{"id":"https://openalex.org/W2567711327","doi":"https://doi.org/10.1371/journal.pcbi.1005253","title":"Competing Mechanistic Hypotheses of Acetaminophen-Induced Hepatotoxicity Challenged by Virtual Experiments","display_name":"Competing Mechanistic Hypotheses of Acetaminophen-Induced Hepatotoxicity Challenged by Virtual Experiments","publication_year":2016,"publication_date":"2016-12-16","ids":{"openalex":"https://openalex.org/W2567711327","doi":"https://doi.org/10.1371/journal.pcbi.1005253","mag":"2567711327","pmid":"https://pubmed.ncbi.nlm.nih.gov/27984590"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1005253","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1005253","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1005253&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1005253&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5031473080","display_name":"Andrew Smith","orcid":"https://orcid.org/0000-0001-6848-0192"},"institutions":[{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Andrew K. Smith","raw_affiliation_strings":["Bioengineering and Therapeutic Sciences, University of California, San Francisco, San Francisco, CA, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioengineering and Therapeutic Sciences, University of California, San Francisco, San Francisco, CA, United States of America","institution_ids":["https://openalex.org/I180670191"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055746866","display_name":"Brenden K. Petersen","orcid":"https://orcid.org/0000-0002-1841-3888"},"institutions":[{"id":"https://openalex.org/I19620478","display_name":"Graduate Theological Union","ror":"https://ror.org/00xs48965","country_code":"US","type":"other","lineage":["https://openalex.org/I19620478"]},{"id":"https://openalex.org/I95457486","display_name":"University of California, Berkeley","ror":"https://ror.org/01an7q238","country_code":"US","type":"education","lineage":["https://openalex.org/I95457486"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Brenden K. Petersen","raw_affiliation_strings":["UCSF/UCB Joint Graduate Group in Bioengineering, University of California, Berkeley, Berkeley, CA, United States of America"],"raw_orcid":"https://orcid.org/0000-0002-1841-3888","affiliations":[{"raw_affiliation_string":"UCSF/UCB Joint Graduate Group in Bioengineering, University of California, Berkeley, Berkeley, CA, United States of America","institution_ids":["https://openalex.org/I19620478","https://openalex.org/I95457486"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015627205","display_name":"Glen E. P. Ropella","orcid":"https://orcid.org/0000-0002-6031-105X"},"institutions":[{"id":"https://openalex.org/I4210114883","display_name":"Tempus Labs (United States)","ror":"https://ror.org/01gbymr57","country_code":"US","type":"company","lineage":["https://openalex.org/I4210114883"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Glen E. P. Ropella","raw_affiliation_strings":["Tempus Dictum, Inc., Milwaukie, OR, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Tempus Dictum, Inc., Milwaukie, OR, United States of America","institution_ids":["https://openalex.org/I4210114883"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089164832","display_name":"Ryan Kennedy","orcid":"https://orcid.org/0000-0003-2146-4026"},"institutions":[{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ryan C. Kennedy","raw_affiliation_strings":["Bioengineering and Therapeutic Sciences, University of California, San Francisco, San Francisco, CA, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioengineering and Therapeutic Sciences, University of California, San Francisco, San Francisco, CA, United States of America","institution_ids":["https://openalex.org/I180670191"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043356624","display_name":"Neil Kaplowitz","orcid":"https://orcid.org/0000-0002-9424-393X"},"institutions":[{"id":"https://openalex.org/I1174212","display_name":"University of Southern California","ror":"https://ror.org/03taz7m60","country_code":"US","type":"education","lineage":["https://openalex.org/I1174212"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Neil Kaplowitz","raw_affiliation_strings":["Division of Gastrointestinal and Liver Diseases, Department of Medicine, Keck School of Medicine, University of Southern California, Los Angeles, CA, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Gastrointestinal and Liver Diseases, Department of Medicine, Keck School of Medicine, University of Southern California, Los Angeles, CA, United States of America","institution_ids":["https://openalex.org/I1174212"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029888033","display_name":"Murad Ookhtens","orcid":null},"institutions":[{"id":"https://openalex.org/I1174212","display_name":"University of Southern California","ror":"https://ror.org/03taz7m60","country_code":"US","type":"education","lineage":["https://openalex.org/I1174212"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Murad Ookhtens","raw_affiliation_strings":["Division of Gastrointestinal and Liver Diseases, Department of Medicine, Keck School of Medicine, University of Southern California, Los Angeles, CA, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Gastrointestinal and Liver Diseases, Department of Medicine, Keck School of Medicine, University of Southern California, Los Angeles, CA, United States of America","institution_ids":["https://openalex.org/I1174212"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5001335754","display_name":"C. Anthony Hunt","orcid":"https://orcid.org/0000-0001-9372-6860"},"institutions":[{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"C. Anthony Hunt","raw_affiliation_strings":["Bioengineering and Therapeutic Sciences, University of California, San Francisco, San Francisco, CA, United States of America"],"raw_orcid":"https://orcid.org/0000-0001-9372-6860","affiliations":[{"raw_affiliation_string":"Bioengineering and Therapeutic Sciences, University of California, San Francisco, San Francisco, CA, United States of America","institution_ids":["https://openalex.org/I180670191"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5001335754"],"corresponding_institution_ids":["https://openalex.org/I180670191"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":5.5973,"has_fulltext":true,"cited_by_count":29,"citation_normalized_percentile":{"value":0.95242755,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"12","issue":"12","first_page":"e1005253","last_page":"e1005253"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11465","display_name":"Drug-Induced Hepatotoxicity and Protection","score":1.0,"subfield":{"id":"https://openalex.org/subfields/3004","display_name":"Pharmacology"},"field":{"id":"https://openalex.org/fields/30","display_name":"Pharmacology, Toxicology and Pharmaceutics"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11465","display_name":"Drug-Induced Hepatotoxicity and Protection","score":1.0,"subfield":{"id":"https://openalex.org/subfields/3004","display_name":"Pharmacology"},"field":{"id":"https://openalex.org/fields/30","display_name":"Pharmacology, Toxicology and Pharmaceutics"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10966","display_name":"Liver physiology and pathology","score":0.9950000047683716,"subfield":{"id":"https://openalex.org/subfields/2721","display_name":"Hepatology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10375","display_name":"Pharmacogenetics and Drug Metabolism","score":0.991100013256073,"subfield":{"id":"https://openalex.org/subfields/3004","display_name":"Pharmacology"},"field":{"id":"https://openalex.org/fields/30","display_name":"Pharmacology, Toxicology and Pharmaceutics"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/mechanism","display_name":"Mechanism (biology)","score":0.7643868327140808},{"id":"https://openalex.org/keywords/lobules-of-liver","display_name":"Lobules of liver","score":0.6179636716842651},{"id":"https://openalex.org/keywords/acetaminophen","display_name":"Acetaminophen","score":0.6040235161781311},{"id":"https://openalex.org/keywords/phenomenon","display_name":"Phenomenon","score":0.521757185459137},{"id":"https://openalex.org/keywords/metabolite","display_name":"Metabolite","score":0.4459187686443329},{"id":"https://openalex.org/keywords/liver-injury","display_name":"Liver injury","score":0.41552823781967163},{"id":"https://openalex.org/keywords/pharmacology","display_name":"Pharmacology","score":0.3672146797180176},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3534351885318756},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.34997671842575073},{"id":"https://openalex.org/keywords/neuroscience","display_name":"Neuroscience","score":0.3260859251022339},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.3251686990261078},{"id":"https://openalex.org/keywords/cell-biology","display_name":"Cell biology","score":0.32001352310180664},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.24468928575515747},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.1682106852531433},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.14724519848823547}],"concepts":[{"id":"https://openalex.org/C89611455","wikidata":"https://www.wikidata.org/wiki/Q6804646","display_name":"Mechanism (biology)","level":2,"score":0.7643868327140808},{"id":"https://openalex.org/C57322979","wikidata":"https://www.wikidata.org/wiki/Q11611496","display_name":"Lobules of liver","level":2,"score":0.6179636716842651},{"id":"https://openalex.org/C2778722691","wikidata":"https://www.wikidata.org/wiki/Q57055","display_name":"Acetaminophen","level":2,"score":0.6040235161781311},{"id":"https://openalex.org/C50335755","wikidata":"https://www.wikidata.org/wiki/Q483247","display_name":"Phenomenon","level":2,"score":0.521757185459137},{"id":"https://openalex.org/C2777477808","wikidata":"https://www.wikidata.org/wiki/Q407595","display_name":"Metabolite","level":2,"score":0.4459187686443329},{"id":"https://openalex.org/C2776637226","wikidata":"https://www.wikidata.org/wiki/Q6658207","display_name":"Liver injury","level":2,"score":0.41552823781967163},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.3672146797180176},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3534351885318756},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.34997671842575073},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.3260859251022339},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.3251686990261078},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.32001352310180664},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.24468928575515747},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.1682106852531433},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.14724519848823547},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000082","descriptor_name":"Acetaminophen","qualifier_ui":"Q000633","qualifier_name":"toxicity","is_major_topic":false},{"descriptor_ui":"D000082","descriptor_name":"Acetaminophen","qualifier_ui":"Q000633","qualifier_name":"toxicity","is_major_topic":false},{"descriptor_ui":"D000082","descriptor_name":"Acetaminophen","qualifier_ui":"Q000633","qualifier_name":"toxicity","is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008099","descriptor_name":"Liver","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":true},{"descriptor_ui":"D008099","descriptor_name":"Liver","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":true},{"descriptor_ui":"D008099","descriptor_name":"Liver","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":true},{"descriptor_ui":"D008099","descriptor_name":"Liver","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D008099","descriptor_name":"Liver","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D008099","descriptor_name":"Liver","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D008099","descriptor_name":"Liver","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D008099","descriptor_name":"Liver","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D008099","descriptor_name":"Liver","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D008099","descriptor_name":"Liver","qualifier_ui":"Q000503","qualifier_name":"physiopathology","is_major_topic":true},{"descriptor_ui":"D008099","descriptor_name":"Liver","qualifier_ui":"Q000503","qualifier_name":"physiopathology","is_major_topic":true},{"descriptor_ui":"D008099","descriptor_name":"Liver","qualifier_ui":"Q000503","qualifier_name":"physiopathology","is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056486","descriptor_name":"Chemical and Drug Induced Liver Injury","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D056486","descriptor_name":"Chemical and Drug Induced Liver Injury","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D056486","descriptor_name":"Chemical and Drug Induced Liver Injury","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D056486","descriptor_name":"Chemical and Drug Induced Liver Injury","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D056486","descriptor_name":"Chemical and Drug Induced Liver Injury","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D056486","descriptor_name":"Chemical and Drug Induced Liver Injury","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D056486","descriptor_name":"Chemical and Drug Induced Liver Injury","qualifier_ui":"Q000503","qualifier_name":"physiopathology","is_major_topic":true},{"descriptor_ui":"D056486","descriptor_name":"Chemical and Drug Induced Liver Injury","qualifier_ui":"Q000503","qualifier_name":"physiopathology","is_major_topic":true},{"descriptor_ui":"D056486","descriptor_name":"Chemical and Drug Induced Liver Injury","qualifier_ui":"Q000503","qualifier_name":"physiopathology","is_major_topic":true}],"locations_count":8,"locations":[{"id":"doi:10.1371/journal.pcbi.1005253","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1005253","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1005253&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:27984590","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27984590","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:ark:/13030/qt8q8604gm","is_oa":false,"landing_page_url":null,"pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null},{"id":"pmh:oai:RePEc:plo:pcbi00:1005253","is_oa":false,"landing_page_url":"https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1005253","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},{"id":"pmh:oai:doaj.org/article:ec77594be4d345e2beb4134ee09e4108","is_oa":true,"landing_page_url":"https://doaj.org/article/ec77594be4d345e2beb4134ee09e4108","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 12, Iss 12, p e1005253 (2016)","raw_type":"article"},{"id":"pmh:oai:escholarship.org/ark:/13030/qt8q8604gm","is_oa":false,"landing_page_url":"https://escholarship.org/uc/item/8q8604gm","pdf_url":null,"source":{"id":"https://openalex.org/S4306400115","display_name":"eScholarship (California Digital Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2801248553","host_organization_name":"California Digital Library","host_organization_lineage":["https://openalex.org/I2801248553"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS computational biology, vol 12, iss 12","raw_type":"article"},{"id":"pmh:oai:figshare.com:article/4477001","is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Competing_Mechanistic_Hypotheses_of_Acetaminophen-Induced_Hepatotoxicity_Challenged_by_Virtual_Experiments/4477001","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},{"id":"pmh:oai:pubmedcentral.nih.gov:5161305","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5161305","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1005253","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1005253","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1005253&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.8500000238418579,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"awards":[{"id":"https://openalex.org/G3470888984","display_name":null,"funder_award_id":"5R01DK067215","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G3765276330","display_name":null,"funder_award_id":"2P30DK48522","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320309411","display_name":"University of California Berkeley","ror":"https://ror.org/01an7q238"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320332622","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2567711327.pdf","grobid_xml":"https://content.openalex.org/works/W2567711327.grobid-xml"},"referenced_works_count":40,"referenced_works":["https://openalex.org/W136227278","https://openalex.org/W191029197","https://openalex.org/W1956427901","https://openalex.org/W1967239625","https://openalex.org/W1967261220","https://openalex.org/W1973021910","https://openalex.org/W2000066924","https://openalex.org/W2003564729","https://openalex.org/W2008566763","https://openalex.org/W2013232839","https://openalex.org/W2026239829","https://openalex.org/W2029867647","https://openalex.org/W2032149167","https://openalex.org/W2064076054","https://openalex.org/W2074545478","https://openalex.org/W2091298068","https://openalex.org/W2100532372","https://openalex.org/W2107947237","https://openalex.org/W2113136638","https://openalex.org/W2121905328","https://openalex.org/W2134520937","https://openalex.org/W2139969518","https://openalex.org/W2144244247","https://openalex.org/W2148170212","https://openalex.org/W2151450092","https://openalex.org/W2153906060","https://openalex.org/W2154514556","https://openalex.org/W2159748585","https://openalex.org/W2160820250","https://openalex.org/W2160896286","https://openalex.org/W2161585316","https://openalex.org/W2163851442","https://openalex.org/W2183796170","https://openalex.org/W2200847181","https://openalex.org/W2227122201","https://openalex.org/W2248908668","https://openalex.org/W2395913867","https://openalex.org/W2460125795","https://openalex.org/W2529741226","https://openalex.org/W3037613880"],"related_works":["https://openalex.org/W2521903434","https://openalex.org/W1753739957","https://openalex.org/W2085913165","https://openalex.org/W4300450609","https://openalex.org/W2379672754","https://openalex.org/W4386931570","https://openalex.org/W2261954172","https://openalex.org/W2898766851","https://openalex.org/W102358633","https://openalex.org/W3010145749"],"abstract_inverted_index":{"Acetaminophen-induced":[0],"liver":[1,10],"injury":[2,11],"in":[3,12,44,71,101,161,176,192,204,250,268],"mice":[4,45,102],"is":[5,25,46,103],"a":[6,26,187,238,279],"model":[7],"for":[8,16,30,89,146,264],"drug-induced":[9],"humans.":[13],"A":[14],"precondition":[15],"improved":[17],"strategies":[18],"to":[19,37,51,87,135,153,163,199,218],"disrupt":[20],"and/or":[21],"reverse":[22],"the":[23,52,95,125,155,177,193,205,212,220,231,257,265],"damage":[24,202],"credible":[27],"explanatory":[28,61],"mechanism":[29,62,236,259],"how":[31],"toxicity":[32],"phenomena":[33],"emerge":[34],"and":[35,57,84,112,149,182,196],"converge":[36],"cause":[38],"hepatic":[39,78],"necrosis.":[40],"The":[41,234],"Target":[42,156,221,232],"Phenomenon":[43],"that":[47,67,90,94,99,254],"necrosis":[48,270],"begins":[49],"adjacent":[50],"lobule's":[53],"central":[54],"vein":[55],"(CV)":[56],"progresses":[58],"outward.":[59],"An":[60],"remains":[63],"elusive.":[64],"Evidence":[65],"supports":[66],"location":[68],"dependent":[69,138],"differences":[70],"NAPQI":[72],"(the":[73],"reactive":[74],"metabolite)":[75],"formation":[76],"within":[77,124],"lobules":[79],"(NAPQI":[80],"zonation)":[81],"are":[82],"necessary":[83],"sufficient":[85],"prerequisites":[86],"account":[88],"phenomenon.":[91],"We":[92,158,180,252],"call":[93],"NZ-mechanism":[96,141,216],"hypothesis.":[97],"Challenging":[98],"hypothesis":[100],"infeasible":[104],"because":[105],"1)":[106,186],"influential":[107],"variables":[108],"cannot":[109],"be":[110],"controlled,":[111],"2)":[113,197],"it":[114],"would":[115],"require":[116],"sequential":[117],"intracellular":[118],"measurements":[119],"at":[120,166],"different":[121],"lobular":[122],"locations":[123],"same":[126],"mouse.":[127],"Virtual":[128],"hepatocytes":[129],"use":[130],"independently":[131],"configured":[132],"periportal-to-CV":[133],"gradients":[134],"exhibit":[136,172],"lobule-location":[137],"behaviors.":[139],"Employing":[140],"achieved":[142],"quantitative":[143,262],"validation":[144],"targets":[145],"acetaminophen":[147,248,282],"clearance":[148],"metabolism":[150],"but":[151],"failed":[152,217],"achieve":[154,219],"Phenomenon.":[157,222,233],"posited":[159],"that,":[160],"order":[162],"do":[164],"so,":[165],"least":[167],"one":[168,210],"additional":[169],"feature":[170,214],"must":[171],"zonation":[173],"by":[174],"decreasing":[175],"CV":[178,194,206],"direction.":[179,207],"instantiated":[181],"explored":[183],"two":[184],"alternatives:":[185],"glutathione":[188],"depletion":[189],"threshold":[190],"diminishes":[191,203],"direction;":[195],"ability":[198],"repair":[200],"mitochondrial":[201],"Inclusion":[208],"of":[209,225,243,247,256],"or":[211],"other":[213],"into":[215],"However,":[223],"inclusion":[224],"both":[226],"features":[227,246],"enabled":[228],"successfully":[229],"achieving":[230],"merged":[235,258],"provides":[237],"multilevel,":[239],"multiscale":[240],"causal":[241],"explanation":[242],"key":[244],"temporal":[245],"hepatotoxicity":[249],"mice.":[251],"discovered":[253],"variants":[255],"provide":[260],"plausible":[261],"explanations":[263],"considerable":[266],"variation":[267],"24-hour":[269],"scores":[271],"among":[272],"37":[273],"genetically":[274],"diverse":[275],"mouse":[276],"strains":[277],"following":[278],"single":[280],"toxic":[281],"dose.":[283]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":5},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":7},{"year":2017,"cited_by_count":3}],"updated_date":"2026-05-06T08:25:59.206177","created_date":"2025-10-10T00:00:00"}
