{"id":"https://openalex.org/W2623149690","doi":"https://doi.org/10.1371/journal.pcbi.1006079","title":"Biobeam\u2014Multiplexed wave-optical simulations of light-sheet microscopy","display_name":"Biobeam\u2014Multiplexed wave-optical simulations of light-sheet microscopy","publication_year":2018,"publication_date":"2018-04-13","ids":{"openalex":"https://openalex.org/W2623149690","doi":"https://doi.org/10.1371/journal.pcbi.1006079","mag":"2623149690","pmid":"https://pubmed.ncbi.nlm.nih.gov/29652879"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1006079","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1006079","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1006079&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["arxiv","crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1006079&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5001563470","display_name":"Martin Weigert","orcid":"https://orcid.org/0000-0002-7780-9057"},"institutions":[{"id":"https://openalex.org/I4210148197","display_name":"Center for Systems Biology Dresden","ror":"https://ror.org/05hrn3e05","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I149899117","https://openalex.org/I4210111875","https://openalex.org/I4210148197","https://openalex.org/I4210159854","https://openalex.org/I78650965"]},{"id":"https://openalex.org/I4210159854","display_name":"Max Planck Institute of Molecular Cell Biology and Genetics","ror":"https://ror.org/05b8d3w18","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210159854"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Martin Weigert","raw_affiliation_strings":["Center for Systems Biology Dresden, Dresden, Germany","Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Systems Biology Dresden, Dresden, Germany","institution_ids":["https://openalex.org/I4210148197"]},{"raw_affiliation_string":"Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany","institution_ids":["https://openalex.org/I4210159854"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053179532","display_name":"Kaushikaram Subramanian","orcid":"https://orcid.org/0000-0002-9050-5672"},"institutions":[{"id":"https://openalex.org/I4210148197","display_name":"Center for Systems Biology Dresden","ror":"https://ror.org/05hrn3e05","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I149899117","https://openalex.org/I4210111875","https://openalex.org/I4210148197","https://openalex.org/I4210159854","https://openalex.org/I78650965"]},{"id":"https://openalex.org/I4210159854","display_name":"Max Planck Institute of Molecular Cell Biology and Genetics","ror":"https://ror.org/05b8d3w18","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210159854"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Kaushikaram Subramanian","raw_affiliation_strings":["Center for Systems Biology Dresden, Dresden, Germany","Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany"],"raw_orcid":"https://orcid.org/0000-0002-9050-5672","affiliations":[{"raw_affiliation_string":"Center for Systems Biology Dresden, Dresden, Germany","institution_ids":["https://openalex.org/I4210148197"]},{"raw_affiliation_string":"Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany","institution_ids":["https://openalex.org/I4210159854"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040081584","display_name":"Sebastian T. Bundschuh","orcid":null},"institutions":[{"id":"https://openalex.org/I4210159854","display_name":"Max Planck Institute of Molecular Cell Biology and Genetics","ror":"https://ror.org/05b8d3w18","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210159854"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Sebastian T. Bundschuh","raw_affiliation_strings":["Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany","institution_ids":["https://openalex.org/I4210159854"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068657716","display_name":"Eugene W. Myers","orcid":"https://orcid.org/0000-0002-6580-7839"},"institutions":[{"id":"https://openalex.org/I4210148197","display_name":"Center for Systems Biology Dresden","ror":"https://ror.org/05hrn3e05","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I149899117","https://openalex.org/I4210111875","https://openalex.org/I4210148197","https://openalex.org/I4210159854","https://openalex.org/I78650965"]},{"id":"https://openalex.org/I4210159854","display_name":"Max Planck Institute of Molecular Cell Biology and Genetics","ror":"https://ror.org/05b8d3w18","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210159854"]},{"id":"https://openalex.org/I78650965","display_name":"Technische Universit\u00e4t Dresden","ror":"https://ror.org/042aqky30","country_code":"DE","type":"education","lineage":["https://openalex.org/I78650965"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Eugene W. Myers","raw_affiliation_strings":["Center for Systems Biology Dresden, Dresden, Germany","Faculty of Computer Science, Technische Universit\u00e4t Dresden, Germany","Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany"],"raw_orcid":"https://orcid.org/0000-0002-6580-7839","affiliations":[{"raw_affiliation_string":"Center for Systems Biology Dresden, Dresden, Germany","institution_ids":["https://openalex.org/I4210148197"]},{"raw_affiliation_string":"Faculty of Computer Science, Technische Universit\u00e4t Dresden, Germany","institution_ids":["https://openalex.org/I78650965"]},{"raw_affiliation_string":"Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany","institution_ids":["https://openalex.org/I4210159854"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5017342485","display_name":"Moritz Kreysing","orcid":"https://orcid.org/0000-0001-7432-3871"},"institutions":[{"id":"https://openalex.org/I4210148197","display_name":"Center for Systems Biology Dresden","ror":"https://ror.org/05hrn3e05","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I149899117","https://openalex.org/I4210111875","https://openalex.org/I4210148197","https://openalex.org/I4210159854","https://openalex.org/I78650965"]},{"id":"https://openalex.org/I4210159854","display_name":"Max Planck Institute of Molecular Cell Biology and Genetics","ror":"https://ror.org/05b8d3w18","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210159854"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Moritz Kreysing","raw_affiliation_strings":["Center for Systems Biology Dresden, Dresden, Germany","Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany"],"raw_orcid":"https://orcid.org/0000-0001-7432-3871","affiliations":[{"raw_affiliation_string":"Center for Systems Biology Dresden, Dresden, Germany","institution_ids":["https://openalex.org/I4210148197"]},{"raw_affiliation_string":"Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany","institution_ids":["https://openalex.org/I4210159854"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5017342485"],"corresponding_institution_ids":["https://openalex.org/I4210148197","https://openalex.org/I4210159854"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":5.3965,"has_fulltext":true,"cited_by_count":32,"citation_normalized_percentile":{"value":0.95623875,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"14","issue":"4","first_page":"e1006079","last_page":"e1006079"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10540","display_name":"Advanced Fluorescence Microscopy Techniques","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10540","display_name":"Advanced Fluorescence Microscopy Techniques","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11897","display_name":"Digital Holography and Microscopy","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/3107","display_name":"Atomic and Molecular Physics, and Optics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11569","display_name":"Optical Coherence Tomography Applications","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/optics","display_name":"Optics","score":0.6955335736274719},{"id":"https://openalex.org/keywords/diffraction","display_name":"Diffraction","score":0.6446226239204407},{"id":"https://openalex.org/keywords/optical-microscope","display_name":"Optical microscope","score":0.6337775588035583},{"id":"https://openalex.org/keywords/microscopy","display_name":"Microscopy","score":0.6097894906997681},{"id":"https://openalex.org/keywords/point-spread-function","display_name":"Point spread function","score":0.5331816673278809},{"id":"https://openalex.org/keywords/light-sheet-fluorescence-microscopy","display_name":"Light sheet fluorescence microscopy","score":0.5312960743904114},{"id":"https://openalex.org/keywords/multiplexing","display_name":"Multiplexing","score":0.4852862060070038},{"id":"https://openalex.org/keywords/microscope","display_name":"Microscope","score":0.45085543394088745},{"id":"https://openalex.org/keywords/optical-sectioning","display_name":"Optical sectioning","score":0.4385346472263336},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.41883736848831177},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.4077723026275635},{"id":"https://openalex.org/keywords/telecommunications","display_name":"Telecommunications","score":0.1052829921245575},{"id":"https://openalex.org/keywords/scanning-electron-microscope","display_name":"Scanning electron microscope","score":0.09740692377090454},{"id":"https://openalex.org/keywords/scanning-confocal-electron-microscopy","display_name":"Scanning confocal electron microscopy","score":0.09587129950523376}],"concepts":[{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.6955335736274719},{"id":"https://openalex.org/C207114421","wikidata":"https://www.wikidata.org/wiki/Q133900","display_name":"Diffraction","level":2,"score":0.6446226239204407},{"id":"https://openalex.org/C77017923","wikidata":"https://www.wikidata.org/wiki/Q912313","display_name":"Optical microscope","level":3,"score":0.6337775588035583},{"id":"https://openalex.org/C147080431","wikidata":"https://www.wikidata.org/wiki/Q1074953","display_name":"Microscopy","level":2,"score":0.6097894906997681},{"id":"https://openalex.org/C69179731","wikidata":"https://www.wikidata.org/wiki/Q510427","display_name":"Point spread function","level":2,"score":0.5331816673278809},{"id":"https://openalex.org/C113976765","wikidata":"https://www.wikidata.org/wiki/Q1823502","display_name":"Light sheet fluorescence microscopy","level":4,"score":0.5312960743904114},{"id":"https://openalex.org/C19275194","wikidata":"https://www.wikidata.org/wiki/Q222903","display_name":"Multiplexing","level":2,"score":0.4852862060070038},{"id":"https://openalex.org/C67649825","wikidata":"https://www.wikidata.org/wiki/Q196538","display_name":"Microscope","level":2,"score":0.45085543394088745},{"id":"https://openalex.org/C20446124","wikidata":"https://www.wikidata.org/wiki/Q7098895","display_name":"Optical sectioning","level":3,"score":0.4385346472263336},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.41883736848831177},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.4077723026275635},{"id":"https://openalex.org/C76155785","wikidata":"https://www.wikidata.org/wiki/Q418","display_name":"Telecommunications","level":1,"score":0.1052829921245575},{"id":"https://openalex.org/C26771246","wikidata":"https://www.wikidata.org/wiki/Q321095","display_name":"Scanning electron microscope","level":2,"score":0.09740692377090454},{"id":"https://openalex.org/C187921700","wikidata":"https://www.wikidata.org/wiki/Q7430074","display_name":"Scanning confocal electron microscopy","level":3,"score":0.09587129950523376}],"mesh":[{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007089","descriptor_name":"Image Enhancement","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007089","descriptor_name":"Image Enhancement","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007089","descriptor_name":"Image Enhancement","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D008027","descriptor_name":"Light","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008027","descriptor_name":"Light","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008027","descriptor_name":"Light","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008856","descriptor_name":"Microscopy, Fluorescence","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D008856","descriptor_name":"Microscopy, Fluorescence","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D008856","descriptor_name":"Microscopy, Fluorescence","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D008856","descriptor_name":"Microscopy, Fluorescence","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D008856","descriptor_name":"Microscopy, Fluorescence","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D008856","descriptor_name":"Microscopy, Fluorescence","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D012542","descriptor_name":"Scattering, Radiation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012542","descriptor_name":"Scattering, Radiation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012542","descriptor_name":"Scattering, Radiation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D055620","descriptor_name":"Optical Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055620","descriptor_name":"Optical Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055620","descriptor_name":"Optical Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":8,"locations":[{"id":"doi:10.1371/journal.pcbi.1006079","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1006079","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1006079&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:29652879","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29652879","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:arXiv.org:1706.02261","is_oa":true,"landing_page_url":"http://arxiv.org/abs/1706.02261","pdf_url":"https://arxiv.org/pdf/1706.02261","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},{"id":"pmh:oai:RePEc:plo:pcbi00:1006079","is_oa":false,"landing_page_url":"https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1006079","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},{"id":"pmh:oai:doaj.org/article:f537b1a4003b4813bf23f4d0220904cb","is_oa":true,"landing_page_url":"https://doaj.org/article/f537b1a4003b4813bf23f4d0220904cb","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 14, Iss 4, p e1006079 (2018)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:4856411","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5898703","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:figshare.com:article/6140069","is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Biobeam_Multiplexed_wave-optical_simulations_of_light-sheet_microscopy/6140069","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},{"id":"pmh:oai:pure.mpg.de:item_3058791","is_oa":false,"landing_page_url":"http://hdl.handle.net/21.11116/0000-0003-F6BF-1","pdf_url":null,"source":{"id":"https://openalex.org/S4306400654","display_name":"MPG.PuRe (Max Planck Society)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I149899117","host_organization_name":"Max Planck Society","host_organization_lineage":["https://openalex.org/I149899117"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS computational biology","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1006079","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1006079","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1006079&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G7854166296","display_name":null,"funder_award_id":"031L0044","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"}],"funders":[{"id":"https://openalex.org/F4320321114","display_name":"Bundesministerium f\u00fcr Bildung und Forschung","ror":"https://ror.org/04pz7b180"},{"id":"https://openalex.org/F4320322434","display_name":"Max-Planck-Gesellschaft","ror":"https://ror.org/01hhn8329"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2623149690.pdf","grobid_xml":"https://content.openalex.org/works/W2623149690.grobid-xml"},"referenced_works_count":41,"referenced_works":["https://openalex.org/W94301298","https://openalex.org/W160678117","https://openalex.org/W1726986560","https://openalex.org/W1912609581","https://openalex.org/W1968127700","https://openalex.org/W1970884399","https://openalex.org/W1975377245","https://openalex.org/W1985462363","https://openalex.org/W1994574914","https://openalex.org/W1998528125","https://openalex.org/W2000558985","https://openalex.org/W2003224117","https://openalex.org/W2017252663","https://openalex.org/W2022560617","https://openalex.org/W2030224529","https://openalex.org/W2032105712","https://openalex.org/W2055680969","https://openalex.org/W2057079101","https://openalex.org/W2073731654","https://openalex.org/W2079177770","https://openalex.org/W2094643072","https://openalex.org/W2097683070","https://openalex.org/W2097689438","https://openalex.org/W2133865602","https://openalex.org/W2153126824","https://openalex.org/W2170028951","https://openalex.org/W2235248450","https://openalex.org/W2255182659","https://openalex.org/W2270609213","https://openalex.org/W2279851379","https://openalex.org/W2291672038","https://openalex.org/W2479576260","https://openalex.org/W2559756885","https://openalex.org/W2592302178","https://openalex.org/W2598427385","https://openalex.org/W2745184596","https://openalex.org/W2765243921","https://openalex.org/W2949313867","https://openalex.org/W4241300192","https://openalex.org/W4242396837","https://openalex.org/W6813168356"],"related_works":["https://openalex.org/W1930341357","https://openalex.org/W2979590197","https://openalex.org/W115631233","https://openalex.org/W2098681947","https://openalex.org/W2950764594","https://openalex.org/W2343341536","https://openalex.org/W4297897531","https://openalex.org/W2323541887","https://openalex.org/W4205774845","https://openalex.org/W2329527043"],"abstract_inverted_index":{"Sample-induced":[0],"image-degradation":[1],"remains":[2],"an":[3,14],"intricate":[4],"wave-optical":[5,36,59],"problem":[6],"in":[7,64],"light-sheet":[8,23,65],"microscopy.":[9],"Here":[10],"we":[11],"present":[12],"biobeam,":[13],"open-source":[15],"software":[16],"package":[17],"that":[18],"enables":[19],"simulation":[20],"of":[21,38,46],"operational":[22],"microscopes":[24],"by":[25],"combining":[26],"data":[27],"from":[28],"105-106":[29],"multiplexed":[30],"and":[31,57,61],"GPU-accelerated":[32],"point-spread-function":[33],"calculations.":[34],"The":[35],"nature":[37],"these":[39],"simulations":[40],"leads":[41],"to":[42],"the":[43],"faithful":[44],"reproduction":[45],"spatially":[47],"varying":[48],"aberrations,":[49],"diffraction":[50],"artifacts,":[51],"geometric":[52],"image":[53],"distortions,":[54],"adaptive":[55],"optics,":[56],"emergent":[58],"phenomena,":[60],"renders":[62],"image-formation":[63],"microscopy":[66],"computationally":[67],"tractable.":[68]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":6},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":11},{"year":2018,"cited_by_count":1}],"updated_date":"2026-05-06T08:25:59.206177","created_date":"2025-10-10T00:00:00"}