{"id":"https://openalex.org/W2955056739","doi":"https://doi.org/10.1371/journal.pcbi.1007078","title":"Disease gene prediction for molecularly uncharacterized diseases","display_name":"Disease gene prediction for molecularly uncharacterized diseases","publication_year":2019,"publication_date":"2019-07-05","ids":{"openalex":"https://openalex.org/W2955056739","doi":"https://doi.org/10.1371/journal.pcbi.1007078","mag":"2955056739","pmid":"https://pubmed.ncbi.nlm.nih.gov/31276496"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1007078","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1007078","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1007078&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1007078&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5001734551","display_name":"Juan J. C\u00e1ceres","orcid":"https://orcid.org/0000-0002-4370-2622"},"institutions":[{"id":"https://openalex.org/I184558857","display_name":"Royal Holloway University of London","ror":"https://ror.org/04g2vpn86","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I184558857"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Juan J. C\u00e1ceres","raw_affiliation_strings":["Centre for Systems and Synthetic Biology & Department of Computer Science, Royal Holloway, University of London, Egham, Surrey, United Kingdom"],"raw_orcid":"https://orcid.org/0000-0002-4370-2622","affiliations":[{"raw_affiliation_string":"Centre for Systems and Synthetic Biology & Department of Computer Science, Royal Holloway, University of London, Egham, Surrey, United Kingdom","institution_ids":["https://openalex.org/I184558857"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5030607460","display_name":"Alberto Paccanaro","orcid":"https://orcid.org/0000-0001-8059-1346"},"institutions":[{"id":"https://openalex.org/I184558857","display_name":"Royal Holloway University of London","ror":"https://ror.org/04g2vpn86","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I184558857"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Alberto Paccanaro","raw_affiliation_strings":["Centre for Systems and Synthetic Biology & Department of Computer Science, Royal Holloway, University of London, Egham, Surrey, United Kingdom"],"raw_orcid":"https://orcid.org/0000-0001-8059-1346","affiliations":[{"raw_affiliation_string":"Centre for Systems and Synthetic Biology & Department of Computer Science, Royal Holloway, University of London, Egham, Surrey, United Kingdom","institution_ids":["https://openalex.org/I184558857"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5030607460"],"corresponding_institution_ids":["https://openalex.org/I184558857"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":2.32,"has_fulltext":true,"cited_by_count":37,"citation_normalized_percentile":{"value":0.89262638,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"15","issue":"7","first_page":"e1007078","last_page":"e1007078"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.6178500056266785},{"id":"https://openalex.org/keywords/interactome","display_name":"Interactome","score":0.5758880376815796},{"id":"https://openalex.org/keywords/replicate","display_name":"Replicate","score":0.5432125926017761},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5354630351066589},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5103124976158142},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.36502930521965027},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3372875452041626},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3369627296924591},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2685006856918335},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.17437854409217834},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.10665649175643921},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.09534075856208801},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.09125837683677673}],"concepts":[{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.6178500056266785},{"id":"https://openalex.org/C9760119","wikidata":"https://www.wikidata.org/wiki/Q841382","display_name":"Interactome","level":3,"score":0.5758880376815796},{"id":"https://openalex.org/C2781162219","wikidata":"https://www.wikidata.org/wiki/Q26250693","display_name":"Replicate","level":2,"score":0.5432125926017761},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5354630351066589},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5103124976158142},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.36502930521965027},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3372875452041626},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3369627296924591},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2685006856918335},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.17437854409217834},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.10665649175643921},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.09534075856208801},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.09125837683677673}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030342","descriptor_name":"Genetic Diseases, Inborn","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":false},{"descriptor_ui":"D030342","descriptor_name":"Genetic Diseases, Inborn","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":false},{"descriptor_ui":"D030342","descriptor_name":"Genetic Diseases, Inborn","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":false},{"descriptor_ui":"D030342","descriptor_name":"Genetic Diseases, Inborn","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":false},{"descriptor_ui":"D030342","descriptor_name":"Genetic Diseases, Inborn","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D030342","descriptor_name":"Genetic Diseases, Inborn","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D030342","descriptor_name":"Genetic Diseases, Inborn","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D030342","descriptor_name":"Genetic Diseases, Inborn","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1371/journal.pcbi.1007078","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1007078","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1007078&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:31276496","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31276496","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:RePEc:plo:pcbi00:1007078","is_oa":false,"landing_page_url":"https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1007078","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},{"id":"pmh:oai:doaj.org/article:922a5da61aac4c49ad1cab49c7d05910","is_oa":true,"landing_page_url":"https://doaj.org/article/922a5da61aac4c49ad1cab49c7d05910","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 15, Iss 7, p e1007078 (2019)","raw_type":"article"},{"id":"pmh:oai:figshare.com:article/8792618","is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Disease_gene_prediction_for_molecularly_uncharacterized_diseases/8792618","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},{"id":"pmh:oai:pubmedcentral.nih.gov:6636748","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6636748","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1007078","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1007078","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1007078&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1683500639","display_name":null,"funder_award_id":"BB/K004131/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G1779027865","display_name":"Collaborative Proposal: ABI Innovation:A Graph Based Approach for the Genome Wide Prediction of Conditionaly Essential Genes","funder_award_id":"1660648","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G2739531393","display_name":null,"funder_award_id":"BB/M025047/1","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G3461577017","display_name":null,"funder_award_id":"PINV15-315","funder_id":"https://openalex.org/F4320321739","funder_display_name":"Consejo Nacional de Ciencia y Tecnolog\u00eda"},{"id":"https://openalex.org/G3571901485","display_name":null,"funder_award_id":"BB/F00964X/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G4696613433","display_name":"Development of a graph-theoretic approach to predict protein function by integrating large scale heterogeneous data","funder_award_id":"BB/F00964X/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G4964744482","display_name":null,"funder_award_id":"BB/M025047","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G5515150595","display_name":"A GPU-based high performance system for discovering consensus domain architecture and functional annotation of protein families","funder_award_id":"BB/K004131/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G5799298694","display_name":null,"funder_award_id":"PINV15-315","funder_id":"https://openalex.org/F4320328088","funder_display_name":"Consejo Nacional de Ciencia y Tecnolog\u00eda, Paraguay"},{"id":"https://openalex.org/G6294885542","display_name":null,"funder_award_id":"BB/M025047/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G6353975132","display_name":"Bilateral NSF/BIO-BBSRC - Translational landscape to link cell growth with proliferation in the root meristem","funder_award_id":"BB/M025047/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G7098739473","display_name":null,"funder_award_id":"14-INV-088","funder_id":"https://openalex.org/F4320321739","funder_display_name":"Consejo Nacional de Ciencia y Tecnolog\u00eda"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320321739","display_name":"Consejo Nacional de Ciencia y Tecnolog\u00eda","ror":"https://ror.org/059ex5q34"},{"id":"https://openalex.org/F4320328088","display_name":"Consejo Nacional de Ciencia y Tecnolog\u00eda, Paraguay","ror":"https://ror.org/00aejfc65"},{"id":"https://openalex.org/F4320332167","display_name":"Directorate for Biological Sciences","ror":"https://ror.org/001xhss06"},{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2955056739.pdf","grobid_xml":"https://content.openalex.org/works/W2955056739.grobid-xml"},"referenced_works_count":53,"referenced_works":["https://openalex.org/W1524025768","https://openalex.org/W1604929717","https://openalex.org/W1967863517","https://openalex.org/W1996530196","https://openalex.org/W2005980089","https://openalex.org/W2009405916","https://openalex.org/W2011340259","https://openalex.org/W2015631955","https://openalex.org/W2020301095","https://openalex.org/W2038122249","https://openalex.org/W2046892904","https://openalex.org/W2056782561","https://openalex.org/W2062533676","https://openalex.org/W2063993968","https://openalex.org/W2070412833","https://openalex.org/W2074395112","https://openalex.org/W2097498614","https://openalex.org/W2097532544","https://openalex.org/W2099656145","https://openalex.org/W2100251770","https://openalex.org/W2100582962","https://openalex.org/W2103017472","https://openalex.org/W2104261859","https://openalex.org/W2106631668","https://openalex.org/W2109555487","https://openalex.org/W2109757701","https://openalex.org/W2110553827","https://openalex.org/W2110684048","https://openalex.org/W2113767518","https://openalex.org/W2117024463","https://openalex.org/W2117540545","https://openalex.org/W2119220491","https://openalex.org/W2120098186","https://openalex.org/W2122863289","https://openalex.org/W2126434293","https://openalex.org/W2137394523","https://openalex.org/W2141885858","https://openalex.org/W2146925231","https://openalex.org/W2154455818","https://openalex.org/W2154654747","https://openalex.org/W2159092541","https://openalex.org/W2159767718","https://openalex.org/W2162151166","https://openalex.org/W2171631429","https://openalex.org/W2274610632","https://openalex.org/W2284713259","https://openalex.org/W2418684121","https://openalex.org/W2534390616","https://openalex.org/W2915536738","https://openalex.org/W4210400672","https://openalex.org/W4238448376","https://openalex.org/W4247861699","https://openalex.org/W6682494755"],"related_works":["https://openalex.org/W4292634579","https://openalex.org/W4254851101","https://openalex.org/W3171007296","https://openalex.org/W22115721","https://openalex.org/W2022326234","https://openalex.org/W1531941329","https://openalex.org/W2056125010","https://openalex.org/W3005984791","https://openalex.org/W2169777166","https://openalex.org/W2007507741"],"abstract_inverted_index":{"Network":[0],"medicine":[1],"approaches":[2],"have":[3,83],"been":[4],"largely":[5],"successful":[6],"at":[7,106,136,178],"increasing":[8],"our":[9,173],"knowledge":[10],"of":[11,18,36,97,145],"molecularly":[12,111,162,182],"characterized":[13,112,183],"diseases.":[14,164],"Given":[15],"a":[16,23,52,57,95],"set":[17],"disease":[19,100,147,159,193],"genes":[20,38,71,108,160,180],"associated":[21],"with":[22,46,74,127],"disease,":[24],"neighbourhood-based":[25],"methods":[26,177,200],"and":[27,93,113,121,124],"random":[28],"walkers":[29],"exploit":[30],"the":[31,34,143,146],"interactome":[32],"allowing":[33],"prediction":[35],"further":[37],"for":[39,72,109,161,181,192],"that":[40,65,152],"disease.":[41],"In":[42],"general,":[43],"however,":[44],"diseases":[45,73,115,184],"no":[47,75],"known":[48,76],"molecular":[49,77],"basis":[50],"constitute":[51],"challenge.":[53],"Here":[54],"we":[55,82],"present":[56],"novel":[58],"network":[59],"approach":[60,174],"to":[61,68,141,156],"prioritize":[62],"gene-disease":[63],"associations":[64],"is":[66,154],"able":[67,155],"also":[69,189],"predict":[70,158],"basis.":[78],"Our":[79,130],"method,":[80],"which":[81,132],"called":[84],"Cardigan":[85,153,187],"(ChARting":[86],"DIsease":[87],"Gene":[88],"AssociatioNs),":[89],"uses":[90],"semi-supervised":[91],"learning":[92],"exploits":[94],"measure":[96],"similarity":[98],"between":[99],"phenotypes.":[101],"We":[102],"evaluated":[103],"its":[104],"performance":[105],"predicting":[107,179],"both":[110,119],"uncharacterized":[114,163],"in":[116,139],"OMIM,":[117],"using":[118],"weighted":[120],"binary":[122],"interactomes,":[123],"compared":[125],"it":[126,197],"state-of-the-art":[128,176,199],"methods.":[129],"tests,":[131],"use":[133],"datasets":[134],"collected":[135],"different":[137],"points":[138],"time":[140],"replicate":[142],"dynamics":[144],"gene":[148],"discovery":[149],"process,":[150],"prove":[151],"accurately":[157],"Additionally,":[165],"standard":[166],"leave-one-out":[167],"cross":[168],"validation":[169],"tests":[170],"show":[171],"how":[172],"outperforms":[175,198],"by":[185,201],"14%-65%.":[186],"can":[188],"be":[190],"used":[191],"module":[194],"prediction,":[195],"where":[196],"87%-299%.":[202]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":9},{"year":2021,"cited_by_count":10},{"year":2020,"cited_by_count":6},{"year":2019,"cited_by_count":3}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}
