{"id":"https://openalex.org/W3004856249","doi":"https://doi.org/10.1371/journal.pcbi.1007552","title":"Predicting colorectal cancer risk from adenoma detection via a two-type branching process model","display_name":"Predicting colorectal cancer risk from adenoma detection via a two-type branching process model","publication_year":2020,"publication_date":"2020-02-05","ids":{"openalex":"https://openalex.org/W3004856249","doi":"https://doi.org/10.1371/journal.pcbi.1007552","mag":"3004856249","pmid":"https://pubmed.ncbi.nlm.nih.gov/32023238"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1007552","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1007552","pdf_url":"https://storage.googleapis.com/plos-corpus-prod/10.1371/journal.pcbi.1007552/1/pcbi.1007552.pdf?X-Goog-Algorithm=GOOG4-RSA-SHA256&X-Goog-Credential=wombat-sa%40plos-prod.iam.gserviceaccount.com%2F20210218%2Fauto%2Fstorage%2Fgoog4_request&X-Goog-Date=20210218T132002Z&X-Goog-Expires=3600&X-Goog-SignedHeaders=host&X-Goog-Signature=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","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://storage.googleapis.com/plos-corpus-prod/10.1371/journal.pcbi.1007552/1/pcbi.1007552.pdf?X-Goog-Algorithm=GOOG4-RSA-SHA256&X-Goog-Credential=wombat-sa%40plos-prod.iam.gserviceaccount.com%2F20210218%2Fauto%2Fstorage%2Fgoog4_request&X-Goog-Date=20210218T132002Z&X-Goog-Expires=3600&X-Goog-SignedHeaders=host&X-Goog-Signature=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","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5054526298","display_name":"Brian M. Lang","orcid":"https://orcid.org/0000-0003-1121-5982"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Brian M. Lang","raw_affiliation_strings":["Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland","SIB Swiss Institute of Bioinformatics, Basel, Switzerland"],"raw_orcid":"https://orcid.org/0000-0003-1121-5982","affiliations":[{"raw_affiliation_string":"Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"SIB Swiss Institute of Bioinformatics, Basel, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038666930","display_name":"Jack Kuipers","orcid":"https://orcid.org/0000-0001-5357-2705"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Jack Kuipers","raw_affiliation_strings":["Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland","SIB Swiss Institute of Bioinformatics, Basel, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"SIB Swiss Institute of Bioinformatics, Basel, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054681942","display_name":"Benjamin Misselwitz","orcid":"https://orcid.org/0000-0002-8719-5175"},"institutions":[{"id":"https://openalex.org/I2801112126","display_name":"University Hospital of Bern","ror":"https://ror.org/01q9sj412","country_code":"CH","type":"healthcare","lineage":["https://openalex.org/I2801112126"]},{"id":"https://openalex.org/I4210100468","display_name":"University Hospital of Zurich","ror":"https://ror.org/01462r250","country_code":"CH","type":"funder","lineage":["https://openalex.org/I4210100468"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Benjamin Misselwitz","raw_affiliation_strings":["Department of Gastroenterology and Hepatology, University Hospital Zurich and Zurich University, Zurich, Switzerland","Department of Visceral Surgery and Medicine, Inselspital Bern and Bern University, Bern, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Gastroenterology and Hepatology, University Hospital Zurich and Zurich University, Zurich, Switzerland","institution_ids":["https://openalex.org/I4210100468"]},{"raw_affiliation_string":"Department of Visceral Surgery and Medicine, Inselspital Bern and Bern University, Bern, Switzerland","institution_ids":["https://openalex.org/I2801112126"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5035497488","display_name":"Niko Beerenwinkel","orcid":"https://orcid.org/0000-0002-0573-6119"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":true,"raw_author_name":"Niko Beerenwinkel","raw_affiliation_strings":["Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland","SIB Swiss Institute of Bioinformatics, Basel, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"SIB Swiss Institute of Bioinformatics, Basel, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5035497488"],"corresponding_institution_ids":["https://openalex.org/I12708293","https://openalex.org/I35440088"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2096,"currency":"EUR","value_usd":2260},"fwci":1.5913,"has_fulltext":false,"cited_by_count":22,"citation_normalized_percentile":{"value":0.85559839,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":98},"biblio":{"volume":"16","issue":"2","first_page":"e1007552","last_page":"e1007552"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10552","display_name":"Colorectal Cancer Screening and Detection","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10552","display_name":"Colorectal Cancer Screening and Detection","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11369","display_name":"Genetic factors in colorectal cancer","score":0.9761000275611877,"subfield":{"id":"https://openalex.org/subfields/2734","display_name":"Pathology and Forensic Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10696","display_name":"Gastric Cancer Management and Outcomes","score":0.972599983215332,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/colorectal-cancer","display_name":"Colorectal cancer","score":0.7438492774963379},{"id":"https://openalex.org/keywords/adenoma","display_name":"Adenoma","score":0.6791890859603882},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.508091926574707},{"id":"https://openalex.org/keywords/colorectal-adenoma","display_name":"Colorectal adenoma","score":0.5006892681121826},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.4834612309932709},{"id":"https://openalex.org/keywords/epidemiology","display_name":"Epidemiology","score":0.4654800295829773},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.4490620493888855},{"id":"https://openalex.org/keywords/incidence","display_name":"Incidence (geometry)","score":0.4282992482185364},{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.42784184217453003},{"id":"https://openalex.org/keywords/oncology","display_name":"Oncology","score":0.41110026836395264},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3354603350162506},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3246181607246399},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.1900879144668579}],"concepts":[{"id":"https://openalex.org/C526805850","wikidata":"https://www.wikidata.org/wiki/Q188874","display_name":"Colorectal cancer","level":3,"score":0.7438492774963379},{"id":"https://openalex.org/C2777428134","wikidata":"https://www.wikidata.org/wiki/Q272741","display_name":"Adenoma","level":2,"score":0.6791890859603882},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.508091926574707},{"id":"https://openalex.org/C2776861080","wikidata":"https://www.wikidata.org/wiki/Q2825480","display_name":"Colorectal adenoma","level":4,"score":0.5006892681121826},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.4834612309932709},{"id":"https://openalex.org/C107130276","wikidata":"https://www.wikidata.org/wiki/Q133805","display_name":"Epidemiology","level":2,"score":0.4654800295829773},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.4490620493888855},{"id":"https://openalex.org/C61511704","wikidata":"https://www.wikidata.org/wiki/Q1671857","display_name":"Incidence (geometry)","level":2,"score":0.4282992482185364},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.42784184217453003},{"id":"https://openalex.org/C143998085","wikidata":"https://www.wikidata.org/wiki/Q162555","display_name":"Oncology","level":1,"score":0.41110026836395264},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3354603350162506},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3246181607246399},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1900879144668579},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000236","descriptor_name":"Adenoma","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":false},{"descriptor_ui":"D000236","descriptor_name":"Adenoma","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":false},{"descriptor_ui":"D000236","descriptor_name":"Adenoma","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":false},{"descriptor_ui":"D000236","descriptor_name":"Adenoma","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":false},{"descriptor_ui":"D000236","descriptor_name":"Adenoma","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D000236","descriptor_name":"Adenoma","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D000236","descriptor_name":"Adenoma","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D000236","descriptor_name":"Adenoma","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011336","descriptor_name":"Probability","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011336","descriptor_name":"Probability","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011336","descriptor_name":"Probability","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011336","descriptor_name":"Probability","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012307","descriptor_name":"Risk Factors","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012307","descriptor_name":"Risk Factors","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012307","descriptor_name":"Risk Factors","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012307","descriptor_name":"Risk Factors","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015179","descriptor_name":"Colorectal Neoplasms","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D015179","descriptor_name":"Colorectal Neoplasms","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D015179","descriptor_name":"Colorectal Neoplasms","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D015179","descriptor_name":"Colorectal Neoplasms","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D015179","descriptor_name":"Colorectal Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D015179","descriptor_name":"Colorectal Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D015179","descriptor_name":"Colorectal Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D015179","descriptor_name":"Colorectal Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015994","descriptor_name":"Incidence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015994","descriptor_name":"Incidence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015994","descriptor_name":"Incidence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015994","descriptor_name":"Incidence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018426","descriptor_name":"SEER Program","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018426","descriptor_name":"SEER Program","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018426","descriptor_name":"SEER Program","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018426","descriptor_name":"SEER Program","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":10,"locations":[{"id":"doi:10.1371/journal.pcbi.1007552","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1007552","pdf_url":"https://storage.googleapis.com/plos-corpus-prod/10.1371/journal.pcbi.1007552/1/pcbi.1007552.pdf?X-Goog-Algorithm=GOOG4-RSA-SHA256&X-Goog-Credential=wombat-sa%40plos-prod.iam.gserviceaccount.com%2F20210218%2Fauto%2Fstorage%2Fgoog4_request&X-Goog-Date=20210218T132002Z&X-Goog-Expires=3600&X-Goog-SignedHeaders=host&X-Goog-Signature=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","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:32023238","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/32023238","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:doi:10.5167/uzh-187572","is_oa":false,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4406922384","display_name":"Open MIND","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:RePEc:plo:pcbi00:1007552","is_oa":false,"landing_page_url":"https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1007552","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},{"id":"pmh:oai:boris.unibe.ch:149312","is_oa":true,"landing_page_url":"https://boris.unibe.ch/149312/","pdf_url":null,"source":{"id":"https://openalex.org/S4306401086","display_name":"Bern Open Repository and Information System (University of Bern)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I118564535","host_organization_name":"University of Bern","host_organization_lineage":["https://openalex.org/I118564535"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Lang, Brian M.; Kuipers, Jack; Misselwitz, Benjamin; Beerenwinkel, Niko (2020). Predicting colorectal cancer risk from adenoma detection via a two-type branching process model. PLoS computational biology, 16(2), e1007552. Public Library of Science 10.1371/journal.pcbi.1007552 <http://dx.doi.org/10.1371/journal.pcbi.1007552>","raw_type":"PeerReviewed"},{"id":"pmh:oai:doaj.org/article:012026f98f784a1a8a979b1bb4431bf9","is_oa":true,"landing_page_url":"https://doaj.org/article/012026f98f784a1a8a979b1bb4431bf9","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 16, Iss 2, p e1007552 (2020)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:5965374","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7001909","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:figshare.com:article/11809611","is_oa":true,"landing_page_url":"https://figshare.com/articles/journal_contribution/Predicting_colorectal_cancer_risk_from_adenoma_detection_via_a_two-type_branching_process_model/11809611","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:www.research-collection.ethz.ch:20.500.11850/399344","is_oa":true,"landing_page_url":"http://hdl.handle.net/20.500.11850/399344","pdf_url":null,"source":{"id":"https://openalex.org/S4306402302","display_name":"Repository for Publications and Research Data (ETH Zurich)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I35440088","host_organization_name":"ETH Zurich","host_organization_lineage":["https://openalex.org/I35440088"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, 16 (2)","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"doi:10.3929/ethz-b-000399344","is_oa":true,"landing_page_url":"https://doi.org/10.3929/ethz-b-000399344","pdf_url":null,"source":{"id":"https://openalex.org/S7407051236","display_name":"ETH Z\u00fcrich Research Collection","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article-journal"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1007552","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1007552","pdf_url":"https://storage.googleapis.com/plos-corpus-prod/10.1371/journal.pcbi.1007552/1/pcbi.1007552.pdf?X-Goog-Algorithm=GOOG4-RSA-SHA256&X-Goog-Credential=wombat-sa%40plos-prod.iam.gserviceaccount.com%2F20210218%2Fauto%2Fstorage%2Fgoog4_request&X-Goog-Date=20210218T132002Z&X-Goog-Expires=3600&X-Goog-SignedHeaders=host&X-Goog-Signature=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","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.8500000238418579,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"awards":[{"id":"https://openalex.org/G2610221072","display_name":null,"funder_award_id":"609883","funder_id":"https://openalex.org/F4320334678","funder_display_name":"European Research Council"},{"id":"https://openalex.org/G3652850363","display_name":null,"funder_award_id":"KFS-2977-08-2012","funder_id":"https://openalex.org/F4320322583","funder_display_name":"Krebsliga Schweiz"}],"funders":[{"id":"https://openalex.org/F4320322583","display_name":"Krebsliga Schweiz","ror":"https://ror.org/01pd7my79"},{"id":"https://openalex.org/F4320334678","display_name":"European Research Council","ror":"https://ror.org/0472cxd90"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3004856249.pdf","grobid_xml":"https://content.openalex.org/works/W3004856249.grobid-xml"},"referenced_works_count":64,"referenced_works":["https://openalex.org/W214964446","https://openalex.org/W1517389415","https://openalex.org/W1529502113","https://openalex.org/W1534808934","https://openalex.org/W1700709886","https://openalex.org/W1861085621","https://openalex.org/W1908327267","https://openalex.org/W1969651471","https://openalex.org/W1972779868","https://openalex.org/W1974402529","https://openalex.org/W1985091316","https://openalex.org/W1989737381","https://openalex.org/W1995901688","https://openalex.org/W2002355836","https://openalex.org/W2008227339","https://openalex.org/W2010814322","https://openalex.org/W2019349530","https://openalex.org/W2037065992","https://openalex.org/W2046288207","https://openalex.org/W2048911155","https://openalex.org/W2051617372","https://openalex.org/W2058043554","https://openalex.org/W2064706579","https://openalex.org/W2066861312","https://openalex.org/W2084924279","https://openalex.org/W2085807917","https://openalex.org/W2104824960","https://openalex.org/W2111916909","https://openalex.org/W2117413570","https://openalex.org/W2120170803","https://openalex.org/W2123431502","https://openalex.org/W2135535735","https://openalex.org/W2137635563","https://openalex.org/W2140817080","https://openalex.org/W2141163897","https://openalex.org/W2146233513","https://openalex.org/W2146430570","https://openalex.org/W2147579615","https://openalex.org/W2150528471","https://openalex.org/W2152506548","https://openalex.org/W2153618863","https://openalex.org/W2154225779","https://openalex.org/W2154981835","https://openalex.org/W2159609271","https://openalex.org/W2161254570","https://openalex.org/W2164141029","https://openalex.org/W2171074980","https://openalex.org/W2269469491","https://openalex.org/W2319293423","https://openalex.org/W2409661721","https://openalex.org/W2443966614","https://openalex.org/W2570618306","https://openalex.org/W2613868166","https://openalex.org/W2622388981","https://openalex.org/W2622694076","https://openalex.org/W2623271843","https://openalex.org/W2894974194","https://openalex.org/W2901221037","https://openalex.org/W2953483101","https://openalex.org/W3099373549","https://openalex.org/W4248142848","https://openalex.org/W6633658626","https://openalex.org/W6676659936","https://openalex.org/W6764835418"],"related_works":["https://openalex.org/W1968942241","https://openalex.org/W4387734246","https://openalex.org/W2784843214","https://openalex.org/W2155472398","https://openalex.org/W2353266648","https://openalex.org/W3150748277","https://openalex.org/W2168909107","https://openalex.org/W2755261548","https://openalex.org/W2568144455","https://openalex.org/W2359025185"],"abstract_inverted_index":{"Despite":[0],"advances":[1],"in":[2,37,171,187],"the":[3,11,14,38,43,59,92,96,108,111,122,136,140,156,177,204],"modeling":[4],"and":[5,34,55,62,78,99,113,184,211,213,222,228],"understanding":[6],"of":[7,13,31,42,95,139,142,174,179,208],"colorectal":[8,21,52],"cancer":[9,53,97,143,175,223],"development,":[10],"dynamics":[12,207],"progression":[15],"from":[16,58,125],"benign":[17],"adenomatous":[18],"polyp":[19],"to":[20,91,110,127,134,158],"carcinoma":[22,79],"are":[23],"still":[24],"not":[25],"fully":[26],"resolved.":[27],"To":[28,81],"take":[29],"advantage":[30],"adenoma":[32,77,126,181,220],"size":[33,56,93,186],"prevalence":[35,221],"data":[36,57],"National":[39],"Endoscopic":[40],"Database":[41],"Clinical":[44],"Outcomes":[45],"Research":[46],"Initiative":[47],"(CORI)":[48],"as":[49,51,219],"well":[50],"incidence":[54,224],"Surveillance":[60],"Epidemiology":[61],"End":[63],"Results":[64],"(SEER)":[65],"database,":[66],"we":[67,85,116,167],"construct":[68],"a":[69,87,151,169],"two-type":[70,199],"branching":[71,200],"process":[72,201],"model":[73,109,202],"with":[74],"compartments":[75],"representing":[76],"cells.":[80],"perform":[82],"parameter":[83],"inference":[84],"present":[86],"new":[88],"large-size":[89],"approximation":[90],"distribution":[94],"compartment":[98],"validate":[100],"our":[101,198],"approach":[102],"on":[103],"simulated":[104],"data.":[105],"By":[106],"fitting":[107],"CORI":[112],"SEER":[114],"data,":[115],"learn":[117],"biologically":[118],"relevant":[119],"parameters,":[120],"including":[121],"transition":[123],"rate":[124],"cancer.":[128],"The":[129],"inferred":[130],"parameters":[131],"allow":[132],"us":[133],"predict":[135],"individualized":[137],"risk":[138,190],"presence":[141,178],"cells":[144],"for":[145],"each":[146],"screened":[147],"patient.":[148],"We":[149,195],"provide":[150],"web":[152],"application":[153],"which":[154],"allows":[155],"user":[157],"calculate":[159],"these":[160],"individual":[161],"probabilities":[162],"at":[163,192],"https://ccrc-eth.shinyapps.io/CCRC/.":[164],"For":[165],"example,":[166],"find":[168],"1":[170],"100":[172],"chance":[173],"given":[176],"an":[180,188],"between":[182],"10":[183],"20mm":[185],"average":[189],"patient":[191],"age":[193],"50.":[194],"show":[196],"that":[197],"recapitulates":[203],"early":[205],"growth":[206],"colon":[209],"adenomas":[210],"cancers":[212],"can":[214],"recover":[215],"epidemiological":[216],"trends":[217],"such":[218],"while":[225],"remaining":[226],"mathematically":[227],"computationally":[229],"tractable.":[230]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":6},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":6}],"updated_date":"2026-04-25T08:17:42.794288","created_date":"2025-10-10T00:00:00"}
