":[260,303],"functionalities":[261],"web":[264],"application":[265],"called":[266],"EventEpi":[267],"where":[268],"analyzed":[273,291],"put":[275],"database.":[278,300],"user":[280],"can":[281,328],"provide":[283],"URL":[285],"or":[286],"text,":[287],"that":[288],"will":[289],"be":[290,306,329],"same":[294],"way":[295],"added":[297],"Each":[301],"steps":[304],"could":[305],"improved,":[307],"particular":[309],"larger":[311],"labeled":[312],"datasets":[313],"fine-tuning":[315],"learning":[318],"algorithms.":[319],"overall":[321],"framework,":[322],"however,":[323],"works":[324],"already":[325],"well":[326],"used":[330],"production,":[332],"promising":[333],"improvements":[334],"EBS.":[336],"source":[338],"code":[339],"data":[341],"publicly":[343],"available":[344],"under":[345],"open":[346],"licenses.":[347]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":6},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":1}],"updated_date":"2026-03-27T05:58:40.876381","created_date":"2025-10-10T00:00:00"}
