{"id":"https://openalex.org/W3011164718","doi":"https://doi.org/10.1371/journal.pcbi.1007654","title":"ftmsRanalysis: An R package for exploratory data analysis and interactive visualization of FT-MS data","display_name":"ftmsRanalysis: An R package for exploratory data analysis and interactive visualization of FT-MS data","publication_year":2020,"publication_date":"2020-03-16","ids":{"openalex":"https://openalex.org/W3011164718","doi":"https://doi.org/10.1371/journal.pcbi.1007654","mag":"3011164718","pmid":"https://pubmed.ncbi.nlm.nih.gov/32176690"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1007654","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1007654","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1007654&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1007654&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5069253580","display_name":"Lisa Bramer","orcid":"https://orcid.org/0000-0002-8384-1926"},"institutions":[{"id":"https://openalex.org/I142606810","display_name":"Pacific Northwest National Laboratory","ror":"https://ror.org/05h992307","country_code":"US","type":"facility","lineage":["https://openalex.org/I1325736334","https://openalex.org/I1330989302","https://openalex.org/I142606810","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Lisa M. Bramer","raw_affiliation_strings":["Computational Analytics Division, Pacific Northwest National Laboratory, Richland, Washington, United States of America"],"raw_orcid":"https://orcid.org/0000-0002-8384-1926","affiliations":[{"raw_affiliation_string":"Computational Analytics Division, Pacific Northwest National Laboratory, Richland, Washington, United States of America","institution_ids":["https://openalex.org/I142606810"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5104360622","display_name":"Amanda M. White","orcid":null},"institutions":[{"id":"https://openalex.org/I142606810","display_name":"Pacific Northwest National Laboratory","ror":"https://ror.org/05h992307","country_code":"US","type":"facility","lineage":["https://openalex.org/I1325736334","https://openalex.org/I1330989302","https://openalex.org/I142606810","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Amanda M. White","raw_affiliation_strings":["Computational Analytics Division, Pacific Northwest National Laboratory, Richland, Washington, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computational Analytics Division, Pacific Northwest National Laboratory, Richland, Washington, United States of America","institution_ids":["https://openalex.org/I142606810"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008025648","display_name":"Kelly G. Stratton","orcid":"https://orcid.org/0000-0002-1721-9688"},"institutions":[{"id":"https://openalex.org/I142606810","display_name":"Pacific Northwest National Laboratory","ror":"https://ror.org/05h992307","country_code":"US","type":"facility","lineage":["https://openalex.org/I1325736334","https://openalex.org/I1330989302","https://openalex.org/I142606810","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kelly G. Stratton","raw_affiliation_strings":["Computational Analytics Division, Pacific Northwest National Laboratory, Richland, Washington, United States of America"],"raw_orcid":"https://orcid.org/0000-0002-1721-9688","affiliations":[{"raw_affiliation_string":"Computational Analytics Division, Pacific Northwest National Laboratory, Richland, Washington, United States of America","institution_ids":["https://openalex.org/I142606810"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055887076","display_name":"Allison Thompson","orcid":"https://orcid.org/0000-0002-9791-4444"},"institutions":[{"id":"https://openalex.org/I142606810","display_name":"Pacific Northwest National Laboratory","ror":"https://ror.org/05h992307","country_code":"US","type":"facility","lineage":["https://openalex.org/I1325736334","https://openalex.org/I1330989302","https://openalex.org/I142606810","https://openalex.org/I39565521"]},{"id":"https://openalex.org/I2801280572","display_name":"Environmental Molecular Sciences Laboratory","ror":"https://ror.org/04rc0xn13","country_code":"US","type":"facility","lineage":["https://openalex.org/I1325736334","https://openalex.org/I1330989302","https://openalex.org/I142606810","https://openalex.org/I2801280572","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Allison M. Thompson","raw_affiliation_strings":["Environmental Molecular Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, United States of America"],"raw_orcid":"https://orcid.org/0000-0002-9791-4444","affiliations":[{"raw_affiliation_string":"Environmental Molecular Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, United States of America","institution_ids":["https://openalex.org/I2801280572","https://openalex.org/I142606810"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086023229","display_name":"Daniel Claborne","orcid":"https://orcid.org/0000-0001-5293-3628"},"institutions":[{"id":"https://openalex.org/I142606810","display_name":"Pacific Northwest National Laboratory","ror":"https://ror.org/05h992307","country_code":"US","type":"facility","lineage":["https://openalex.org/I1325736334","https://openalex.org/I1330989302","https://openalex.org/I142606810","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Daniel Claborne","raw_affiliation_strings":["Computational Analytics Division, Pacific Northwest National Laboratory, Richland, Washington, United States of America"],"raw_orcid":"https://orcid.org/0000-0001-5293-3628","affiliations":[{"raw_affiliation_string":"Computational Analytics Division, Pacific Northwest National Laboratory, Richland, Washington, United States of America","institution_ids":["https://openalex.org/I142606810"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000311800","display_name":"Kirsten Hofmockel","orcid":"https://orcid.org/0000-0003-1586-2167"},"institutions":[{"id":"https://openalex.org/I142606810","display_name":"Pacific Northwest National Laboratory","ror":"https://ror.org/05h992307","country_code":"US","type":"facility","lineage":["https://openalex.org/I1325736334","https://openalex.org/I1330989302","https://openalex.org/I142606810","https://openalex.org/I39565521"]},{"id":"https://openalex.org/I2801280572","display_name":"Environmental Molecular Sciences Laboratory","ror":"https://ror.org/04rc0xn13","country_code":"US","type":"facility","lineage":["https://openalex.org/I1325736334","https://openalex.org/I1330989302","https://openalex.org/I142606810","https://openalex.org/I2801280572","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kirsten Hofmockel","raw_affiliation_strings":["Environmental Molecular Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Environmental Molecular Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, United States of America","institution_ids":["https://openalex.org/I2801280572","https://openalex.org/I142606810"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5055701440","display_name":"Lee Ann McCue","orcid":"https://orcid.org/0000-0003-4456-517X"},"institutions":[{"id":"https://openalex.org/I142606810","display_name":"Pacific Northwest National Laboratory","ror":"https://ror.org/05h992307","country_code":"US","type":"facility","lineage":["https://openalex.org/I1325736334","https://openalex.org/I1330989302","https://openalex.org/I142606810","https://openalex.org/I39565521"]},{"id":"https://openalex.org/I2801280572","display_name":"Environmental Molecular Sciences Laboratory","ror":"https://ror.org/04rc0xn13","country_code":"US","type":"facility","lineage":["https://openalex.org/I1325736334","https://openalex.org/I1330989302","https://openalex.org/I142606810","https://openalex.org/I2801280572","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lee Ann McCue","raw_affiliation_strings":["Environmental Molecular Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, United States of America"],"raw_orcid":"https://orcid.org/0000-0003-4456-517X","affiliations":[{"raw_affiliation_string":"Environmental Molecular Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, United States of America","institution_ids":["https://openalex.org/I2801280572","https://openalex.org/I142606810"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5069253580"],"corresponding_institution_ids":["https://openalex.org/I142606810"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":3.4275,"has_fulltext":true,"cited_by_count":75,"citation_normalized_percentile":{"value":0.93598077,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":100},"biblio":{"volume":"16","issue":"3","first_page":"e1007654","last_page":"e1007654"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9965000152587891,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9965000152587891,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13398","display_name":"Data Analysis with R","score":0.982200026512146,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12073","display_name":"Isotope Analysis in Ecology","score":0.9574000239372253,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.7985318899154663},{"id":"https://openalex.org/keywords/health-informatics-tools","display_name":"Health informatics tools","score":0.6586793661117554},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6577336192131042},{"id":"https://openalex.org/keywords/disk-formatting","display_name":"Disk formatting","score":0.5883644819259644},{"id":"https://openalex.org/keywords/exploratory-data-analysis","display_name":"Exploratory data analysis","score":0.5286303758621216},{"id":"https://openalex.org/keywords/data-visualization","display_name":"Data visualization","score":0.5018644332885742},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.36246681213378906},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.34626686573028564},{"id":"https://openalex.org/keywords/informatics","display_name":"Informatics","score":0.2160005271434784},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.12259334325790405}],"concepts":[{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.7985318899154663},{"id":"https://openalex.org/C167785021","wikidata":"https://www.wikidata.org/wiki/Q5691083","display_name":"Health informatics tools","level":3,"score":0.6586793661117554},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6577336192131042},{"id":"https://openalex.org/C88006597","wikidata":"https://www.wikidata.org/wiki/Q690117","display_name":"Disk formatting","level":2,"score":0.5883644819259644},{"id":"https://openalex.org/C120894424","wikidata":"https://www.wikidata.org/wiki/Q1322871","display_name":"Exploratory data analysis","level":2,"score":0.5286303758621216},{"id":"https://openalex.org/C172367668","wikidata":"https://www.wikidata.org/wiki/Q6504956","display_name":"Data visualization","level":3,"score":0.5018644332885742},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.36246681213378906},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.34626686573028564},{"id":"https://openalex.org/C191630685","wikidata":"https://www.wikidata.org/wiki/Q4027615","display_name":"Informatics","level":2,"score":0.2160005271434784},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.12259334325790405},{"id":"https://openalex.org/C119599485","wikidata":"https://www.wikidata.org/wiki/Q43035","display_name":"Electrical engineering","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D005583","descriptor_name":"Fourier Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005583","descriptor_name":"Fourier Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005583","descriptor_name":"Fourier Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012988","descriptor_name":"Soil Microbiology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012988","descriptor_name":"Soil Microbiology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012988","descriptor_name":"Soil Microbiology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":9,"locations":[{"id":"doi:10.1371/journal.pcbi.1007654","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1007654","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1007654&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:32176690","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/32176690","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:RePEc:plo:pcbi00:1007654","is_oa":false,"landing_page_url":"https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1007654","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},{"id":"pmh:oai:doaj.org/article:aecc3889a46c4307955c35bc521355c7","is_oa":true,"landing_page_url":"https://doaj.org/article/aecc3889a46c4307955c35bc521355c7","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 16, Iss 3, p e1007654 (2020)","raw_type":"article"},{"id":"pmh:oai:figshare.com:article/11990115","is_oa":true,"landing_page_url":"https://figshare.com/articles/ftmsRanalysis_An_R_package_for_exploratory_data_analysis_and_interactive_visualization_of_FT-MS_data/11990115","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},{"id":"pmh:oai:osti.gov:1604836","is_oa":true,"landing_page_url":"https://www.osti.gov/biblio/1604836","pdf_url":null,"source":{"id":"https://openalex.org/S4306402487","display_name":"OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I139351228","host_organization_name":"Office of Scientific and Technical Information","host_organization_lineage":["https://openalex.org/I139351228"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null},{"id":"pmh:oai:osti.gov:1606467","is_oa":true,"landing_page_url":"https://www.osti.gov/biblio/1606467","pdf_url":null,"source":{"id":"https://openalex.org/S4306402487","display_name":"OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I139351228","host_organization_name":"Office of Scientific and Technical Information","host_organization_lineage":["https://openalex.org/I139351228"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null},{"id":"pmh:oai:osti.gov:1608417","is_oa":true,"landing_page_url":"https://www.osti.gov/biblio/1608417","pdf_url":null,"source":{"id":"https://openalex.org/S4306402487","display_name":"OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I139351228","host_organization_name":"Office of Scientific and Technical Information","host_organization_lineage":["https://openalex.org/I139351228"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:7098629","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7098629","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1007654","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1007654","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1007654&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.4099999964237213,"display_name":"Life in Land","id":"https://metadata.un.org/sdg/15"}],"awards":[{"id":"https://openalex.org/G1899721271","display_name":null,"funder_award_id":"AC05-76RL01830","funder_id":"https://openalex.org/F4320306250","funder_display_name":"Battelle"},{"id":"https://openalex.org/G1967746503","display_name":null,"funder_award_id":"DE-AC05-76RL01830","funder_id":"https://openalex.org/F4320338354","funder_display_name":"Pacific Northwest National Laboratory"},{"id":"https://openalex.org/G2506945562","display_name":null,"funder_award_id":"76RL01830","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G2510423872","display_name":null,"funder_award_id":"AC05-76RL01830","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G2820049545","display_name":null,"funder_award_id":"AC05-76RL01830","funder_id":"https://openalex.org/F4320337509","funder_display_name":"Biological and Environmental Research"},{"id":"https://openalex.org/G3289159562","display_name":null,"funder_award_id":"No. DE-AC05-76RL01830","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G3448260292","display_name":null,"funder_award_id":"Contract DE-AC05-76RL01830","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G3508161151","display_name":null,"funder_award_id":"grid.436923.9","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G5321382714","display_name":null,"funder_award_id":"76RL01830","funder_id":"https://openalex.org/F4320338354","funder_display_name":"Pacific Northwest National Laboratory"},{"id":"https://openalex.org/G5373841109","display_name":null,"funder_award_id":"76RL01830","funder_id":"https://openalex.org/F4320337509","funder_display_name":"Biological and Environmental Research"},{"id":"https://openalex.org/G5726405315","display_name":null,"funder_award_id":"DE-AC05","funder_id":"https://openalex.org/F4320306250","funder_display_name":"Battelle"},{"id":"https://openalex.org/G6138110037","display_name":null,"funder_award_id":"DE-AC05-76RL01830","funder_id":"https://openalex.org/F4320337509","funder_display_name":"Biological and Environmental Research"},{"id":"https://openalex.org/G6664334341","display_name":null,"funder_award_id":"DE-AC05-76RL01830","funder_id":"https://openalex.org/F4320306250","funder_display_name":"Battelle"},{"id":"https://openalex.org/G7125981805","display_name":null,"funder_award_id":"DE-AC05-76RL01830","funder_id":"https://openalex.org/F4320332359","funder_display_name":"Office of Science"},{"id":"https://openalex.org/G7562546725","display_name":null,"funder_award_id":"436923.9","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G7673727097","display_name":null,"funder_award_id":"grid.436923.9","funder_id":"https://openalex.org/F4320332359","funder_display_name":"Office of Science"},{"id":"https://openalex.org/G7913850483","display_name":null,"funder_award_id":"grid.436923.9","funder_id":"https://openalex.org/F4320337509","funder_display_name":"Biological and Environmental Research"},{"id":"https://openalex.org/G7995982022","display_name":null,"funder_award_id":"DE-AC05","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"}],"funders":[{"id":"https://openalex.org/F4320306084","display_name":"U.S. Department of Energy","ror":"https://ror.org/01bj3aw27"},{"id":"https://openalex.org/F4320306250","display_name":"Battelle","ror":"https://ror.org/01h5tnr73"},{"id":"https://openalex.org/F4320332359","display_name":"Office of Science","ror":"https://ror.org/00mmn6b08"},{"id":"https://openalex.org/F4320337509","display_name":"Biological and Environmental Research","ror":"https://ror.org/0114b2m14"},{"id":"https://openalex.org/F4320338354","display_name":"Pacific Northwest National Laboratory","ror":"https://ror.org/05h992307"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3011164718.pdf","grobid_xml":"https://content.openalex.org/works/W3011164718.grobid-xml"},"referenced_works_count":30,"referenced_works":["https://openalex.org/W1703799520","https://openalex.org/W1971983473","https://openalex.org/W1977449207","https://openalex.org/W1979230659","https://openalex.org/W1985030578","https://openalex.org/W1995373686","https://openalex.org/W2050052909","https://openalex.org/W2072877984","https://openalex.org/W2074704891","https://openalex.org/W2082282323","https://openalex.org/W2086681655","https://openalex.org/W2087777284","https://openalex.org/W2107083991","https://openalex.org/W2122244820","https://openalex.org/W2128601422","https://openalex.org/W2160927412","https://openalex.org/W2173310660","https://openalex.org/W2195029416","https://openalex.org/W2234146933","https://openalex.org/W2534255695","https://openalex.org/W2571488549","https://openalex.org/W2571557161","https://openalex.org/W2588569060","https://openalex.org/W2768082169","https://openalex.org/W2784077712","https://openalex.org/W2799896114","https://openalex.org/W2898149905","https://openalex.org/W2898589119","https://openalex.org/W4251339138","https://openalex.org/W4399649310"],"related_works":["https://openalex.org/W2013728941","https://openalex.org/W4225274103","https://openalex.org/W2154046714","https://openalex.org/W2189613078","https://openalex.org/W2579659702","https://openalex.org/W2923661510","https://openalex.org/W1574055964","https://openalex.org/W1965329638","https://openalex.org/W2542318691","https://openalex.org/W2751110224"],"abstract_inverted_index":{"The":[0,106],"high-resolution":[1],"and":[2,25,38,68,71,96,100,102,114,118,131,154],"mass":[3,8],"accuracy":[4],"of":[5,22,31,63,77,93,111,121,151],"Fourier":[6],"transform":[7],"spectrometry":[9],"(FT-MS)":[10],"has":[11],"made":[12],"it":[13],"an":[14,85,90],"increasingly":[15],"popular":[16],"technique":[17],"for":[18,47,158],"discerning":[19],"the":[20,61,148,152,156],"composition":[21],"soil,":[23],"plant":[24],"aquatic":[26],"samples":[27,79],"containing":[28],"complex":[29,78,122],"mixtures":[30],"proteins,":[32],"carbohydrates,":[33],"lipids,":[34],"lignins,":[35],"hydrocarbons,":[36],"phytochemicals":[37],"other":[39],"compounds.":[40],"Thus,":[41],"there":[42],"is":[43],"a":[44,109,129,143],"growing":[45],"demand":[46],"informatics":[48],"tools":[49],"to":[50,59,66,72,128],"analyze":[51],"FT-MS":[52,140],"data":[53,94,141],"that":[54],"will":[55],"aid":[56],"investigators":[57],"seeking":[58],"understand":[60],"availability":[62],"carbon":[64],"compounds":[65],"biotic":[67],"abiotic":[69],"oxidation":[70],"compare":[73],"fundamental":[74],"chemical":[75],"properties":[76],"across":[80],"groups.":[81],"We":[82],"present":[83],"ftmsRanalysis,":[84],"R":[86],"package":[87,107,153],"which":[88,126],"provides":[89,108],"extensive":[91],"collection":[92],"formatting":[95],"processing,":[97],"filtering,":[98],"visualization,":[99],"sample":[101],"group":[103],"comparison":[104],"functionalities.":[105],"suite":[110],"plotting":[112],"methods":[113],"enables":[115],"expedient,":[116],"flexible":[117],"interactive":[119,132,160],"visualization":[120,133],"datasets":[123],"through":[124],"functions":[125],"link":[127],"powerful":[130],"user":[134],"interface,":[135],"Trelliscope.":[136],"Example":[137],"analysis":[138],"using":[139],"from":[142],"soil":[144],"microbiology":[145],"study":[146],"demonstrates":[147],"core":[149],"functionality":[150],"highlights":[155],"capabilities":[157],"producing":[159],"visualizations.":[161]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":10},{"year":2024,"cited_by_count":22},{"year":2023,"cited_by_count":17},{"year":2022,"cited_by_count":12},{"year":2021,"cited_by_count":9},{"year":2020,"cited_by_count":3}],"updated_date":"2026-04-25T08:17:42.794288","created_date":"2025-10-10T00:00:00"}
