{"id":"https://openalex.org/W2944970492","doi":"https://doi.org/10.1371/journal.pcbi.1006764","title":"Establishing a computational biology flipped classroom","display_name":"Establishing a computational biology flipped classroom","publication_year":2019,"publication_date":"2019-05-23","ids":{"openalex":"https://openalex.org/W2944970492","doi":"https://doi.org/10.1371/journal.pcbi.1006764","mag":"2944970492","pmid":"https://pubmed.ncbi.nlm.nih.gov/31120882"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1006764","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1006764","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1371/journal.pcbi.1006764","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5028841180","display_name":"Phillip E. C. Compeau","orcid":"https://orcid.org/0000-0002-2772-4119"},"institutions":[{"id":"https://openalex.org/I74973139","display_name":"Carnegie Mellon University","ror":"https://ror.org/05x2bcf33","country_code":"US","type":"education","lineage":["https://openalex.org/I74973139"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Phillip Compeau","raw_affiliation_strings":["Computational Biology Department, School of Computer Science, Carnegie Mellon University, Pittsburgh, Pennsylvania, United States of America"],"affiliations":[{"raw_affiliation_string":"Computational Biology Department, School of Computer Science, Carnegie Mellon University, Pittsburgh, Pennsylvania, United States of America","institution_ids":["https://openalex.org/I74973139"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5028841180"],"corresponding_institution_ids":["https://openalex.org/I74973139"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":7.884,"has_fulltext":false,"cited_by_count":22,"citation_normalized_percentile":{"value":0.9713809,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"15","issue":"5","first_page":"e1006764","last_page":"e1006764"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11526","display_name":"Innovative Teaching Methods","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/3304","display_name":"Education"},"field":{"id":"https://openalex.org/fields/33","display_name":"Social Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11526","display_name":"Innovative Teaching Methods","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/3304","display_name":"Education"},"field":{"id":"https://openalex.org/fields/33","display_name":"Social Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T11283","display_name":"Experimental Learning in Engineering","score":0.9934999942779541,"subfield":{"id":"https://openalex.org/subfields/2214","display_name":"Media Technology"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9886000156402588,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/flipped-classroom","display_name":"Flipped classroom","score":0.8293032050132751},{"id":"https://openalex.org/keywords/mathematics-education","display_name":"Mathematics education","score":0.6167681217193604},{"id":"https://openalex.org/keywords/constructive","display_name":"Constructive","score":0.6112838387489319},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5742630362510681},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.28217455744743347},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.09711292386054993},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.08494532108306885}],"concepts":[{"id":"https://openalex.org/C2778156053","wikidata":"https://www.wikidata.org/wiki/Q80267","display_name":"Flipped classroom","level":2,"score":0.8293032050132751},{"id":"https://openalex.org/C145420912","wikidata":"https://www.wikidata.org/wiki/Q853077","display_name":"Mathematics education","level":1,"score":0.6167681217193604},{"id":"https://openalex.org/C2778701210","wikidata":"https://www.wikidata.org/wiki/Q28130034","display_name":"Constructive","level":3,"score":0.6112838387489319},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5742630362510681},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.28217455744743347},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.09711292386054993},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.08494532108306885}],"mesh":[{"descriptor_ui":"D003479","descriptor_name":"Curriculum","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003479","descriptor_name":"Curriculum","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003479","descriptor_name":"Curriculum","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004493","descriptor_name":"Education","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D004493","descriptor_name":"Education","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D004493","descriptor_name":"Education","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007858","descriptor_name":"Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007858","descriptor_name":"Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007858","descriptor_name":"Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013334","descriptor_name":"Students","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013334","descriptor_name":"Students","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013334","descriptor_name":"Students","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018794","descriptor_name":"Problem-Based Learning","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D018794","descriptor_name":"Problem-Based Learning","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D018794","descriptor_name":"Problem-Based Learning","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000193","qualifier_name":"education","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000193","qualifier_name":"education","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000193","qualifier_name":"education","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1371/journal.pcbi.1006764","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1006764","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:31120882","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31120882","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:doaj.org/article:f483255949d646d59d7cb807500fdbe6","is_oa":true,"landing_page_url":"https://doaj.org/article/f483255949d646d59d7cb807500fdbe6","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 15, Iss 5, p e1006764 (2019)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:6532840","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6532840","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1006764","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1006764","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Quality Education","score":0.8500000238418579,"id":"https://metadata.un.org/sdg/4"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320332603","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":18,"referenced_works":["https://openalex.org/W68630991","https://openalex.org/W1598000392","https://openalex.org/W1806940748","https://openalex.org/W2001674944","https://openalex.org/W2010593734","https://openalex.org/W2040118905","https://openalex.org/W2093126594","https://openalex.org/W2116817443","https://openalex.org/W2170620902","https://openalex.org/W2172010324","https://openalex.org/W2229908198","https://openalex.org/W2296348267","https://openalex.org/W2306686872","https://openalex.org/W2735138488","https://openalex.org/W2755450056","https://openalex.org/W6635857134","https://openalex.org/W6638266109","https://openalex.org/W6698356842"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2726155712","https://openalex.org/W4311883357","https://openalex.org/W94411513","https://openalex.org/W2390279801","https://openalex.org/W2377770720","https://openalex.org/W2113626999","https://openalex.org/W2358668433","https://openalex.org/W160889949","https://openalex.org/W2364696089"],"abstract_inverted_index":{"In":[0],"a":[1,10,35,40,64,73,86,91],"flipped":[2,32,50,87],"classroom,":[3],"students":[4],"complete":[5],"automated":[6],"modules":[7],"to":[8,20,23,61],"replace":[9],"traditional":[11],"lecture,":[12],"allowing":[13],"the":[14,18,31,47,78,82,98],"time":[15],"devoted":[16,22],"for":[17,38],"lecture":[19],"be":[21],"constructive":[24],"tasks":[25],"reinforcing":[26],"student":[27],"knowledge.":[28],"Yet":[29],"although":[30],"classroom":[33,65],"offers":[34],"compelling":[36],"approach":[37],"fostering":[39],"constructivist,":[41],"student-centric":[42],"learning":[43],"environment,":[44],"research":[45],"on":[46],"efficacy":[48],"of":[49,89,97],"classes":[51],"has":[52,84],"been":[53],"mixed.":[54],"For":[55],"that":[56],"matter,":[57],"is":[58],"it":[59],"possible":[60],"successfully":[62],"flip":[63],"in":[66],"an":[67],"advanced,":[68],"heavily":[69],"specialized":[70],"course":[71,92],"like":[72],"bioinformatics":[74],"algorithms":[75],"course?":[76],"Over":[77],"past":[79],"several":[80],"years,":[81],"author":[83],"implemented":[85],"version":[88],"such":[90],"and":[93,100],"will":[94],"discuss":[95],"some":[96],"successes":[99],"pitfalls":[101],"encountered.":[102]},"counts_by_year":[{"year":2025,"cited_by_count":5},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":6},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":1}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}
